RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 SSFA2P28290 1259 aa14.16□□□□□ -0.14
SNX29-202ENST00000563308 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
SNX29-202ENST00000563308 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 ARFGEF1Q9Y6D6 1849 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 LTN1O94822 1766 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 TMEM88BA6NKF7 163 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 FBLN1P23142 703 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 SMIM5Q71RC9 77 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 IP6K1Q92551 441 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
SNX29-202ENST00000563308 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.15
SNX29-202ENST00000563308 TMF1P82094 1093 aa14.14□□□□□ -0.15
SNX29-202ENST00000563308 MCOLN1Q9GZU1 580 aa14.14□□□□□ -0.15
SNX29-202ENST00000563308 KIF13BQ9NQT8 1826 aa14.13□□□□□ -0.15
SNX29-202ENST00000563308 FYB1O15117 783 aa14.13□□□□□ -0.15
SNX29-202ENST00000563308 DEFB115Q30KQ5 88 aa14.13□□□□□ -0.15
SNX29-202ENST00000563308 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
SNX29-202ENST00000563308 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
SNX29-202ENST00000563308 PARP3Q9Y6F1 533 aa14.13□□□□□ -0.15
SNX29-202ENST00000563308 MAP3K19Q56UN5 1328 aa14.13□□□□□ -0.15
SNX29-202ENST00000563308 NSD2O96028 1365 aa14.12□□□□□ -0.15
SNX29-202ENST00000563308 LMNB1P20700 586 aa14.12□□□□□ -0.15
SNX29-202ENST00000563308 NLGN1Q8N2Q7 840 aa14.12□□□□□ -0.15
SNX29-202ENST00000563308 COG3Q96JB2 828 aa14.12□□□□□ -0.15
SNX29-202ENST00000563308 VIRMAQ69YN4 1812 aaKnown RBP14.11□□□□□ -0.15
SNX29-202ENST00000563308 C4BP0C0L5 1744 aa14.11□□□□□ -0.15
SNX29-202ENST00000563308 PALLDQ8WX93 1383 aa14.1□□□□□ -0.15
SNX29-202ENST00000563308 SBF1O95248 1867 aa14.1□□□□□ -0.15
SNX29-202ENST00000563308 HOXC9P31274 260 aa14.1□□□□□ -0.15
SNX29-202ENST00000563308 SMARCC1Q92922 1105 aaPredicted RBP14.1□□□□□ -0.15
SNX29-202ENST00000563308 CARD14Q9BXL6 1004 aa14.1□□□□□ -0.15
SNX29-202ENST00000563308 WDR33Q9C0J8 1336 aaKnown RBP14.1□□□□□ -0.15
SNX29-202ENST00000563308 TAF1LQ8IZX4 1826 aa14.09□□□□□ -0.15
SNX29-202ENST00000563308 DLL1O00548 723 aa14.09□□□□□ -0.15
SNX29-202ENST00000563308 DGKZQ13574 1117 aa14.09□□□□□ -0.15
SNX29-202ENST00000563308 PAXIP1Q6ZW49 1069 aaPredicted RBP14.09□□□□□ -0.15
SNX29-202ENST00000563308 ZCRB1Q8TBF4 217 aaKnown RBP14.09□□□□□ -0.15
SNX29-202ENST00000563308 LTV1Q96GA3 475 aaPredicted RBP14.09□□□□□ -0.15
SNX29-202ENST00000563308 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
SNX29-202ENST00000563308 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
SNX29-202ENST00000563308 RRS1Q15050 365 aaKnown RBP14.08□□□□□ -0.16
SNX29-202ENST00000563308 CDCA8Q53HL2 280 aa14.08□□□□□ -0.16
SNX29-202ENST00000563308 ABT1Q9ULW3 272 aaKnown RBP14.08□□□□□ -0.16
SNX29-202ENST00000563308 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.16
SNX29-202ENST00000563308 GNPATO15228 680 aa14.07□□□□□ -0.16
SNX29-202ENST00000563308 AMPHP49418 695 aa14.07□□□□□ -0.16
SNX29-202ENST00000563308 RASSF7Q02833 373 aa14.07□□□□□ -0.16
SNX29-202ENST00000563308 NBPF15Q8N660 670 aa14.07□□□□□ -0.16
SNX29-202ENST00000563308 RTL1A6NKG5 1358 aa14.07□□□□□ -0.16
SNX29-202ENST00000563308 TNRC18O15417 2968 aaPredicted RBP14.07□□□□□ -0.16
SNX29-202ENST00000563308 UBR3Q6ZT12 1888 aa14.06□□□□□ -0.16
SNX29-202ENST00000563308 SOX10P56693 466 aa14.06□□□□□ -0.16
SNX29-202ENST00000563308 FAM208AQ9UK61 1670 aaKnown RBP14.06□□□□□ -0.16
SNX29-202ENST00000563308 RASSF10A6NK89 507 aa14.05□□□□□ -0.16
SNX29-202ENST00000563308 KCNA3P22001 575 aa14.05□□□□□ -0.16
SNX29-202ENST00000563308 ECE1P42892 770 aa14.05□□□□□ -0.16
SNX29-202ENST00000563308 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
SNX29-202ENST00000563308 MPRIPQ6WCQ1 1025 aa14.05□□□□□ -0.16
SNX29-202ENST00000563308 AMIGO3Q86WK7 504 aa14.05□□□□□ -0.16
SNX29-202ENST00000563308 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
SNX29-202ENST00000563308 GRM1Q13255 1194 aa14.04□□□□□ -0.16
SNX29-202ENST00000563308 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
SNX29-202ENST00000563308 LDHDQ86WU2 507 aa14.04□□□□□ -0.16
SNX29-202ENST00000563308 PASKQ96RG2 1323 aa14.04□□□□□ -0.16
SNX29-202ENST00000563308 MEGF6O75095 1541 aa14.04□□□□□ -0.16
SNX29-202ENST00000563308 IQCA1LA6NCM1 817 aa14.03□□□□□ -0.16
SNX29-202ENST00000563308 POTECB2RU33 542 aa14.03□□□□□ -0.16
SNX29-202ENST00000563308 CA12O43570 354 aa14.03□□□□□ -0.16
SNX29-202ENST00000563308 HSP90AB2PQ58FF8 381 aa14.03□□□□□ -0.16
SNX29-202ENST00000563308 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
SNX29-202ENST00000563308 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
SNX29-202ENST00000563308 TSKSQ9UJT2 592 aa14.02□□□□□ -0.17
SNX29-202ENST00000563308 RGPD2P0DJD1 1756 aa14.01□□□□□ -0.17
SNX29-202ENST00000563308 TOGARAM1Q9Y4F4 1720 aa14.01□□□□□ -0.17
SNX29-202ENST00000563308 INSRP06213 1382 aa14.01□□□□□ -0.17
SNX29-202ENST00000563308 USHBP1Q8N6Y0 703 aa14.01□□□□□ -0.17
SNX29-202ENST00000563308 TIAM2Q8IVF5 1701 aa14.01□□□□□ -0.17
SNX29-202ENST00000563308 KDM6AO15550 1401 aaPredicted RBP14□□□□□ -0.17
SNX29-202ENST00000563308 FLT4P35916 1363 aa14□□□□□ -0.17
SNX29-202ENST00000563308 KIF24Q5T7B8 1368 aa14□□□□□ -0.17
SNX29-202ENST00000563308 KIF20BQ96Q89 1820 aa14□□□□□ -0.17
SNX29-202ENST00000563308 POTEIP0CG38 1075 aa14□□□□□ -0.17
SNX29-202ENST00000563308 POTEJP0CG39 1038 aa14□□□□□ -0.17
SNX29-202ENST00000563308 GPR101Q96P66 508 aaPredicted RBP14□□□□□ -0.17
SNX29-202ENST00000563308 RTCBQ9Y3I0 505 aaKnown RBP14□□□□□ -0.17
SNX29-202ENST00000563308 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
SNX29-202ENST00000563308 C4AP0C0L4 1744 aa14□□□□□ -0.17
SNX29-202ENST00000563308 HSPA5P11021 654 aaKnown RBP13.99□□□□□ -0.17
SNX29-202ENST00000563308 RFC4P35249 363 aa13.99□□□□□ -0.17
SNX29-202ENST00000563308 CHRNA5P30532 468 aa13.98□□□□□ -0.17
SNX29-202ENST00000563308 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
SNX29-202ENST00000563308 EAPPQ56P03 285 aaPredicted RBP13.98□□□□□ -0.17
SNX29-202ENST00000563308 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
SNX29-202ENST00000563308 CAPNS2Q96L46 248 aa13.98□□□□□ -0.17
SNX29-202ENST00000563308 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNX29-202ENST00000563308 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
SNX29-202ENST00000563308 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
SNX29-202ENST00000563308 CGNL1Q0VF96 1302 aa13.96□□□□□ -0.17
SNX29-202ENST00000563308 CCDC88AQ3V6T2 1871 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms