RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 MFAP1P55081 439 aaKnown RBP26.61■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 FKBP5Q13451 457 aaPredicted RBP26.61■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 CADPS2Q86UW7 1296 aa26.61■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 F6X3S4 739 aa26.6■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 TEFQ10587 303 aa26.6■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 KDM3BQ7LBC6 1761 aa26.6■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 HDGFL1Q5TGJ6 251 aa26.59■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 STRCP1A6NGW2 1772 aa26.59■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 LMTK3Q96Q04 1460 aa26.59■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 GNAI3P08754 354 aa26.58■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 GNAI2P04899 355 aa26.58■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 EIF4A1P60842 406 aaKnown RBP26.58■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 LGR6Q9HBX8 967 aa26.58■■□□□ 1.85
VPS9D1-AS1-202ENST00000562866 N4BP2Q86UW6 1770 aaPredicted RBP26.57■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 NPHP3Q7Z494 1330 aa26.57■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 PLEKHG5O94827 1062 aa26.56■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 RNMTO43148 476 aaKnown RBP26.55■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 NECTIN2Q92692 538 aa26.55■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 BTBD11A6QL63 1104 aa26.54■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 AXIN2Q9Y2T1 843 aa26.54■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 ERBB3P21860 1342 aa26.54■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 PLEKHM2Q8IWE5 1019 aa26.53■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 ABCC6O95255 1503 aa26.53■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 MPRIPQ6WCQ1 1025 aa26.52■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 TNS3Q68CZ2 1445 aa26.52■■□□□ 1.84
VPS9D1-AS1-202ENST00000562866 PXDNQ92626 1479 aa26.51■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 CDC45O75419 566 aa26.51■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 RBM25P49756 843 aaKnown RBP26.51■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 ZC3H6P61129 1189 aaKnown RBP26.51■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 PLEKHG2Q9H7P9 1386 aa26.5■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 KDM4FA0A1W2PPD8 638 aa26.5■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 TTC22Q5TAA0 569 aa26.48■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 RAPGEF4Q8WZA2 1011 aa26.48■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 TBC1D2Q9BYX2 928 aa26.48■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 RGPD5Q99666 1765 aa26.47■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 EIF2S2P20042 333 aaKnown RBP26.47■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 TBC1D9Q6ZT07 1266 aa26.47■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 ADAMTS7Q9UKP4 1686 aa26.46■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 ATP8B2P98198 1209 aa26.46■■□□□ 1.83
VPS9D1-AS1-202ENST00000562866 HSPA2P54652 639 aa26.45■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 NFKBIBQ15653 356 aa26.45■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 GSPT1P15170 499 aaKnown RBP26.44■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 PHAXQ9H814 394 aaKnown RBP26.44■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 NLRP2Q9NX02 1062 aa26.44■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.44■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 SPATA31A3Q5VYP0 1347 aa26.44■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 KCNQ3O43525 872 aa26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 UBTFL1P0CB47 393 aaPredicted RBP26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 TATP17735 454 aaPredicted RBP26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 SRCIN1Q9C0H9 1055 aa26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 CHPF2Q9P2E5 772 aa26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 SPG7Q9UQ90 795 aa26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 COL18A1P39060 1754 aa26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 DDX17Q92841 729 aaKnown RBP26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 DBF4Q9UBU7 674 aaPredicted RBP26.43■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 SIPA1L3O60292 1781 aaPredicted RBP26.42■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 C16orf71Q8IYS4 520 aaPredicted RBP26.42■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 HEG1Q9ULI3 1381 aa26.42■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 USP44Q9H0E7 712 aa26.41■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 CPDO75976 1380 aa26.41■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 SMARCA5O60264 1052 aaPredicted RBP26.41■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 APBB1O00213 710 aa26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 GIGYF1O75420 1035 aaPredicted RBP26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 DEKP35659 375 aaKnown RBP26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 CASC1Q6TDU7 716 aa26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 HSCBQ8IWL3 235 aa26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 DNAAF4Q8WXU2 420 aa26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 OSBPL3Q9H4L5 887 aa26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 LRRFIP2Q9Y608 721 aaKnown RBP26.4■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 CSB-PGBD3P0DP91 1061 aa26.39■■□□□ 1.82
VPS9D1-AS1-202ENST00000562866 CRYBG1Q9Y4K1 1723 aa26.39■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 LRRCC1Q9C099 1032 aa26.38■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 SNX21Q969T3 373 aa26.38■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 OTUD7AQ8TE49 926 aaPredicted RBP26.37■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 XIRP1Q702N8 1843 aaKnown RBP26.37■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 IBTKQ9P2D0 1353 aaPredicted RBP26.36■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 BEND3Q5T5X7 828 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 ANTXR1Q9H6X2 564 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 PNMA6EA0A0J9YXQ4 647 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 PI4KAP2A4QPH2 592 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 PHKG2P15735 406 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 IFNL2Q8IZJ0 200 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 PI4KAP1Q8N8J0 262 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 CABLES1Q8TDN4 633 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 HYPKQ9NX55 129 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 EXOC6BQ9Y2D4 811 aa26.35■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 BRINP3Q76B58 766 aa26.34■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 BCL11AQ9H165 835 aa26.34■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 SLKQ9H2G2 1235 aaPredicted RBP26.34■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 SCN11AQ9UI33 1791 aa26.34■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 MEGF6O75095 1541 aa26.33■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 SDSP20132 328 aa26.33■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 PDE1AP54750 535 aa26.33■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 SSH3Q8TE77 659 aa26.33■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 SLC52A2Q9HAB3 445 aa26.33■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 HDAC5Q9UQL6 1122 aa26.33■■□□□ 1.81
VPS9D1-AS1-202ENST00000562866 ADCY9O60503 1353 aa26.32■■□□□ 1.8
VPS9D1-AS1-202ENST00000562866 RAB11FIP3O75154 756 aa26.32■■□□□ 1.8
VPS9D1-AS1-202ENST00000562866 ALDH1L1O75891 902 aa26.32■■□□□ 1.8
VPS9D1-AS1-202ENST00000562866 HSP90AB1P08238 724 aaKnown RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms