RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 MCM10Q7L590 875 aa16.76■□□□□ 0.27
CDH11-204ENST00000562712 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
CDH11-204ENST00000562712 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
CDH11-204ENST00000562712 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
CDH11-204ENST00000562712 SCN11AQ9UI33 1791 aa16.75■□□□□ 0.27
CDH11-204ENST00000562712 DLG5Q8TDM6 1919 aa16.75■□□□□ 0.27
CDH11-204ENST00000562712 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
CDH11-204ENST00000562712 PIGBQ92521 554 aa16.75■□□□□ 0.27
CDH11-204ENST00000562712 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
CDH11-204ENST00000562712 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
CDH11-204ENST00000562712 TEFQ10587 303 aa16.74■□□□□ 0.27
CDH11-204ENST00000562712 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
CDH11-204ENST00000562712 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
CDH11-204ENST00000562712 R3HDM1Q15032 1099 aaKnown RBP16.73■□□□□ 0.27
CDH11-204ENST00000562712 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
CDH11-204ENST00000562712 PAPPAQ13219 1627 aa16.73■□□□□ 0.27
CDH11-204ENST00000562712 ITGB4P16144 1822 aa16.73■□□□□ 0.27
CDH11-204ENST00000562712 PLSCR1O15162 318 aa16.72■□□□□ 0.27
CDH11-204ENST00000562712 TAF7Q15545 349 aaPredicted RBP16.72■□□□□ 0.27
CDH11-204ENST00000562712 VIRMAQ69YN4 1812 aaKnown RBP16.71■□□□□ 0.27
CDH11-204ENST00000562712 WWC1Q8IX03 1113 aa16.71■□□□□ 0.27
CDH11-204ENST00000562712 MRC1P22897 1456 aa16.71■□□□□ 0.27
CDH11-204ENST00000562712 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
CDH11-204ENST00000562712 SMARCC1Q92922 1105 aaPredicted RBP16.7■□□□□ 0.26
CDH11-204ENST00000562712 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
CDH11-204ENST00000562712 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
CDH11-204ENST00000562712 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
CDH11-204ENST00000562712 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
CDH11-204ENST00000562712 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
CDH11-204ENST00000562712 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
CDH11-204ENST00000562712 LY75O60449 1722 aa16.67■□□□□ 0.26
CDH11-204ENST00000562712 WDR63Q8IWG1 891 aa16.67■□□□□ 0.26
CDH11-204ENST00000562712 PROM2Q8N271 834 aa16.67■□□□□ 0.26
CDH11-204ENST00000562712 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
CDH11-204ENST00000562712 SALL2Q9Y467 1007 aaPredicted RBP16.67■□□□□ 0.26
CDH11-204ENST00000562712 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
CDH11-204ENST00000562712 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
CDH11-204ENST00000562712 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
CDH11-204ENST00000562712 CHL1O00533 1208 aa16.65■□□□□ 0.26
CDH11-204ENST00000562712 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
CDH11-204ENST00000562712 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
CDH11-204ENST00000562712 IL16Q14005 1332 aa16.65■□□□□ 0.26
CDH11-204ENST00000562712 PALLDQ8WX93 1383 aa16.64■□□□□ 0.26
CDH11-204ENST00000562712 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
CDH11-204ENST00000562712 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
CDH11-204ENST00000562712 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
CDH11-204ENST00000562712 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
CDH11-204ENST00000562712 IFT57Q9NWB7 429 aa16.64■□□□□ 0.25
CDH11-204ENST00000562712 MIS18AQ9NYP9 233 aa16.64■□□□□ 0.25
CDH11-204ENST00000562712 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
CDH11-204ENST00000562712 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
CDH11-204ENST00000562712 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
CDH11-204ENST00000562712 HMGB2P26583 209 aaKnown RBP16.63■□□□□ 0.25
CDH11-204ENST00000562712 GNAI1P63096 354 aa16.63■□□□□ 0.25
CDH11-204ENST00000562712 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
CDH11-204ENST00000562712 SIK1P57059 783 aa16.62■□□□□ 0.25
CDH11-204ENST00000562712 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDH11-204ENST00000562712 VSIG10Q8N0Z9 540 aa16.62■□□□□ 0.25
CDH11-204ENST00000562712 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
CDH11-204ENST00000562712 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
CDH11-204ENST00000562712 KCNQ3O43525 872 aa16.61■□□□□ 0.25
CDH11-204ENST00000562712 PTCD1O75127 700 aaKnown RBP16.61■□□□□ 0.25
CDH11-204ENST00000562712 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
CDH11-204ENST00000562712 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
CDH11-204ENST00000562712 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
CDH11-204ENST00000562712 CCNL1Q9UK58 526 aaPredicted RBP16.6■□□□□ 0.25
CDH11-204ENST00000562712 ATP6V1AP38606 617 aa16.59■□□□□ 0.25
CDH11-204ENST00000562712 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
CDH11-204ENST00000562712 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
CDH11-204ENST00000562712 SLC4A9Q96Q91 983 aa16.59■□□□□ 0.25
CDH11-204ENST00000562712 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
CDH11-204ENST00000562712 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
CDH11-204ENST00000562712 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
CDH11-204ENST00000562712 KCPQ6ZWJ8 1503 aa16.58■□□□□ 0.24
CDH11-204ENST00000562712 ZNF831Q5JPB2 1677 aa16.58■□□□□ 0.24
CDH11-204ENST00000562712 UBR2Q8IWV8 1755 aa16.58■□□□□ 0.24
CDH11-204ENST00000562712 TAF1LQ8IZX4 1826 aa16.57■□□□□ 0.24
CDH11-204ENST00000562712 KDM3BQ7LBC6 1761 aa16.57■□□□□ 0.24
CDH11-204ENST00000562712 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
CDH11-204ENST00000562712 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
CDH11-204ENST00000562712 C5P01031 1676 aa16.56■□□□□ 0.24
CDH11-204ENST00000562712 E9PSI1 815 aa16.56■□□□□ 0.24
CDH11-204ENST00000562712 KCNQ4P56696 695 aa16.56■□□□□ 0.24
CDH11-204ENST00000562712 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
CDH11-204ENST00000562712 MYH16Q9H6N6 1097 aa16.56■□□□□ 0.24
CDH11-204ENST00000562712 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
CDH11-204ENST00000562712 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
CDH11-204ENST00000562712 GIGYF1O75420 1035 aaPredicted RBP16.55■□□□□ 0.24
CDH11-204ENST00000562712 ITPK1Q13572 414 aa16.55■□□□□ 0.24
CDH11-204ENST00000562712 SLC15A2Q16348 729 aa16.55■□□□□ 0.24
CDH11-204ENST00000562712 STK32BQ9NY57 414 aa16.55■□□□□ 0.24
CDH11-204ENST00000562712 COL24A1Q17RW2 1714 aa16.55■□□□□ 0.24
CDH11-204ENST00000562712 SLFN5Q08AF3 891 aa16.54■□□□□ 0.24
CDH11-204ENST00000562712 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
CDH11-204ENST00000562712 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
CDH11-204ENST00000562712 STARD3NLO95772 234 aa16.53■□□□□ 0.24
CDH11-204ENST00000562712 ZNF827Q17R98 1081 aa16.53■□□□□ 0.24
CDH11-204ENST00000562712 RC3H1Q5TC82 1133 aaKnown RBP16.53■□□□□ 0.24
CDH11-204ENST00000562712 DNAJC10Q8IXB1 793 aa16.53■□□□□ 0.24
CDH11-204ENST00000562712 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms