RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 ANKRD26Q9UPS8 1709 aa9.43□□□□□ -0.9
CFDP1-202ENST00000562602 ARHGEF40Q8TER5 1519 aa9.43□□□□□ -0.9
CFDP1-202ENST00000562602 AATKQ6ZMQ8 1374 aa9.43□□□□□ -0.9
CFDP1-202ENST00000562602 GNAI1P63096 354 aa9.43□□□□□ -0.9
CFDP1-202ENST00000562602 EXOSC9Q06265 439 aaKnown RBP9.43□□□□□ -0.9
CFDP1-202ENST00000562602 PDIA6Q15084 440 aa9.43□□□□□ -0.9
CFDP1-202ENST00000562602 WNT2BQ93097 391 aa9.43□□□□□ -0.9
CFDP1-202ENST00000562602 GGNBP2Q9H3C7 697 aa9.43□□□□□ -0.9
CFDP1-202ENST00000562602 ALKQ9UM73 1620 aa9.42□□□□□ -0.9
CFDP1-202ENST00000562602 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
CFDP1-202ENST00000562602 KIF24Q5T7B8 1368 aa9.42□□□□□ -0.9
CFDP1-202ENST00000562602 USP19O94966 1318 aa9.42□□□□□ -0.9
CFDP1-202ENST00000562602 MINK1Q8N4C8 1332 aaPredicted RBP9.42□□□□□ -0.9
CFDP1-202ENST00000562602 RLBP1P12271 317 aa9.42□□□□□ -0.9
CFDP1-202ENST00000562602 SMC5Q8IY18 1101 aa9.42□□□□□ -0.9
CFDP1-202ENST00000562602 VIRMAQ69YN4 1812 aaKnown RBP9.42□□□□□ -0.9
CFDP1-202ENST00000562602 CD163L1Q9NR16 1453 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
CFDP1-202ENST00000562602 TRIM27P14373 513 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
CFDP1-202ENST00000562602 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 ITPRIPQ8IWB1 547 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 SSH1Q8WYL5 1049 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 GCC1Q96CN9 775 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 RBM33Q96EV2 1170 aaKnown RBP9.41□□□□□ -0.9
CFDP1-202ENST00000562602 NBPF3Q9H094 633 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 IFT57Q9NWB7 429 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
CFDP1-202ENST00000562602 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
CFDP1-202ENST00000562602 FAM135BQ49AJ0 1406 aa9.4□□□□□ -0.9
CFDP1-202ENST00000562602 YEATS2Q9ULM3 1422 aa9.4□□□□□ -0.9
CFDP1-202ENST00000562602 PTMSP20962 102 aa9.4□□□□□ -0.9
CFDP1-202ENST00000562602 E2F4Q16254 413 aa9.4□□□□□ -0.9
CFDP1-202ENST00000562602 L1TD1Q5T7N2 865 aaKnown RBP9.4□□□□□ -0.9
CFDP1-202ENST00000562602 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
CFDP1-202ENST00000562602 ZBTB40Q9NUA8 1239 aa9.4□□□□□ -0.9
CFDP1-202ENST00000562602 NOB1Q9ULX3 412 aaKnown RBP9.4□□□□□ -0.9
CFDP1-202ENST00000562602 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
CFDP1-202ENST00000562602 SPATA31D1Q6ZQQ2 1576 aa9.39□□□□□ -0.91
CFDP1-202ENST00000562602 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
CFDP1-202ENST00000562602 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
CFDP1-202ENST00000562602 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
CFDP1-202ENST00000562602 SAFB2Q14151 953 aaKnown RBP eCLIP9.39□□□□□ -0.91
CFDP1-202ENST00000562602 API5Q9BZZ5 524 aaKnown RBP9.39□□□□□ -0.91
CFDP1-202ENST00000562602 RSPH6AQ9H0K4 717 aa9.39□□□□□ -0.91
CFDP1-202ENST00000562602 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
CFDP1-202ENST00000562602 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
CFDP1-202ENST00000562602 NUCB1Q02818 461 aa9.38□□□□□ -0.91
CFDP1-202ENST00000562602 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
CFDP1-202ENST00000562602 TSR2Q969E8 191 aaKnown RBP9.38□□□□□ -0.91
CFDP1-202ENST00000562602 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
CFDP1-202ENST00000562602 C22orf23Q9BZE7 217 aa9.38□□□□□ -0.91
CFDP1-202ENST00000562602 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
CFDP1-202ENST00000562602 POLKQ9UBT6 870 aa9.38□□□□□ -0.91
CFDP1-202ENST00000562602 A2ML1A8K2U0 1454 aa9.38□□□□□ -0.91
CFDP1-202ENST00000562602 CDK12Q9NYV4 1490 aaPredicted RBP9.38□□□□□ -0.91
CFDP1-202ENST00000562602 CFAP65Q6ZU64 1925 aaKnown RBP9.38□□□□□ -0.91
CFDP1-202ENST00000562602 CPSF1Q10570 1443 aaKnown RBP9.38□□□□□ -0.91
CFDP1-202ENST00000562602 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
CFDP1-202ENST00000562602 PRKAR2BP31323 418 aa9.37□□□□□ -0.91
CFDP1-202ENST00000562602 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
CFDP1-202ENST00000562602 COG3Q96JB2 828 aa9.37□□□□□ -0.91
CFDP1-202ENST00000562602 CHMP5Q9NZZ3 219 aa9.37□□□□□ -0.91
CFDP1-202ENST00000562602 ISY1Q9ULR0 285 aaKnown RBP9.37□□□□□ -0.91
CFDP1-202ENST00000562602 TECPR2O15040 1411 aa9.37□□□□□ -0.91
CFDP1-202ENST00000562602 TRIM6-TRIM34B2RNG4 842 aa9.36□□□□□ -0.91
CFDP1-202ENST00000562602 FRAT2O75474 233 aaPredicted RBP9.36□□□□□ -0.91
CFDP1-202ENST00000562602 ZNF853P0CG23 659 aa9.36□□□□□ -0.91
CFDP1-202ENST00000562602 BMP2KLQ5H9B9 411 aa9.36□□□□□ -0.91
CFDP1-202ENST00000562602 HSCBQ8IWL3 235 aa9.36□□□□□ -0.91
CFDP1-202ENST00000562602 TMEM57Q8N5G2 664 aa9.36□□□□□ -0.91
CFDP1-202ENST00000562602 SNX21Q969T3 373 aa9.36□□□□□ -0.91
CFDP1-202ENST00000562602 KIF20BQ96Q89 1820 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 VAMP4O75379 141 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 IL13P35225 146 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
CFDP1-202ENST00000562602 PTCH1Q13635 1447 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
CFDP1-202ENST00000562602 LAPTM4BQ86VI4 370 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 CHD1LQ86WJ1 897 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 TBC1D2Q9BYX2 928 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 ANTXR1Q9H6X2 564 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
CFDP1-202ENST00000562602 BCAMP50895 628 aa9.34□□□□□ -0.91
CFDP1-202ENST00000562602 ZFRQ96KR1 1074 aaKnown RBP9.34□□□□□ -0.91
CFDP1-202ENST00000562602 SEPT9Q9UHD8 586 aaPredicted RBP9.34□□□□□ -0.91
CFDP1-202ENST00000562602 SOWAHBA6NEL2 793 aa9.33□□□□□ -0.92
CFDP1-202ENST00000562602 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
CFDP1-202ENST00000562602 ZBTB7BO15156 539 aaPredicted RBP9.33□□□□□ -0.92
CFDP1-202ENST00000562602 IL27Q8NEV9 243 aa9.33□□□□□ -0.92
CFDP1-202ENST00000562602 NUDT16Q96DE0 195 aaKnown RBP9.33□□□□□ -0.92
CFDP1-202ENST00000562602 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
CFDP1-202ENST00000562602 TNNQ9UQP3 1299 aa9.33□□□□□ -0.92
CFDP1-202ENST00000562602 ABCC4O15439 1325 aa9.32□□□□□ -0.92
CFDP1-202ENST00000562602 LRRC7Q96NW7 1537 aa9.32□□□□□ -0.92
CFDP1-202ENST00000562602 OSBPP22059 807 aa9.32□□□□□ -0.92
CFDP1-202ENST00000562602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.32□□□□□ -0.92
CFDP1-202ENST00000562602 ANKK1Q8NFD2 765 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms