RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 TOGARAM1Q9Y4F4 1720 aa21.8■■□□□ 1.08
PKD1-226ENST00000562425 UTRNP46939 3433 aa21.8■■□□□ 1.08
PKD1-226ENST00000562425 GNAT3A8MTJ3 354 aa21.8■■□□□ 1.08
PKD1-226ENST00000562425 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
PKD1-226ENST00000562425 QSER1Q2KHR3 1735 aa21.8■■□□□ 1.08
PKD1-226ENST00000562425 ITGB4P16144 1822 aa21.79■■□□□ 1.08
PKD1-226ENST00000562425 RNMTO43148 476 aaKnown RBP21.79■■□□□ 1.08
PKD1-226ENST00000562425 ANP32CO43423 234 aa21.79■■□□□ 1.08
PKD1-226ENST00000562425 NFATC2IPQ8NCF5 419 aa21.79■■□□□ 1.08
PKD1-226ENST00000562425 ARXQ96QS3 562 aa21.78■■□□□ 1.08
PKD1-226ENST00000562425 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
PKD1-226ENST00000562425 WDR43Q15061 677 aaKnown RBP eCLIP21.77■■□□□ 1.08
PKD1-226ENST00000562425 LGR6Q9HBX8 967 aa21.77■■□□□ 1.08
PKD1-226ENST00000562425 ATG3Q9NT62 314 aa21.77■■□□□ 1.08
PKD1-226ENST00000562425 SLC16A10Q8TF71 515 aa21.76■■□□□ 1.07
PKD1-226ENST00000562425 SLC52A2Q9HAB3 445 aa21.76■■□□□ 1.07
PKD1-226ENST00000562425 KCNQ4P56696 695 aa21.75■■□□□ 1.07
PKD1-226ENST00000562425 ZNF784Q8NCA9 323 aaPredicted RBP21.75■■□□□ 1.07
PKD1-226ENST00000562425 RTF1Q92541 710 aaKnown RBP21.75■■□□□ 1.07
PKD1-226ENST00000562425 MAPK8IP3Q9UPT6 1336 aa21.75■■□□□ 1.07
PKD1-226ENST00000562425 LY75O60449 1722 aa21.75■■□□□ 1.07
PKD1-226ENST00000562425 LOC102724428A0A0B4J2F2 783 aa21.74■■□□□ 1.07
PKD1-226ENST00000562425 SIK1P57059 783 aa21.74■■□□□ 1.07
PKD1-226ENST00000562425 TEFQ10587 303 aa21.74■■□□□ 1.07
PKD1-226ENST00000562425 ZNF827Q17R98 1081 aa21.74■■□□□ 1.07
PKD1-226ENST00000562425 HTATSF1O43719 755 aaKnown RBP21.73■■□□□ 1.07
PKD1-226ENST00000562425 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
PKD1-226ENST00000562425 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
PKD1-226ENST00000562425 AKT1S1Q96B36 256 aa21.72■■□□□ 1.07
PKD1-226ENST00000562425 PLEKHF1Q96S99 279 aa21.72■■□□□ 1.07
PKD1-226ENST00000562425 SCN11AQ9UI33 1791 aa21.71■■□□□ 1.07
PKD1-226ENST00000562425 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
PKD1-226ENST00000562425 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
PKD1-226ENST00000562425 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
PKD1-226ENST00000562425 POLD1P28340 1107 aa21.69■■□□□ 1.06
PKD1-226ENST00000562425 PTCD1O75127 700 aaKnown RBP21.68■■□□□ 1.06
PKD1-226ENST00000562425 NFE2L2Q16236 605 aa21.68■■□□□ 1.06
PKD1-226ENST00000562425 MRC1P22897 1456 aa21.68■■□□□ 1.06
PKD1-226ENST00000562425 ADAMTS7Q9UKP4 1686 aa21.67■■□□□ 1.06
PKD1-226ENST00000562425 CEMIPQ8WUJ3 1361 aa21.67■■□□□ 1.06
PKD1-226ENST00000562425 ADAMTS8Q9UP79 889 aa21.67■■□□□ 1.06
PKD1-226ENST00000562425 TUBGCP6Q96RT7 1819 aa21.66■■□□□ 1.06
PKD1-226ENST00000562425 PNPLA7Q6ZV29 1317 aa21.66■■□□□ 1.06
PKD1-226ENST00000562425 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
PKD1-226ENST00000562425 FLAD1Q8NFF5 587 aa21.66■■□□□ 1.06
PKD1-226ENST00000562425 AK7Q96M32 723 aa21.66■■□□□ 1.06
PKD1-226ENST00000562425 ITPK1Q13572 414 aa21.65■■□□□ 1.06
PKD1-226ENST00000562425 RUNDC1Q96C34 613 aa21.65■■□□□ 1.06
PKD1-226ENST00000562425 MCM10Q7L590 875 aa21.64■■□□□ 1.05
PKD1-226ENST00000562425 GOLGB1Q14789 3259 aaKnown RBP21.64■■□□□ 1.05
PKD1-226ENST00000562425 SLC39A6Q13433 755 aa21.63■■□□□ 1.05
PKD1-226ENST00000562425 GPR162Q16538 588 aa21.63■■□□□ 1.05
PKD1-226ENST00000562425 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
PKD1-226ENST00000562425 SLC4A9Q96Q91 983 aa21.63■■□□□ 1.05
PKD1-226ENST00000562425 BTBD11A6QL63 1104 aa21.62■■□□□ 1.05
PKD1-226ENST00000562425 LMOD3Q0VAK6 560 aa21.62■■□□□ 1.05
PKD1-226ENST00000562425 C5P01031 1676 aa21.62■■□□□ 1.05
PKD1-226ENST00000562425 RIPK4P57078 832 aa21.61■■□□□ 1.05
PKD1-226ENST00000562425 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
PKD1-226ENST00000562425 RC3H1Q5TC82 1133 aaKnown RBP21.61■■□□□ 1.05
PKD1-226ENST00000562425 ZNF790Q6PG37 636 aa21.61■■□□□ 1.05
PKD1-226ENST00000562425 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
PKD1-226ENST00000562425 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
PKD1-226ENST00000562425 MSH5O43196 834 aa21.6■■□□□ 1.05
PKD1-226ENST00000562425 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
PKD1-226ENST00000562425 TAF7Q15545 349 aaPredicted RBP21.6■■□□□ 1.05
PKD1-226ENST00000562425 VSIG10Q8N0Z9 540 aa21.6■■□□□ 1.05
PKD1-226ENST00000562425 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
PKD1-226ENST00000562425 PNISRQ8TF01 805 aaKnown RBP21.59■■□□□ 1.05
PKD1-226ENST00000562425 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
PKD1-226ENST00000562425 CNTNAP4Q9C0A0 1308 aa21.58■■□□□ 1.05
PKD1-226ENST00000562425 C4BP0C0L5 1744 aa21.58■■□□□ 1.05
PKD1-226ENST00000562425 TAF1LQ8IZX4 1826 aa21.58■■□□□ 1.05
PKD1-226ENST00000562425 GNPATO15228 680 aa21.58■■□□□ 1.05
PKD1-226ENST00000562425 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
PKD1-226ENST00000562425 FMNL2Q96PY5 1086 aa21.58■■□□□ 1.05
PKD1-226ENST00000562425 SSFA2P28290 1259 aa21.57■■□□□ 1.04
PKD1-226ENST00000562425 C1QTNF8P60827 252 aa21.57■■□□□ 1.04
PKD1-226ENST00000562425 COL23A1Q86Y22 540 aaPredicted RBP21.57■■□□□ 1.04
PKD1-226ENST00000562425 KLHL34Q8N239 644 aa21.57■■□□□ 1.04
PKD1-226ENST00000562425 TEX13AQ9BXU3 409 aaPredicted RBP21.57■■□□□ 1.04
PKD1-226ENST00000562425 RTCBQ9Y3I0 505 aaKnown RBP21.57■■□□□ 1.04
PKD1-226ENST00000562425 NEUROD2Q15784 382 aa21.56■■□□□ 1.04
PKD1-226ENST00000562425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
PKD1-226ENST00000562425 DNAJC10Q8IXB1 793 aa21.55■■□□□ 1.04
PKD1-226ENST00000562425 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
PKD1-226ENST00000562425 RRP7AQ9Y3A4 280 aaKnown RBP21.55■■□□□ 1.04
PKD1-226ENST00000562425 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
PKD1-226ENST00000562425 PHF14O94880 888 aa21.54■■□□□ 1.04
PKD1-226ENST00000562425 STARD3NLO95772 234 aa21.54■■□□□ 1.04
PKD1-226ENST00000562425 CRKLP46109 303 aaKnown RBP21.54■■□□□ 1.04
PKD1-226ENST00000562425 TRAPPC3LQ5T215 181 aa21.54■■□□□ 1.04
PKD1-226ENST00000562425 KCPQ6ZWJ8 1503 aa21.54■■□□□ 1.04
PKD1-226ENST00000562425 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
PKD1-226ENST00000562425 GRIN3BO60391 1043 aa21.53■■□□□ 1.04
PKD1-226ENST00000562425 ADRA2BP18089 450 aa21.53■■□□□ 1.04
PKD1-226ENST00000562425 SIPA1L3O60292 1781 aaPredicted RBP21.53■■□□□ 1.04
PKD1-226ENST00000562425 SENP3-EIF4A1A0A087X0R7 540 aa21.52■■□□□ 1.04
PKD1-226ENST00000562425 CYP19A1P11511 503 aaPredicted RBP21.52■■□□□ 1.04
PKD1-226ENST00000562425 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms