RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 LINC00116Q8NCU8 138 aa28.3■■■□□ 2.12
NR4A1-219ENST00000562373 TAF1LQ8IZX4 1826 aa28.29■■■□□ 2.12
NR4A1-219ENST00000562373 AMIGO3Q86WK7 504 aa28.29■■■□□ 2.12
NR4A1-219ENST00000562373 SLC4A9Q96Q91 983 aa28.29■■■□□ 2.12
NR4A1-219ENST00000562373 RNMTO43148 476 aaKnown RBP28.28■■■□□ 2.12
NR4A1-219ENST00000562373 SGIP1Q9BQI5 828 aa28.28■■■□□ 2.12
NR4A1-219ENST00000562373 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.11
NR4A1-219ENST00000562373 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.11
NR4A1-219ENST00000562373 PHACTR3Q96KR7 559 aa28.26■■■□□ 2.11
NR4A1-219ENST00000562373 AK7Q96M32 723 aa28.26■■■□□ 2.11
NR4A1-219ENST00000562373 NUDCQ9Y266 331 aa28.26■■■□□ 2.11
NR4A1-219ENST00000562373 PRKAR2BP31323 418 aa28.25■■■□□ 2.11
NR4A1-219ENST00000562373 RSPH6AQ9H0K4 717 aa28.25■■■□□ 2.11
NR4A1-219ENST00000562373 QSER1Q2KHR3 1735 aa28.25■■■□□ 2.11
NR4A1-219ENST00000562373 C4BP0C0L5 1744 aa28.24■■■□□ 2.11
NR4A1-219ENST00000562373 PTCD1O75127 700 aaKnown RBP28.24■■■□□ 2.11
NR4A1-219ENST00000562373 PHF14O94880 888 aa28.24■■■□□ 2.11
NR4A1-219ENST00000562373 SLC16A10Q8TF71 515 aa28.24■■■□□ 2.11
NR4A1-219ENST00000562373 SCN11AQ9UI33 1791 aa28.24■■■□□ 2.11
NR4A1-219ENST00000562373 SLC52A2Q9HAB3 445 aa28.23■■■□□ 2.11
NR4A1-219ENST00000562373 MSL1Q68DK7 614 aa28.22■■■□□ 2.11
NR4A1-219ENST00000562373 ARXQ96QS3 562 aa28.21■■■□□ 2.11
NR4A1-219ENST00000562373 SLC39A6Q13433 755 aa28.2■■■□□ 2.1
NR4A1-219ENST00000562373 ZEB1P37275 1124 aaPredicted RBP28.19■■■□□ 2.1
NR4A1-219ENST00000562373 FHDC1Q9C0D6 1143 aaPredicted RBP28.19■■■□□ 2.1
NR4A1-219ENST00000562373 GNPATO15228 680 aa28.18■■■□□ 2.1
NR4A1-219ENST00000562373 IL17REQ8NFR9 667 aa28.18■■■□□ 2.1
NR4A1-219ENST00000562373 GAS2L2Q8NHY3 880 aa28.18■■■□□ 2.1
NR4A1-219ENST00000562373 VIRMAQ69YN4 1812 aaKnown RBP28.18■■■□□ 2.1
NR4A1-219ENST00000562373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.17■■■□□ 2.1
NR4A1-219ENST00000562373 HMGB2P26583 209 aaKnown RBP28.17■■■□□ 2.1
NR4A1-219ENST00000562373 GNAT3A8MTJ3 354 aa28.16■■■□□ 2.1
NR4A1-219ENST00000562373 FLAD1Q8NFF5 587 aa28.16■■■□□ 2.1
NR4A1-219ENST00000562373 MAP3K5Q99683 1374 aa28.15■■■□□ 2.1
NR4A1-219ENST00000562373 FCHSD2O94868 740 aa28.15■■■□□ 2.1
NR4A1-219ENST00000562373 POLD1P28340 1107 aa28.15■■■□□ 2.1
NR4A1-219ENST00000562373 KLHL34Q8N239 644 aa28.15■■■□□ 2.1
NR4A1-219ENST00000562373 SYT17Q9BSW7 474 aa28.15■■■□□ 2.1
NR4A1-219ENST00000562373 UBR3Q6ZT12 1888 aa28.15■■■□□ 2.1
NR4A1-219ENST00000562373 RALBP1Q15311 655 aa28.13■■■□□ 2.09
NR4A1-219ENST00000562373 SSFA2P28290 1259 aa28.11■■■□□ 2.09
NR4A1-219ENST00000562373 ADAMTS7Q9UKP4 1686 aa28.1■■■□□ 2.09
NR4A1-219ENST00000562373 MRC1P22897 1456 aa28.1■■■□□ 2.09
NR4A1-219ENST00000562373 DNAJC10Q8IXB1 793 aa28.09■■■□□ 2.09
NR4A1-219ENST00000562373 RTCBQ9Y3I0 505 aaKnown RBP28.09■■■□□ 2.09
NR4A1-219ENST00000562373 COL24A1Q17RW2 1714 aa28.09■■■□□ 2.09
NR4A1-219ENST00000562373 TEFQ10587 303 aa28.08■■■□□ 2.09
NR4A1-219ENST00000562373 RC3H1Q5TC82 1133 aaKnown RBP28.08■■■□□ 2.09
NR4A1-219ENST00000562373 CRKLP46109 303 aaKnown RBP28.07■■■□□ 2.08
NR4A1-219ENST00000562373 DCTN1Q14203 1278 aa28.07■■■□□ 2.08
NR4A1-219ENST00000562373 TRAPPC3LQ5T215 181 aa28.07■■■□□ 2.08
NR4A1-219ENST00000562373 MYH14Q7Z406 1995 aaKnown RBP28.07■■■□□ 2.08
NR4A1-219ENST00000562373 ZNF831Q5JPB2 1677 aa28.07■■■□□ 2.08
NR4A1-219ENST00000562373 COL5A3P25940 1745 aaPredicted RBP28.06■■■□□ 2.08
NR4A1-219ENST00000562373 RPS6KA4O75676 772 aa28.06■■■□□ 2.08
NR4A1-219ENST00000562373 MCM10Q7L590 875 aa28.06■■■□□ 2.08
NR4A1-219ENST00000562373 ARHGEF1Q92888 912 aaKnown RBP28.06■■■□□ 2.08
NR4A1-219ENST00000562373 CNTNAP4Q9C0A0 1308 aa28.06■■■□□ 2.08
NR4A1-219ENST00000562373 TJP1Q07157 1748 aa28.04■■■□□ 2.08
NR4A1-219ENST00000562373 KCNQ3O43525 872 aa28.03■■■□□ 2.08
NR4A1-219ENST00000562373 INTS5Q6P9B9 1019 aaKnown RBP28.03■■■□□ 2.08
NR4A1-219ENST00000562373 PLEKHF1Q96S99 279 aa28.03■■■□□ 2.08
NR4A1-219ENST00000562373 KCPQ6ZWJ8 1503 aa28.02■■■□□ 2.08
NR4A1-219ENST00000562373 MYBBP1AQ9BQG0 1328 aaKnown RBP28.02■■■□□ 2.08
NR4A1-219ENST00000562373 TTC5Q8N0Z6 440 aa28.02■■■□□ 2.08
NR4A1-219ENST00000562373 NLGN2Q8NFZ4 835 aa28.02■■■□□ 2.08
NR4A1-219ENST00000562373 RTF1Q92541 710 aaKnown RBP28.02■■■□□ 2.08
NR4A1-219ENST00000562373 CEMIPQ8WUJ3 1361 aa28.01■■■□□ 2.07
NR4A1-219ENST00000562373 CYP19A1P11511 503 aaPredicted RBP28■■■□□ 2.07
NR4A1-219ENST00000562373 ZNF790Q6PG37 636 aa28■■■□□ 2.07
NR4A1-219ENST00000562373 ZNF496Q96IT1 587 aaPredicted RBP28■■■□□ 2.07
NR4A1-219ENST00000562373 DCAF8L1A6NGE4 600 aa27.99■■■□□ 2.07
NR4A1-219ENST00000562373 BTBD11A6QL63 1104 aa27.99■■■□□ 2.07
NR4A1-219ENST00000562373 RFC4P35249 363 aa27.99■■■□□ 2.07
NR4A1-219ENST00000562373 PRKRIP1Q9H875 184 aaPredicted RBP27.98■■■□□ 2.07
NR4A1-219ENST00000562373 CCDC87Q9NVE4 849 aa27.98■■■□□ 2.07
NR4A1-219ENST00000562373 SIPA1L3O60292 1781 aaPredicted RBP27.97■■■□□ 2.07
NR4A1-219ENST00000562373 NEFMP07197 916 aa27.97■■■□□ 2.07
NR4A1-219ENST00000562373 SRP68Q9UHB9 627 aaKnown RBP27.97■■■□□ 2.07
NR4A1-219ENST00000562373 GYS1P13807 737 aa27.95■■■□□ 2.06
NR4A1-219ENST00000562373 ADRA2BP18089 450 aa27.95■■■□□ 2.06
NR4A1-219ENST00000562373 VSIG10Q8N0Z9 540 aa27.95■■■□□ 2.06
NR4A1-219ENST00000562373 ZBTB1Q9Y2K1 713 aa27.95■■■□□ 2.06
NR4A1-219ENST00000562373 UBR2Q8IWV8 1755 aa27.94■■■□□ 2.06
NR4A1-219ENST00000562373 MIS18AQ9NYP9 233 aa27.94■■■□□ 2.06
NR4A1-219ENST00000562373 ZNF316A6NFI3 1004 aaPredicted RBP27.93■■■□□ 2.06
NR4A1-219ENST00000562373 HTATSF1O43719 755 aaKnown RBP27.93■■■□□ 2.06
NR4A1-219ENST00000562373 MMP10P09238 476 aa27.93■■■□□ 2.06
NR4A1-219ENST00000562373 CANXP27824 592 aaKnown RBP27.93■■■□□ 2.06
NR4A1-219ENST00000562373 NFE2L2Q16236 605 aa27.93■■■□□ 2.06
NR4A1-219ENST00000562373 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
NR4A1-219ENST00000562373 THUMPD2Q9BTF0 503 aaKnown RBP27.93■■■□□ 2.06
NR4A1-219ENST00000562373 HEG1Q9ULI3 1381 aa27.93■■■□□ 2.06
NR4A1-219ENST00000562373 CICQ96RK0 1608 aaPredicted RBP27.92■■■□□ 2.06
NR4A1-219ENST00000562373 PNNQ9H307 717 aaKnown RBP27.92■■■□□ 2.06
NR4A1-219ENST00000562373 MAPK8IP3Q9UPT6 1336 aa27.92■■■□□ 2.06
NR4A1-219ENST00000562373 DLG5Q8TDM6 1919 aa27.91■■■□□ 2.06
NR4A1-219ENST00000562373 CCDC146Q8IYE0 955 aa27.91■■■□□ 2.06
NR4A1-219ENST00000562373 FMNL2Q96PY5 1086 aa27.91■■■□□ 2.06
NR4A1-219ENST00000562373 SOS1Q07889 1333 aaPredicted RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms