RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
CDH1-204ENST00000562118 SLC52A2Q9HAB3 445 aa17.82■□□□□ 0.44
CDH1-204ENST00000562118 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
CDH1-204ENST00000562118 PALLDQ8WX93 1383 aa17.81■□□□□ 0.44
CDH1-204ENST00000562118 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
CDH1-204ENST00000562118 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
CDH1-204ENST00000562118 TUBGCP6Q96RT7 1819 aa17.81■□□□□ 0.44
CDH1-204ENST00000562118 TXNRD1Q16881 649 aa17.8■□□□□ 0.44
CDH1-204ENST00000562118 SLC27A3Q5K4L6 730 aa17.8■□□□□ 0.44
CDH1-204ENST00000562118 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
CDH1-204ENST00000562118 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
CDH1-204ENST00000562118 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
CDH1-204ENST00000562118 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
CDH1-204ENST00000562118 SMARCC1Q92922 1105 aaPredicted RBP17.79■□□□□ 0.44
CDH1-204ENST00000562118 SYTL4Q96C24 671 aaPredicted RBP17.79■□□□□ 0.44
CDH1-204ENST00000562118 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
CDH1-204ENST00000562118 LRRC4BQ9NT99 713 aa17.78■□□□□ 0.44
CDH1-204ENST00000562118 CASZ1Q86V15 1759 aa17.78■□□□□ 0.44
CDH1-204ENST00000562118 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
CDH1-204ENST00000562118 CABP4P57796 275 aa17.77■□□□□ 0.44
CDH1-204ENST00000562118 NFATC2IPQ8NCF5 419 aa17.77■□□□□ 0.44
CDH1-204ENST00000562118 ASAP1Q9ULH1 1129 aa17.77■□□□□ 0.44
CDH1-204ENST00000562118 UBR3Q6ZT12 1888 aa17.76■□□□□ 0.43
CDH1-204ENST00000562118 NEFMP07197 916 aa17.76■□□□□ 0.43
CDH1-204ENST00000562118 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
CDH1-204ENST00000562118 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
CDH1-204ENST00000562118 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
CDH1-204ENST00000562118 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
CDH1-204ENST00000562118 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
CDH1-204ENST00000562118 SIK1P57059 783 aa17.73■□□□□ 0.43
CDH1-204ENST00000562118 MCM10Q7L590 875 aa17.73■□□□□ 0.43
CDH1-204ENST00000562118 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
CDH1-204ENST00000562118 LAMB4A4D0S4 1761 aa17.73■□□□□ 0.43
CDH1-204ENST00000562118 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
CDH1-204ENST00000562118 RIPK4P57078 832 aa17.72■□□□□ 0.43
CDH1-204ENST00000562118 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
CDH1-204ENST00000562118 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
CDH1-204ENST00000562118 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
CDH1-204ENST00000562118 HEG1Q9ULI3 1381 aa17.71■□□□□ 0.43
CDH1-204ENST00000562118 HMGB2P26583 209 aaKnown RBP17.71■□□□□ 0.43
CDH1-204ENST00000562118 DCTN1Q14203 1278 aa17.71■□□□□ 0.43
CDH1-204ENST00000562118 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
CDH1-204ENST00000562118 CCNL1Q9UK58 526 aaPredicted RBP17.71■□□□□ 0.43
CDH1-204ENST00000562118 APAF1O14727 1248 aa17.7■□□□□ 0.42
CDH1-204ENST00000562118 TEFQ10587 303 aa17.7■□□□□ 0.42
CDH1-204ENST00000562118 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
CDH1-204ENST00000562118 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
CDH1-204ENST00000562118 BABAM1Q9NWV8 329 aa17.7■□□□□ 0.42
CDH1-204ENST00000562118 ITPK1Q13572 414 aa17.69■□□□□ 0.42
CDH1-204ENST00000562118 TAF7Q15545 349 aaPredicted RBP17.68■□□□□ 0.42
CDH1-204ENST00000562118 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
CDH1-204ENST00000562118 MIER1Q8N108 512 aa17.68■□□□□ 0.42
CDH1-204ENST00000562118 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
CDH1-204ENST00000562118 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
CDH1-204ENST00000562118 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
CDH1-204ENST00000562118 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
CDH1-204ENST00000562118 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
CDH1-204ENST00000562118 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
CDH1-204ENST00000562118 LRP5O75197 1615 aa17.66■□□□□ 0.42
CDH1-204ENST00000562118 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
CDH1-204ENST00000562118 NGEFQ8N5V2 710 aa17.66■□□□□ 0.42
CDH1-204ENST00000562118 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
CDH1-204ENST00000562118 ZNF853P0CG23 659 aa17.65■□□□□ 0.42
CDH1-204ENST00000562118 KCNQ4P56696 695 aa17.65■□□□□ 0.42
CDH1-204ENST00000562118 RC3H1Q5TC82 1133 aaKnown RBP17.65■□□□□ 0.42
CDH1-204ENST00000562118 NBPF14Q5TI25 921 aa17.65■□□□□ 0.42
CDH1-204ENST00000562118 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
CDH1-204ENST00000562118 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.42
CDH1-204ENST00000562118 CHL1O00533 1208 aa17.64■□□□□ 0.41
CDH1-204ENST00000562118 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
CDH1-204ENST00000562118 KCNQ3O43525 872 aa17.63■□□□□ 0.41
CDH1-204ENST00000562118 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
CDH1-204ENST00000562118 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
CDH1-204ENST00000562118 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
CDH1-204ENST00000562118 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
CDH1-204ENST00000562118 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
CDH1-204ENST00000562118 STK32BQ9NY57 414 aa17.62■□□□□ 0.41
CDH1-204ENST00000562118 PNPLA7Q6ZV29 1317 aa17.62■□□□□ 0.41
CDH1-204ENST00000562118 NEUROD2Q15784 382 aa17.61■□□□□ 0.41
CDH1-204ENST00000562118 AMIGO3Q86WK7 504 aa17.61■□□□□ 0.41
CDH1-204ENST00000562118 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
CDH1-204ENST00000562118 CFAP44Q96MT7 982 aa17.61■□□□□ 0.41
CDH1-204ENST00000562118 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
CDH1-204ENST00000562118 IL16Q14005 1332 aa17.61■□□□□ 0.41
CDH1-204ENST00000562118 CYP19A1P11511 503 aaPredicted RBP17.6■□□□□ 0.41
CDH1-204ENST00000562118 EIF4A1P60842 406 aaKnown RBP17.6■□□□□ 0.41
CDH1-204ENST00000562118 R3HDM1Q15032 1099 aaKnown RBP17.6■□□□□ 0.41
CDH1-204ENST00000562118 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
CDH1-204ENST00000562118 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
CDH1-204ENST00000562118 DNAJC10Q8IXB1 793 aa17.59■□□□□ 0.41
CDH1-204ENST00000562118 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
CDH1-204ENST00000562118 SSFA2P28290 1259 aa17.58■□□□□ 0.4
CDH1-204ENST00000562118 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
CDH1-204ENST00000562118 BCORQ6W2J9 1755 aa17.58■□□□□ 0.4
CDH1-204ENST00000562118 SCN7AQ01118 1682 aa17.58■□□□□ 0.4
CDH1-204ENST00000562118 GIGYF1O75420 1035 aaPredicted RBP17.57■□□□□ 0.4
CDH1-204ENST00000562118 CRKLP46109 303 aaKnown RBP17.57■□□□□ 0.4
CDH1-204ENST00000562118 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
CDH1-204ENST00000562118 PSDA5PKW4 1024 aaPredicted RBP17.56■□□□□ 0.4
CDH1-204ENST00000562118 RPS6KA4O75676 772 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms