RNA–Protein interactions for RNA: ENST00000561397.1

AP4E1-206, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 1,233 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-206ENST00000561397 ATP1A2P50993 1020 aa9.06□□□□□ -0.96
AP4E1-206ENST00000561397 IRF7Q92985 503 aa9.06□□□□□ -0.96
AP4E1-206ENST00000561397 DNAAF2Q9NVR5 837 aaKnown RBP9.06□□□□□ -0.96
AP4E1-206ENST00000561397 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
AP4E1-206ENST00000561397 ADH1AP07327 375 aa9.05□□□□□ -0.96
AP4E1-206ENST00000561397 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
AP4E1-206ENST00000561397 ZNF395Q9H8N7 513 aaPredicted RBP9.05□□□□□ -0.96
AP4E1-206ENST00000561397 NOVA2Q9UNW9 492 aaKnown RBP9.05□□□□□ -0.96
AP4E1-206ENST00000561397 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
AP4E1-206ENST00000561397 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
AP4E1-206ENST00000561397 FAM69CQ0P6D2 419 aa9.04□□□□□ -0.96
AP4E1-206ENST00000561397 ANKMY2Q8IV38 441 aa9.04□□□□□ -0.96
AP4E1-206ENST00000561397 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
AP4E1-206ENST00000561397 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
AP4E1-206ENST00000561397 INSM2Q96T92 566 aaPredicted RBP9.04□□□□□ -0.96
AP4E1-206ENST00000561397 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
AP4E1-206ENST00000561397 VSIG8P0DPA2 414 aa9.03□□□□□ -0.96
AP4E1-206ENST00000561397 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
AP4E1-206ENST00000561397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.03□□□□□ -0.96
AP4E1-206ENST00000561397 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
AP4E1-206ENST00000561397 PTGIRP43119 386 aa9.02□□□□□ -0.97
AP4E1-206ENST00000561397 SCNN1DP51172 638 aa9.02□□□□□ -0.97
AP4E1-206ENST00000561397 TMEM164Q5U3C3 297 aa9.02□□□□□ -0.97
AP4E1-206ENST00000561397 ZNF594Q96JF6 807 aaPredicted RBP9.02□□□□□ -0.97
AP4E1-206ENST00000561397 TRAIPQ9BWF2 469 aa9.02□□□□□ -0.97
AP4E1-206ENST00000561397 TMEM229AB2RXF0 380 aa9.01□□□□□ -0.97
AP4E1-206ENST00000561397 PTSQ03393 145 aa9.01□□□□□ -0.97
AP4E1-206ENST00000561397 DPYDQ12882 1025 aa9.01□□□□□ -0.97
AP4E1-206ENST00000561397 CCDC102BQ68D86 513 aa9.01□□□□□ -0.97
AP4E1-206ENST00000561397 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
AP4E1-206ENST00000561397 FOXD4L5Q5VV16 416 aaPredicted RBP9□□□□□ -0.97
AP4E1-206ENST00000561397 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
AP4E1-206ENST00000561397 TPCN2Q8NHX9 752 aa9□□□□□ -0.97
AP4E1-206ENST00000561397 RNF217Q8TC41 542 aa9□□□□□ -0.97
AP4E1-206ENST00000561397 STK17AQ9UEE5 414 aa9□□□□□ -0.97
AP4E1-206ENST00000561397 CARNS1A5YM72 827 aa8.99□□□□□ -0.97
AP4E1-206ENST00000561397 M0R2N6 131 aa8.99□□□□□ -0.97
AP4E1-206ENST00000561397 STAU1O95793 577 aaKnown RBP8.99□□□□□ -0.97
AP4E1-206ENST00000561397 GNRH1P01148 92 aa8.99□□□□□ -0.97
AP4E1-206ENST00000561397 FAM200AQ8TCP9 573 aa8.99□□□□□ -0.97
AP4E1-206ENST00000561397 ETNK1Q9HBU6 452 aa8.99□□□□□ -0.97
AP4E1-206ENST00000561397 SLAIN2Q9P270 581 aa8.99□□□□□ -0.97
AP4E1-206ENST00000561397 SLC35F4A4IF30 521 aa8.98□□□□□ -0.97
AP4E1-206ENST00000561397 SEC13P55735 322 aa8.98□□□□□ -0.97
AP4E1-206ENST00000561397 POLMQ9NP87 494 aaPredicted RBP8.98□□□□□ -0.97
AP4E1-206ENST00000561397 HRH3Q9Y5N1 445 aa8.98□□□□□ -0.97
AP4E1-206ENST00000561397 SENP3-EIF4A1A0A087X0R7 540 aa8.97□□□□□ -0.97
AP4E1-206ENST00000561397 SFI1A8K8P3 1242 aa8.97□□□□□ -0.97
AP4E1-206ENST00000561397 INHAP05111 366 aa8.97□□□□□ -0.97
AP4E1-206ENST00000561397 SWI5Q1ZZU3 235 aa8.97□□□□□ -0.97
AP4E1-206ENST00000561397 ZNF358Q9NW07 568 aa8.97□□□□□ -0.97
AP4E1-206ENST00000561397 GDF10P55107 478 aa8.96□□□□□ -0.98
AP4E1-206ENST00000561397 PSME1Q06323 249 aa8.96□□□□□ -0.98
AP4E1-206ENST00000561397 PDE4CQ08493 712 aa8.96□□□□□ -0.98
AP4E1-206ENST00000561397 CCDC155Q8N6L0 562 aa8.96□□□□□ -0.98
AP4E1-206ENST00000561397 GPR161Q8N6U8 529 aaKnown RBP8.96□□□□□ -0.98
AP4E1-206ENST00000561397 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
AP4E1-206ENST00000561397 CLP1Q92989 425 aaKnown RBP8.96□□□□□ -0.98
AP4E1-206ENST00000561397 XAGE2Q96GT9 111 aa8.96□□□□□ -0.98
AP4E1-206ENST00000561397 SLC4A9Q96Q91 983 aa8.96□□□□□ -0.98
AP4E1-206ENST00000561397 ESF1Q9H501 851 aaKnown RBP8.96□□□□□ -0.98
AP4E1-206ENST00000561397 IL2RAP01589 272 aa8.95□□□□□ -0.98
AP4E1-206ENST00000561397 EPHA4P54764 986 aa8.95□□□□□ -0.98
AP4E1-206ENST00000561397 ARHGEF10LQ9HCE6 1279 aa8.95□□□□□ -0.98
AP4E1-206ENST00000561397 A0A1W2PRU2 124 aa8.94□□□□□ -0.98
AP4E1-206ENST00000561397 PDIA4P13667 645 aaKnown RBP8.94□□□□□ -0.98
AP4E1-206ENST00000561397 RNF144AP50876 292 aaPredicted RBP8.94□□□□□ -0.98
AP4E1-206ENST00000561397 CLN3Q13286 438 aa8.94□□□□□ -0.98
AP4E1-206ENST00000561397 MTFR1Q15390 333 aa8.93□□□□□ -0.98
AP4E1-206ENST00000561397 ESCO1Q5FWF5 840 aa8.93□□□□□ -0.98
AP4E1-206ENST00000561397 ZSCAN1Q8NBB4 408 aa8.93□□□□□ -0.98
AP4E1-206ENST00000561397 ESYT1Q9BSJ8 1104 aa8.93□□□□□ -0.98
AP4E1-206ENST00000561397 RAB6BQ9NRW1 208 aa8.93□□□□□ -0.98
AP4E1-206ENST00000561397 KRT76Q01546 638 aa8.92□□□□□ -0.98
AP4E1-206ENST00000561397 OCLNQ16625 522 aa8.92□□□□□ -0.98
AP4E1-206ENST00000561397 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
AP4E1-206ENST00000561397 TSEN2Q8NCE0 465 aaKnown RBP8.92□□□□□ -0.98
AP4E1-206ENST00000561397 NANOS1Q8WY41 292 aaKnown RBP8.92□□□□□ -0.98
AP4E1-206ENST00000561397 FAM181BA6NEQ2 426 aa8.91□□□□□ -0.98
AP4E1-206ENST00000561397 BACH1O14867 736 aa8.91□□□□□ -0.98
AP4E1-206ENST00000561397 FOXK2Q01167 660 aa8.91□□□□□ -0.98
AP4E1-206ENST00000561397 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
AP4E1-206ENST00000561397 CNKSR1Q969H4 720 aa8.91□□□□□ -0.98
AP4E1-206ENST00000561397 FHDC1Q9C0D6 1143 aaPredicted RBP8.91□□□□□ -0.98
AP4E1-206ENST00000561397 MEN1O00255 615 aa8.9□□□□□ -0.98
AP4E1-206ENST00000561397 ITGA6P23229 1130 aa8.9□□□□□ -0.98
AP4E1-206ENST00000561397 SSFA2P28290 1259 aa8.9□□□□□ -0.98
AP4E1-206ENST00000561397 WEE1P30291 646 aa8.9□□□□□ -0.98
AP4E1-206ENST00000561397 PRICKLE2Q7Z3G6 844 aa8.9□□□□□ -0.98
AP4E1-206ENST00000561397 RBM19Q9Y4C8 960 aaKnown RBP8.9□□□□□ -0.98
AP4E1-206ENST00000561397 BRD1O95696 1058 aa8.89□□□□□ -0.99
AP4E1-206ENST00000561397 GPC1P35052 558 aa8.89□□□□□ -0.99
AP4E1-206ENST00000561397 SMTNP53814 917 aa8.89□□□□□ -0.99
AP4E1-206ENST00000561397 TNS4Q8IZW8 715 aa8.89□□□□□ -0.99
AP4E1-206ENST00000561397 ZNF295-AS1Q8N0V1 137 aa8.89□□□□□ -0.99
AP4E1-206ENST00000561397 CUEDC1Q9NWM3 386 aaPredicted RBP8.89□□□□□ -0.99
AP4E1-206ENST00000561397 SERTAD1Q9UHV2 236 aa8.89□□□□□ -0.99
AP4E1-206ENST00000561397 IQSEC3Q9UPP2 1182 aaPredicted RBP8.89□□□□□ -0.99
AP4E1-206ENST00000561397 A6NJY4 79 aa8.88□□□□□ -0.99
AP4E1-206ENST00000561397 C21orf2O43822 256 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms