RNA–Protein interactions for RNA: ENST00000561317.1

SPRED1-203, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 4

Gene SPRED1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-203ENST00000561317 CRB1P82279 1406 aa9.42□□□□□ -0.9
SPRED1-203ENST00000561317 CPDO75976 1380 aa9.42□□□□□ -0.9
SPRED1-203ENST00000561317 EXOC5O00471 708 aa9.42□□□□□ -0.9
SPRED1-203ENST00000561317 ST18O60284 1047 aa9.42□□□□□ -0.9
SPRED1-203ENST00000561317 ACSBG1Q96GR2 724 aa9.42□□□□□ -0.9
SPRED1-203ENST00000561317 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
SPRED1-203ENST00000561317 PLEKHG3A1L390 1219 aa9.41□□□□□ -0.9
SPRED1-203ENST00000561317 DDX10Q13206 875 aaKnown RBP9.41□□□□□ -0.9
SPRED1-203ENST00000561317 CRISPLD2Q9H0B8 497 aa9.41□□□□□ -0.9
SPRED1-203ENST00000561317 PARP4Q9UKK3 1724 aaKnown RBP9.41□□□□□ -0.9
SPRED1-203ENST00000561317 QRICH2Q9H0J4 1663 aa9.41□□□□□ -0.9
SPRED1-203ENST00000561317 USP19O94966 1318 aa9.4□□□□□ -0.9
SPRED1-203ENST00000561317 TMC1Q8TDI8 760 aa9.4□□□□□ -0.9
SPRED1-203ENST00000561317 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
SPRED1-203ENST00000561317 POLR3AO14802 1390 aaPredicted RBP9.39□□□□□ -0.91
SPRED1-203ENST00000561317 POLD1P28340 1107 aa9.39□□□□□ -0.91
SPRED1-203ENST00000561317 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
SPRED1-203ENST00000561317 SLC12A5Q9H2X9 1139 aa9.39□□□□□ -0.91
SPRED1-203ENST00000561317 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
SPRED1-203ENST00000561317 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
SPRED1-203ENST00000561317 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
SPRED1-203ENST00000561317 PEAK1Q9H792 1746 aa9.39□□□□□ -0.91
SPRED1-203ENST00000561317 LMO7Q8WWI1 1683 aa9.39□□□□□ -0.91
SPRED1-203ENST00000561317 RGPD3A6NKT7 1758 aaPredicted RBP9.38□□□□□ -0.91
SPRED1-203ENST00000561317 RGPD4Q7Z3J3 1758 aa9.38□□□□□ -0.91
SPRED1-203ENST00000561317 WDR17Q8IZU2 1322 aa9.37□□□□□ -0.91
SPRED1-203ENST00000561317 ZNF827Q17R98 1081 aa9.37□□□□□ -0.91
SPRED1-203ENST00000561317 NLGN2Q8NFZ4 835 aa9.37□□□□□ -0.91
SPRED1-203ENST00000561317 ZNF526Q8TF50 670 aaPredicted RBP9.37□□□□□ -0.91
SPRED1-203ENST00000561317 PANK3Q9H999 370 aa9.37□□□□□ -0.91
SPRED1-203ENST00000561317 LRRC37A3O60309 1634 aa9.37□□□□□ -0.91
SPRED1-203ENST00000561317 AATKQ6ZMQ8 1374 aa9.37□□□□□ -0.91
SPRED1-203ENST00000561317 MFSD10Q14728 455 aa9.36□□□□□ -0.91
SPRED1-203ENST00000561317 CARD10Q9BWT7 1032 aa9.36□□□□□ -0.91
SPRED1-203ENST00000561317 TERF2IPQ9NYB0 399 aa9.36□□□□□ -0.91
SPRED1-203ENST00000561317 PPIP5K1Q6PFW1 1433 aa9.36□□□□□ -0.91
SPRED1-203ENST00000561317 AKAP12Q02952 1782 aa9.35□□□□□ -0.91
SPRED1-203ENST00000561317 CEP350Q5VT06 3117 aa9.35□□□□□ -0.91
SPRED1-203ENST00000561317 GRIN3BO60391 1043 aa9.35□□□□□ -0.91
SPRED1-203ENST00000561317 PDE4AP27815 886 aa9.35□□□□□ -0.91
SPRED1-203ENST00000561317 DIEXFQ68CQ4 756 aaKnown RBP9.35□□□□□ -0.91
SPRED1-203ENST00000561317 HDGFL2Q7Z4V5 671 aaPredicted RBP9.35□□□□□ -0.91
SPRED1-203ENST00000561317 GPBP1L1Q9HC44 474 aaPredicted RBP9.35□□□□□ -0.91
SPRED1-203ENST00000561317 TFCP2L1Q9NZI6 479 aa9.35□□□□□ -0.91
SPRED1-203ENST00000561317 YBX3P16989 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
SPRED1-203ENST00000561317 KCNQ4P56696 695 aa9.34□□□□□ -0.91
SPRED1-203ENST00000561317 MARVELD3Q96A59 401 aa9.34□□□□□ -0.91
SPRED1-203ENST00000561317 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
SPRED1-203ENST00000561317 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
SPRED1-203ENST00000561317 ANKRD36BQ8N2N9 1353 aa9.34□□□□□ -0.91
SPRED1-203ENST00000561317 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
SPRED1-203ENST00000561317 KIF3CO14782 793 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 PER1O15534 1290 aaPredicted RBP9.33□□□□□ -0.92
SPRED1-203ENST00000561317 HSPA6P17066 643 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 TMEM92Q6UXU6 159 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 CDAN1Q8IWY9 1227 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 NLRP2Q9NX02 1062 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 KNSTRNQ9Y448 316 aa9.33□□□□□ -0.92
SPRED1-203ENST00000561317 BCL9O00512 1426 aa9.32□□□□□ -0.92
SPRED1-203ENST00000561317 ARHGEF25Q86VW2 580 aa9.32□□□□□ -0.92
SPRED1-203ENST00000561317 LARP6Q9BRS8 491 aaKnown RBP9.32□□□□□ -0.92
SPRED1-203ENST00000561317 A0A1W2PP64 1363 aa9.32□□□□□ -0.92
SPRED1-203ENST00000561317 CD163L1Q9NR16 1453 aa9.32□□□□□ -0.92
SPRED1-203ENST00000561317 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
SPRED1-203ENST00000561317 USP6P35125 1406 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
SPRED1-203ENST00000561317 ATP10DQ9P241 1426 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 EMP3P54852 163 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 KCNH5Q8NCM2 988 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
SPRED1-203ENST00000561317 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
SPRED1-203ENST00000561317 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
SPRED1-203ENST00000561317 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 BRD4O60885 1362 aaPredicted RBP9.31□□□□□ -0.92
SPRED1-203ENST00000561317 KTN1Q86UP2 1357 aaKnown RBP9.31□□□□□ -0.92
SPRED1-203ENST00000561317 PNPLA7Q6ZV29 1317 aa9.31□□□□□ -0.92
SPRED1-203ENST00000561317 TOPAZ1Q8N9V7 1692 aa9.3□□□□□ -0.92
SPRED1-203ENST00000561317 C2orf72A6NCS6 295 aa9.3□□□□□ -0.92
SPRED1-203ENST00000561317 MSL1Q68DK7 614 aa9.3□□□□□ -0.92
SPRED1-203ENST00000561317 TMC2Q8TDI7 906 aa9.3□□□□□ -0.92
SPRED1-203ENST00000561317 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
SPRED1-203ENST00000561317 NSD3Q9BZ95 1437 aa9.3□□□□□ -0.92
SPRED1-203ENST00000561317 COL18A1P39060 1754 aa9.29□□□□□ -0.92
SPRED1-203ENST00000561317 WNK3Q9BYP7 1800 aa9.29□□□□□ -0.92
SPRED1-203ENST00000561317 ANP32CO43423 234 aa9.29□□□□□ -0.92
SPRED1-203ENST00000561317 IL2RBP14784 551 aa9.29□□□□□ -0.92
SPRED1-203ENST00000561317 CGNL1Q0VF96 1302 aa9.29□□□□□ -0.92
SPRED1-203ENST00000561317 TTC21BQ7Z4L5 1316 aa9.29□□□□□ -0.92
SPRED1-203ENST00000561317 FOXK1P85037 733 aa9.28□□□□□ -0.92
SPRED1-203ENST00000561317 CNGB1Q14028 1251 aaPredicted RBP9.28□□□□□ -0.92
SPRED1-203ENST00000561317 SLC27A3Q5K4L6 730 aa9.28□□□□□ -0.92
SPRED1-203ENST00000561317 PPP1R15BQ5SWA1 713 aa9.28□□□□□ -0.92
SPRED1-203ENST00000561317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.28□□□□□ -0.923e-6■■■□□ 16.1
SPRED1-203ENST00000561317 EDC4Q6P2E9 1401 aaKnown RBP9.28□□□□□ -0.92
SPRED1-203ENST00000561317 SLIT3O75094 1523 aa9.27□□□□□ -0.93
SPRED1-203ENST00000561317 BTAF1O14981 1849 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms