RNA–Protein interactions for RNA: ENST00000561298.1

PKNOX2-213, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-213ENST00000561298 APBA3O96018 575 aa12.59□□□□□ -0.39
PKNOX2-213ENST00000561298 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
PKNOX2-213ENST00000561298 NFE2L2Q16236 605 aa12.59□□□□□ -0.39
PKNOX2-213ENST00000561298 RUNDC1Q96C34 613 aa12.59□□□□□ -0.39
PKNOX2-213ENST00000561298 CAMKK2Q96RR4 588 aa12.59□□□□□ -0.39
PKNOX2-213ENST00000561298 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
PKNOX2-213ENST00000561298 PROM2Q8N271 834 aa12.58□□□□□ -0.4
PKNOX2-213ENST00000561298 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
PKNOX2-213ENST00000561298 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 PLSCR1O15162 318 aa12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 PNNQ9H307 717 aaKnown RBP12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
PKNOX2-213ENST00000561298 BAG6P46379 1132 aa12.56□□□□□ -0.4
PKNOX2-213ENST00000561298 MCM10Q7L590 875 aa12.56□□□□□ -0.4
PKNOX2-213ENST00000561298 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
PKNOX2-213ENST00000561298 TMOD3Q9NYL9 352 aa12.56□□□□□ -0.4
PKNOX2-213ENST00000561298 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
PKNOX2-213ENST00000561298 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
PKNOX2-213ENST00000561298 RRP7AQ9Y3A4 280 aaKnown RBP12.56□□□□□ -0.4
PKNOX2-213ENST00000561298 APAF1O14727 1248 aa12.55□□□□□ -0.4
PKNOX2-213ENST00000561298 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
PKNOX2-213ENST00000561298 CABP4P57796 275 aa12.55□□□□□ -0.4
PKNOX2-213ENST00000561298 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
PKNOX2-213ENST00000561298 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
PKNOX2-213ENST00000561298 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
PKNOX2-213ENST00000561298 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
PKNOX2-213ENST00000561298 RIPK4P57078 832 aa12.54□□□□□ -0.4
PKNOX2-213ENST00000561298 LRRC4BQ9NT99 713 aa12.54□□□□□ -0.4
PKNOX2-213ENST00000561298 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
PKNOX2-213ENST00000561298 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
PKNOX2-213ENST00000561298 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
PKNOX2-213ENST00000561298 NEFMP07197 916 aa12.53□□□□□ -0.4
PKNOX2-213ENST00000561298 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
PKNOX2-213ENST00000561298 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
PKNOX2-213ENST00000561298 KCNQ4P56696 695 aa12.52□□□□□ -0.41
PKNOX2-213ENST00000561298 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
PKNOX2-213ENST00000561298 NEUROD2Q15784 382 aa12.52□□□□□ -0.41
PKNOX2-213ENST00000561298 CASZ1Q86V15 1759 aa12.51□□□□□ -0.41
PKNOX2-213ENST00000561298 KCNQ3O43525 872 aa12.51□□□□□ -0.41
PKNOX2-213ENST00000561298 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
PKNOX2-213ENST00000561298 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
PKNOX2-213ENST00000561298 TEFQ10587 303 aa12.5□□□□□ -0.41
PKNOX2-213ENST00000561298 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
PKNOX2-213ENST00000561298 C4AP0C0L4 1744 aa12.49□□□□□ -0.41
PKNOX2-213ENST00000561298 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
PKNOX2-213ENST00000561298 SIK1P57059 783 aa12.49□□□□□ -0.41
PKNOX2-213ENST00000561298 ITPK1Q13572 414 aa12.49□□□□□ -0.41
PKNOX2-213ENST00000561298 SLC27A3Q5K4L6 730 aa12.49□□□□□ -0.41
PKNOX2-213ENST00000561298 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
PKNOX2-213ENST00000561298 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
PKNOX2-213ENST00000561298 ZNF790Q6PG37 636 aa12.48□□□□□ -0.41
PKNOX2-213ENST00000561298 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
PKNOX2-213ENST00000561298 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
PKNOX2-213ENST00000561298 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
PKNOX2-213ENST00000561298 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
PKNOX2-213ENST00000561298 PTCD1O75127 700 aaKnown RBP12.47□□□□□ -0.41
PKNOX2-213ENST00000561298 ZNF827Q17R98 1081 aa12.47□□□□□ -0.41
PKNOX2-213ENST00000561298 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
PKNOX2-213ENST00000561298 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
PKNOX2-213ENST00000561298 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
PKNOX2-213ENST00000561298 ZNF496Q96IT1 587 aaPredicted RBP12.47□□□□□ -0.41
PKNOX2-213ENST00000561298 HEG1Q9ULI3 1381 aa12.46□□□□□ -0.41
PKNOX2-213ENST00000561298 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
PKNOX2-213ENST00000561298 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
PKNOX2-213ENST00000561298 WWC1Q8IX03 1113 aa12.46□□□□□ -0.41
PKNOX2-213ENST00000561298 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
PKNOX2-213ENST00000561298 SUPT16HQ9Y5B9 1047 aaKnown RBP12.46□□□□□ -0.41
PKNOX2-213ENST00000561298 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
PKNOX2-213ENST00000561298 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
PKNOX2-213ENST00000561298 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
PKNOX2-213ENST00000561298 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
PKNOX2-213ENST00000561298 CHL1O00533 1208 aa12.44□□□□□ -0.42
PKNOX2-213ENST00000561298 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
PKNOX2-213ENST00000561298 DNAJC10Q8IXB1 793 aa12.44□□□□□ -0.42
PKNOX2-213ENST00000561298 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
PKNOX2-213ENST00000561298 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
PKNOX2-213ENST00000561298 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
PKNOX2-213ENST00000561298 BABAM1Q9NWV8 329 aa12.43□□□□□ -0.42
PKNOX2-213ENST00000561298 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
PKNOX2-213ENST00000561298 CYP19A1P11511 503 aaPredicted RBP12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 SLC15A2Q16348 729 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 SMIM5Q71RC9 77 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 TSPYL4Q9UJ04 414 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 BCORQ6W2J9 1755 aa12.42□□□□□ -0.42
PKNOX2-213ENST00000561298 CNTNAP4Q9C0A0 1308 aa12.41□□□□□ -0.42
PKNOX2-213ENST00000561298 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
PKNOX2-213ENST00000561298 FKBP8Q14318 412 aa12.41□□□□□ -0.42
PKNOX2-213ENST00000561298 R3HDM1Q15032 1099 aaKnown RBP12.41□□□□□ -0.42
PKNOX2-213ENST00000561298 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
PKNOX2-213ENST00000561298 INTS5Q6P9B9 1019 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms