RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 RGS12O14924 1447 aa17.18■□□□□ 0.34
RABGGTA-220ENST00000560998 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
RABGGTA-220ENST00000560998 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
RABGGTA-220ENST00000560998 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
RABGGTA-220ENST00000560998 ZNF445P59923 1031 aa17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 INTS3Q68E01 1043 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 FAM13BQ9NYF5 915 aa17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 LTN1O94822 1766 aa17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 HSP90AB1P08238 724 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-220ENST00000560998 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
RABGGTA-220ENST00000560998 UQCRHLA0A096LP55 91 aa17.16■□□□□ 0.34
RABGGTA-220ENST00000560998 HTATSF1O43719 755 aaKnown RBP17.16■□□□□ 0.34
RABGGTA-220ENST00000560998 UQCRHP07919 91 aa17.16■□□□□ 0.34
RABGGTA-220ENST00000560998 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
RABGGTA-220ENST00000560998 R3HCC1Q9Y3T6 440 aaKnown RBP17.16■□□□□ 0.34
RABGGTA-220ENST00000560998 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
RABGGTA-220ENST00000560998 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
RABGGTA-220ENST00000560998 PTPRCP08575 1304 aa17.15■□□□□ 0.34
RABGGTA-220ENST00000560998 NFAT5O94916 1531 aa17.15■□□□□ 0.34
RABGGTA-220ENST00000560998 C14orf37Q86TY3 774 aa17.14■□□□□ 0.33
RABGGTA-220ENST00000560998 PDLIM2Q96JY6 352 aa17.14■□□□□ 0.33
RABGGTA-220ENST00000560998 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
RABGGTA-220ENST00000560998 SASS6Q6UVJ0 657 aa17.13■□□□□ 0.33
RABGGTA-220ENST00000560998 GNAT3A8MTJ3 354 aa17.12■□□□□ 0.33
RABGGTA-220ENST00000560998 DMTNQ08495 405 aa17.12■□□□□ 0.33
RABGGTA-220ENST00000560998 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-220ENST00000560998 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 FGD1P98174 961 aa17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 PSME1Q06323 249 aa17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 IP6K1Q92551 441 aa17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 ZKSCAN5Q9Y2L8 839 aa17.11■□□□□ 0.33
RABGGTA-220ENST00000560998 MSH6P52701 1360 aa17.1■□□□□ 0.33
RABGGTA-220ENST00000560998 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-220ENST00000560998 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
RABGGTA-220ENST00000560998 BMP2KLQ5H9B9 411 aa17.09■□□□□ 0.33
RABGGTA-220ENST00000560998 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-220ENST00000560998 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.33
RABGGTA-220ENST00000560998 ANKRD44Q8N8A2 993 aa17.08■□□□□ 0.33
RABGGTA-220ENST00000560998 IL17REQ8NFR9 667 aa17.08■□□□□ 0.33
RABGGTA-220ENST00000560998 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-220ENST00000560998 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
RABGGTA-220ENST00000560998 DCTPP1Q9H773 170 aa17.08■□□□□ 0.32
RABGGTA-220ENST00000560998 A0A0U1RQG5 324 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-220ENST00000560998 G2E3Q7L622 706 aa17.07■□□□□ 0.32
RABGGTA-220ENST00000560998 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
RABGGTA-220ENST00000560998 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
RABGGTA-220ENST00000560998 CCDC39Q9UFE4 941 aa17.07■□□□□ 0.32
RABGGTA-220ENST00000560998 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-220ENST00000560998 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
RABGGTA-220ENST00000560998 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-220ENST00000560998 GTPBP4Q9BZE4 634 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-220ENST00000560998 CACNA1FO60840 1977 aa17.05■□□□□ 0.32
RABGGTA-220ENST00000560998 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-220ENST00000560998 BAG4O95429 457 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-220ENST00000560998 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-220ENST00000560998 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
RABGGTA-220ENST00000560998 MEIS3Q99687 375 aa17.05■□□□□ 0.32
RABGGTA-220ENST00000560998 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
RABGGTA-220ENST00000560998 SLIT3O75094 1523 aa17.04■□□□□ 0.32
RABGGTA-220ENST00000560998 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
RABGGTA-220ENST00000560998 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
RABGGTA-220ENST00000560998 KIF20AO95235 890 aa17.04■□□□□ 0.32
RABGGTA-220ENST00000560998 CCT4P50991 539 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-220ENST00000560998 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
RABGGTA-220ENST00000560998 TRPM3Q9HCF6 1732 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-220ENST00000560998 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-220ENST00000560998 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
RABGGTA-220ENST00000560998 NUCB2P80303 420 aa17.02■□□□□ 0.32
RABGGTA-220ENST00000560998 ZSCAN23Q3MJ62 389 aa17.02■□□□□ 0.32
RABGGTA-220ENST00000560998 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.32
RABGGTA-220ENST00000560998 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.31
RABGGTA-220ENST00000560998 F6X3S4 739 aa17.02■□□□□ 0.31
RABGGTA-220ENST00000560998 SSFA2P28290 1259 aa17.02■□□□□ 0.31
RABGGTA-220ENST00000560998 ZSCAN20P17040 1043 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-220ENST00000560998 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
RABGGTA-220ENST00000560998 KIF2CQ99661 725 aa17.01■□□□□ 0.31
RABGGTA-220ENST00000560998 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
RABGGTA-220ENST00000560998 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
RABGGTA-220ENST00000560998 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
RABGGTA-220ENST00000560998 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
RABGGTA-220ENST00000560998 FLIIQ13045 1269 aa17■□□□□ 0.31
RABGGTA-220ENST00000560998 PROSER2Q86WR7 435 aaPredicted RBP17■□□□□ 0.31
RABGGTA-220ENST00000560998 PLEKHM2Q8IWE5 1019 aa17■□□□□ 0.31
RABGGTA-220ENST00000560998 LETM1O95202 739 aaPredicted RBP17■□□□□ 0.31
RABGGTA-220ENST00000560998 GCP02774 474 aa17■□□□□ 0.31
RABGGTA-220ENST00000560998 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
RABGGTA-220ENST00000560998 MYRIPQ8NFW9 859 aa17■□□□□ 0.31
RABGGTA-220ENST00000560998 PRIMPOLQ96LW4 560 aa17■□□□□ 0.31
RABGGTA-220ENST00000560998 NCAPD2Q15021 1401 aa16.99■□□□□ 0.31
RABGGTA-220ENST00000560998 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
RABGGTA-220ENST00000560998 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
RABGGTA-220ENST00000560998 HMGN5P82970 282 aaKnown RBP16.98■□□□□ 0.31
RABGGTA-220ENST00000560998 TBC1D9Q6ZT07 1266 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms