RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
IDH3A-220ENST00000560667 EIF2S2P20042 333 aaKnown RBP9.58□□□□□ -0.88
IDH3A-220ENST00000560667 EIF4A1P60842 406 aaKnown RBP9.58□□□□□ -0.88
IDH3A-220ENST00000560667 PPP4R2Q9NY27 417 aa9.58□□□□□ -0.88
IDH3A-220ENST00000560667 CCDC9Q9Y3X0 531 aaKnown RBP9.58□□□□□ -0.88
IDH3A-220ENST00000560667 COL22A1Q8NFW1 1626 aaPredicted RBP9.58□□□□□ -0.88
IDH3A-220ENST00000560667 SLC4A2P04920 1241 aa9.57□□□□□ -0.88
IDH3A-220ENST00000560667 FAM182BQ5T319 152 aa9.57□□□□□ -0.88
IDH3A-220ENST00000560667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.57□□□□□ -0.88
IDH3A-220ENST00000560667 CANXP27824 592 aaKnown RBP9.56□□□□□ -0.88
IDH3A-220ENST00000560667 PIP4K2AP48426 406 aaPredicted RBP9.56□□□□□ -0.88
IDH3A-220ENST00000560667 RBM6P78332 1123 aaKnown RBP9.56□□□□□ -0.88
IDH3A-220ENST00000560667 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
IDH3A-220ENST00000560667 OVOS2A0A0G2JMS6 1433 aa9.56□□□□□ -0.88
IDH3A-220ENST00000560667 SPATA31A1Q5TZJ5 1347 aa9.56□□□□□ -0.88
IDH3A-220ENST00000560667 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
IDH3A-220ENST00000560667 FAM98CQ17RN3 349 aaKnown RBP9.55□□□□□ -0.88
IDH3A-220ENST00000560667 TMEM57Q8N5G2 664 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 ZNF428Q96B54 188 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 PHAXQ9H814 394 aaKnown RBP9.55□□□□□ -0.88
IDH3A-220ENST00000560667 F6X3S4 739 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 PROSER3Q2NL68 480 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 ALDH1L2Q3SY69 923 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 ZKSCAN2Q63HK3 967 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 ATF7IPQ6VMQ6 1270 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 PTF1AQ7RTS3 328 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 ZNF496Q96IT1 587 aaPredicted RBP9.55□□□□□ -0.88
IDH3A-220ENST00000560667 DCAF5Q96JK2 942 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 USP16Q9Y5T5 823 aa9.55□□□□□ -0.88
IDH3A-220ENST00000560667 SPATA31A5Q5VU36 1347 aa9.54□□□□□ -0.88
IDH3A-220ENST00000560667 SPATA31A7Q8IWB4 1347 aa9.54□□□□□ -0.88
IDH3A-220ENST00000560667 KAT6BQ8WYB5 2073 aa9.54□□□□□ -0.88
IDH3A-220ENST00000560667 EXOC5O00471 708 aa9.54□□□□□ -0.88
IDH3A-220ENST00000560667 CT47B1P0C2W7 299 aaPredicted RBP9.54□□□□□ -0.88
IDH3A-220ENST00000560667 CABP4P57796 275 aa9.54□□□□□ -0.88
IDH3A-220ENST00000560667 ZNF790Q6PG37 636 aa9.54□□□□□ -0.88
IDH3A-220ENST00000560667 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
IDH3A-220ENST00000560667 MARCH10Q8NA82 808 aaPredicted RBP9.54□□□□□ -0.88
IDH3A-220ENST00000560667 COL14A1Q05707 1796 aaKnown RBP9.54□□□□□ -0.88
IDH3A-220ENST00000560667 SLIT2O94813 1529 aa9.54□□□□□ -0.88
IDH3A-220ENST00000560667 RGS12O14924 1447 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 GIGYF1O75420 1035 aaPredicted RBP9.53□□□□□ -0.88
IDH3A-220ENST00000560667 IGHDP01880 384 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 PDE3AQ14432 1141 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 DZIP1LQ8IYY4 767 aaKnown RBP9.53□□□□□ -0.88
IDH3A-220ENST00000560667 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 USP21Q9UK80 565 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
IDH3A-220ENST00000560667 NKX1-1Q15270 411 aaPredicted RBP9.53□□□□□ -0.88
IDH3A-220ENST00000560667 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.53□□□□□ -0.88
IDH3A-220ENST00000560667 PIGBQ92521 554 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 ACSBG1Q96GR2 724 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 ASAP1Q9ULH1 1129 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 ABCC6O95255 1503 aa9.53□□□□□ -0.88
IDH3A-220ENST00000560667 VIRMAQ69YN4 1812 aaKnown RBP9.52□□□□□ -0.88
IDH3A-220ENST00000560667 LRRC37A3O60309 1634 aa9.52□□□□□ -0.88
IDH3A-220ENST00000560667 KCNQ2O43526 872 aa9.52□□□□□ -0.89
IDH3A-220ENST00000560667 CHPF2Q9P2E5 772 aa9.52□□□□□ -0.89
IDH3A-220ENST00000560667 PCDH11XQ9BZA7 1347 aa9.52□□□□□ -0.89
IDH3A-220ENST00000560667 PCDH11YQ9BZA8 1340 aa9.52□□□□□ -0.89
IDH3A-220ENST00000560667 DISP2A7MBM2 1401 aa9.52□□□□□ -0.89
IDH3A-220ENST00000560667 PLCH1Q4KWH8 1693 aa9.52□□□□□ -0.89
IDH3A-220ENST00000560667 PRIM1P49642 420 aaKnown RBP9.52□□□□□ -0.89
IDH3A-220ENST00000560667 HDGFL1Q5TGJ6 251 aa9.52□□□□□ -0.89
IDH3A-220ENST00000560667 SYTL4Q96C24 671 aaPredicted RBP9.52□□□□□ -0.89
IDH3A-220ENST00000560667 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
IDH3A-220ENST00000560667 PDIA6Q15084 440 aa9.51□□□□□ -0.89
IDH3A-220ENST00000560667 DDB1Q16531 1140 aa9.51□□□□□ -0.89
IDH3A-220ENST00000560667 ERICH6BQ5W0A0 696 aa9.51□□□□□ -0.89
IDH3A-220ENST00000560667 ITPRIPQ8IWB1 547 aa9.51□□□□□ -0.89
IDH3A-220ENST00000560667 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
IDH3A-220ENST00000560667 TRPC5Q9UL62 973 aaPredicted RBP9.51□□□□□ -0.89
IDH3A-220ENST00000560667 HEG1Q9ULI3 1381 aa9.51□□□□□ -0.89
IDH3A-220ENST00000560667 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
IDH3A-220ENST00000560667 A0A0G2JS52 829 aa9.5□□□□□ -0.89
IDH3A-220ENST00000560667 MVPQ14764 893 aaKnown RBP9.5□□□□□ -0.89
IDH3A-220ENST00000560667 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
IDH3A-220ENST00000560667 BABAM1Q9NWV8 329 aa9.5□□□□□ -0.89
IDH3A-220ENST00000560667 PKD1L3Q7Z443 1732 aa9.5□□□□□ -0.89
IDH3A-220ENST00000560667 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
IDH3A-220ENST00000560667 VPS72Q15906 364 aa9.5□□□□□ -0.89
IDH3A-220ENST00000560667 SLC4A9Q96Q91 983 aa9.5□□□□□ -0.89
IDH3A-220ENST00000560667 SCN11AQ9UI33 1791 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 MYL6BP14649 208 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 KCNQ4P56696 695 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 CCDC30Q5VVM6 783 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 SLC4A10Q6U841 1118 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 ADAMTS7Q9UKP4 1686 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 NRAPQ86VF7 1730 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 IPO8O15397 1037 aaKnown RBP9.49□□□□□ -0.89
IDH3A-220ENST00000560667 AIMP1Q12904 312 aaKnown RBP9.49□□□□□ -0.89
IDH3A-220ENST00000560667 FLIIQ13045 1269 aa9.49□□□□□ -0.89
IDH3A-220ENST00000560667 SIPA1L3O60292 1781 aaPredicted RBP9.48□□□□□ -0.89
IDH3A-220ENST00000560667 A1BGP04217 495 aa9.48□□□□□ -0.89
IDH3A-220ENST00000560667 HSP90AB1P08238 724 aaKnown RBP9.48□□□□□ -0.89
IDH3A-220ENST00000560667 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms