RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 LNPKQ9C0E8 428 aa23.93■■□□□ 1.42
HMBOX1-215ENST00000560599 CPDO75976 1380 aa23.92■■□□□ 1.42
HMBOX1-215ENST00000560599 SPATA31A3Q5VYP0 1347 aa23.92■■□□□ 1.42
HMBOX1-215ENST00000560599 G2E3Q7L622 706 aa23.92■■□□□ 1.42
HMBOX1-215ENST00000560599 DAXXQ9UER7 740 aaPredicted RBP23.92■■□□□ 1.42
HMBOX1-215ENST00000560599 SIPA1L3O60292 1781 aaPredicted RBP23.91■■□□□ 1.42
HMBOX1-215ENST00000560599 RNMTO43148 476 aaKnown RBP23.91■■□□□ 1.42
HMBOX1-215ENST00000560599 PLEKHG5O94827 1062 aa23.91■■□□□ 1.42
HMBOX1-215ENST00000560599 ANKRD45Q5TZF3 282 aa23.91■■□□□ 1.42
HMBOX1-215ENST00000560599 HDGFL1Q5TGJ6 251 aa23.9■■□□□ 1.42
HMBOX1-215ENST00000560599 AXIN2Q9Y2T1 843 aa23.9■■□□□ 1.42
HMBOX1-215ENST00000560599 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.41
HMBOX1-215ENST00000560599 CEP85Q6P2H3 762 aa23.89■■□□□ 1.41
HMBOX1-215ENST00000560599 HMMRO75330 724 aa23.88■■□□□ 1.41
HMBOX1-215ENST00000560599 EIF4A1P60842 406 aaKnown RBP23.88■■□□□ 1.41
HMBOX1-215ENST00000560599 FKBP5Q13451 457 aaPredicted RBP23.88■■□□□ 1.41
HMBOX1-215ENST00000560599 MEIS3Q99687 375 aa23.88■■□□□ 1.41
HMBOX1-215ENST00000560599 DCTPP1Q9H773 170 aa23.88■■□□□ 1.41
HMBOX1-215ENST00000560599 LGR6Q9HBX8 967 aa23.88■■□□□ 1.41
HMBOX1-215ENST00000560599 BMP2KLQ5H9B9 411 aa23.87■■□□□ 1.41
HMBOX1-215ENST00000560599 RAPGEF4Q8WZA2 1011 aa23.87■■□□□ 1.41
HMBOX1-215ENST00000560599 KDM4FA0A1W2PPD8 638 aa23.86■■□□□ 1.41
HMBOX1-215ENST00000560599 GNAI3P08754 354 aa23.86■■□□□ 1.41
HMBOX1-215ENST00000560599 SLC4A10Q6U841 1118 aa23.86■■□□□ 1.41
HMBOX1-215ENST00000560599 PKD1L3Q7Z443 1732 aa23.86■■□□□ 1.41
HMBOX1-215ENST00000560599 BTBD11A6QL63 1104 aa23.85■■□□□ 1.41
HMBOX1-215ENST00000560599 SEC24BO95487 1268 aa23.85■■□□□ 1.41
HMBOX1-215ENST00000560599 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
HMBOX1-215ENST00000560599 DDX17Q92841 729 aaKnown RBP23.85■■□□□ 1.41
HMBOX1-215ENST00000560599 TBC1D32Q96NH3 1257 aa23.85■■□□□ 1.41
HMBOX1-215ENST00000560599 F6X3S4 739 aa23.84■■□□□ 1.41
HMBOX1-215ENST00000560599 BRINP3Q76B58 766 aa23.84■■□□□ 1.41
HMBOX1-215ENST00000560599 GNAI2P04899 355 aa23.84■■□□□ 1.41
HMBOX1-215ENST00000560599 MPRIPQ6WCQ1 1025 aa23.84■■□□□ 1.41
HMBOX1-215ENST00000560599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.84■■□□□ 1.414e-7■■□□□ 12.6
HMBOX1-215ENST00000560599 NLRP2Q9NX02 1062 aa23.83■■□□□ 1.4
HMBOX1-215ENST00000560599 SPG7Q9UQ90 795 aa23.83■■□□□ 1.4
HMBOX1-215ENST00000560599 SCN11AQ9UI33 1791 aa23.82■■□□□ 1.4
HMBOX1-215ENST00000560599 MEGF6O75095 1541 aa23.82■■□□□ 1.4
HMBOX1-215ENST00000560599 BECN1Q14457 450 aa23.82■■□□□ 1.4
HMBOX1-215ENST00000560599 NECTIN2Q92692 538 aa23.82■■□□□ 1.4
HMBOX1-215ENST00000560599 ABCA3Q99758 1704 aa23.81■■□□□ 1.4
HMBOX1-215ENST00000560599 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
HMBOX1-215ENST00000560599 MRC1P22897 1456 aa23.81■■□□□ 1.4
HMBOX1-215ENST00000560599 EIF5BO60841 1220 aaKnown RBP23.81■■□□□ 1.4
HMBOX1-215ENST00000560599 CSB-PGBD3P0DP91 1061 aa23.81■■□□□ 1.4
HMBOX1-215ENST00000560599 NHSL1Q5SYE7 1610 aa23.79■■□□□ 1.4
HMBOX1-215ENST00000560599 SOS2Q07890 1332 aaPredicted RBP23.79■■□□□ 1.4
HMBOX1-215ENST00000560599 HEG1Q9ULI3 1381 aa23.79■■□□□ 1.4
HMBOX1-215ENST00000560599 ZNF335Q9H4Z2 1342 aaPredicted RBP23.78■■□□□ 1.4
HMBOX1-215ENST00000560599 KDM6AO15550 1401 aaPredicted RBP23.77■■□□□ 1.4
HMBOX1-215ENST00000560599 EIF2S2P20042 333 aaKnown RBP23.76■■□□□ 1.39
HMBOX1-215ENST00000560599 MFAP1P55081 439 aaKnown RBP23.76■■□□□ 1.39
HMBOX1-215ENST00000560599 CABLES1Q8TDN4 633 aa23.76■■□□□ 1.39
HMBOX1-215ENST00000560599 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
HMBOX1-215ENST00000560599 KCNQ3O43525 872 aa23.75■■□□□ 1.39
HMBOX1-215ENST00000560599 PHKG2P15735 406 aa23.75■■□□□ 1.39
HMBOX1-215ENST00000560599 C22orf23Q9BZE7 217 aa23.75■■□□□ 1.39
HMBOX1-215ENST00000560599 SLAIN2Q9P270 581 aa23.75■■□□□ 1.39
HMBOX1-215ENST00000560599 HSP90AB1P08238 724 aaKnown RBP23.74■■□□□ 1.39
HMBOX1-215ENST00000560599 CHRNA2Q15822 529 aa23.74■■□□□ 1.39
HMBOX1-215ENST00000560599 IFNL2Q8IZJ0 200 aa23.74■■□□□ 1.39
HMBOX1-215ENST00000560599 SRCIN1Q9C0H9 1055 aa23.74■■□□□ 1.39
HMBOX1-215ENST00000560599 DBF4Q9UBU7 674 aaPredicted RBP23.74■■□□□ 1.39
HMBOX1-215ENST00000560599 CDC45O75419 566 aa23.72■■□□□ 1.39
HMBOX1-215ENST00000560599 GIGYF1O75420 1035 aaPredicted RBP23.72■■□□□ 1.39
HMBOX1-215ENST00000560599 PLEKHM2Q8IWE5 1019 aa23.72■■□□□ 1.39
HMBOX1-215ENST00000560599 PHAXQ9H814 394 aaKnown RBP23.72■■□□□ 1.39
HMBOX1-215ENST00000560599 SLC52A2Q9HAB3 445 aa23.72■■□□□ 1.39
HMBOX1-215ENST00000560599 UBTFL1P0CB47 393 aaPredicted RBP23.71■■□□□ 1.39
HMBOX1-215ENST00000560599 TTC22Q5TAA0 569 aa23.71■■□□□ 1.39
HMBOX1-215ENST00000560599 DNAAF4Q8WXU2 420 aa23.71■■□□□ 1.39
HMBOX1-215ENST00000560599 ATP8B2P98198 1209 aa23.7■■□□□ 1.38
HMBOX1-215ENST00000560599 PRDM11Q9NQV5 511 aa23.7■■□□□ 1.38
HMBOX1-215ENST00000560599 C5P01031 1676 aa23.69■■□□□ 1.38
HMBOX1-215ENST00000560599 WDR17Q8IZU2 1322 aa23.69■■□□□ 1.38
HMBOX1-215ENST00000560599 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
HMBOX1-215ENST00000560599 DCAF5Q96JK2 942 aa23.69■■□□□ 1.38
HMBOX1-215ENST00000560599 COL5A2P05997 1499 aaPredicted RBP23.69■■□□□ 1.38
HMBOX1-215ENST00000560599 ADCY9O60503 1353 aa23.69■■□□□ 1.38
HMBOX1-215ENST00000560599 HYPKQ9NX55 129 aa23.68■■□□□ 1.38
HMBOX1-215ENST00000560599 LRRFIP2Q9Y608 721 aaKnown RBP23.67■■□□□ 1.38
HMBOX1-215ENST00000560599 SLC4A3P48751 1232 aa23.67■■□□□ 1.38
HMBOX1-215ENST00000560599 USP44Q9H0E7 712 aa23.67■■□□□ 1.38
HMBOX1-215ENST00000560599 LAMB4A4D0S4 1761 aa23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 GSPT1P15170 499 aaKnown RBP23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 RBM25P49756 843 aaKnown RBP23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 NBR1Q14596 966 aa23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 BEND3Q5T5X7 828 aa23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 TBC1D9Q6ZT07 1266 aa23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 HDAC5Q9UQL6 1122 aa23.66■■□□□ 1.38
HMBOX1-215ENST00000560599 IBTKQ9P2D0 1353 aaPredicted RBP23.65■■□□□ 1.38
HMBOX1-215ENST00000560599 ALDH1L1O75891 902 aa23.65■■□□□ 1.38
HMBOX1-215ENST00000560599 DDX58O95786 925 aaKnown RBP23.65■■□□□ 1.38
HMBOX1-215ENST00000560599 USP35Q9P2H5 1018 aa23.65■■□□□ 1.38
HMBOX1-215ENST00000560599 PI4KAP2A4QPH2 592 aa23.64■■□□□ 1.37
HMBOX1-215ENST00000560599 PI4KAP1Q8N8J0 262 aa23.64■■□□□ 1.37
HMBOX1-215ENST00000560599 DDX21Q9NR30 783 aaKnown RBP eCLIP23.64■■□□□ 1.37
HMBOX1-215ENST00000560599 PCDH11XQ9BZA7 1347 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms