RNA–Protein interactions for RNA: ENST00000560350.5

USP3-AS1-206, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 407 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-206ENST00000560350 JCADQ9P266 1359 aa10.82□□□□□ -0.68
USP3-AS1-206ENST00000560350 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
USP3-AS1-206ENST00000560350 SLC27A5Q9Y2P5 690 aa10.82□□□□□ -0.68
USP3-AS1-206ENST00000560350 NRXN3Q9Y4C0 1643 aa10.82□□□□□ -0.68
USP3-AS1-206ENST00000560350 MYO5BQ9ULV0 1848 aa10.81□□□□□ -0.68
USP3-AS1-206ENST00000560350 NEUROD1Q13562 356 aa10.81□□□□□ -0.68
USP3-AS1-206ENST00000560350 L3MBTL2Q969R5 705 aa10.81□□□□□ -0.68
USP3-AS1-206ENST00000560350 PRAM1Q96QH2 718 aa10.81□□□□□ -0.68
USP3-AS1-206ENST00000560350 TRAK1Q9UPV9 953 aa10.81□□□□□ -0.68
USP3-AS1-206ENST00000560350 SPATA31A6Q5VVP1 1343 aa10.81□□□□□ -0.68
USP3-AS1-206ENST00000560350 IRF6O14896 467 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 PRR20EP86478 221 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 PRR20CP86479 221 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 PRR20DP86480 221 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 PRR20BP86481 221 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 PRR20AP86496 221 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 ESCO1Q5FWF5 840 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 ZNF697Q5TEC3 545 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 MST1RQ04912 1400 aa10.8□□□□□ -0.68
USP3-AS1-206ENST00000560350 XRN1Q8IZH2 1706 aaKnown RBP10.79□□□□□ -0.68
USP3-AS1-206ENST00000560350 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
USP3-AS1-206ENST00000560350 CD46P15529 392 aa10.79□□□□□ -0.68
USP3-AS1-206ENST00000560350 FAM160A2Q8N612 972 aaPredicted RBP10.79□□□□□ -0.68
USP3-AS1-206ENST00000560350 C1orf167Q5SNV9 1468 aa10.79□□□□□ -0.68
USP3-AS1-206ENST00000560350 NPHP3Q7Z494 1330 aa10.79□□□□□ -0.68
USP3-AS1-206ENST00000560350 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
USP3-AS1-206ENST00000560350 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
USP3-AS1-206ENST00000560350 ORAI2Q96SN7 254 aa10.78□□□□□ -0.68
USP3-AS1-206ENST00000560350 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
USP3-AS1-206ENST00000560350 SOS2Q07890 1332 aaPredicted RBP10.78□□□□□ -0.68
USP3-AS1-206ENST00000560350 GDF9O60383 454 aa10.77□□□□□ -0.69
USP3-AS1-206ENST00000560350 PSME1Q06323 249 aa10.77□□□□□ -0.69
USP3-AS1-206ENST00000560350 CLSPNQ9HAW4 1339 aa10.77□□□□□ -0.69
USP3-AS1-206ENST00000560350 PPLO60437 1756 aa10.77□□□□□ -0.69
USP3-AS1-206ENST00000560350 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.69
USP3-AS1-206ENST00000560350 WASLO00401 505 aaPredicted RBP10.76□□□□□ -0.69
USP3-AS1-206ENST00000560350 PLEKHH1Q9ULM0 1364 aa10.76□□□□□ -0.69
USP3-AS1-206ENST00000560350 DLC1Q96QB1 1528 aa10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 FOXO3O43524 673 aa10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 SAFB2Q14151 953 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 NBPF1Q3BBV0 1214 aa10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 RNF19BQ6ZMZ0 732 aa10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 CCDC102AQ96A19 550 aa10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 PRDM9Q9NQV7 894 aa10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 FCF1Q9Y324 198 aaKnown RBP10.75□□□□□ -0.69
USP3-AS1-206ENST00000560350 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
USP3-AS1-206ENST00000560350 MDM2Q00987 491 aaPredicted RBP10.74□□□□□ -0.69
USP3-AS1-206ENST00000560350 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
USP3-AS1-206ENST00000560350 MSS51Q4VC12 460 aa10.74□□□□□ -0.69
USP3-AS1-206ENST00000560350 TONSLQ96HA7 1378 aa10.74□□□□□ -0.69
USP3-AS1-206ENST00000560350 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.73□□□□□ -0.69
USP3-AS1-206ENST00000560350 TNFRSF10AO00220 468 aa10.73□□□□□ -0.69
USP3-AS1-206ENST00000560350 RPIAP49247 311 aa10.73□□□□□ -0.69
USP3-AS1-206ENST00000560350 MEX3CQ5U5Q3 659 aaKnown RBP10.73□□□□□ -0.69
USP3-AS1-206ENST00000560350 ZNF772Q68DY9 489 aaPredicted RBP10.73□□□□□ -0.69
USP3-AS1-206ENST00000560350 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP3-AS1-206ENST00000560350 XIRP1Q702N8 1843 aaKnown RBP10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 DGAT1O75907 488 aa10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 KRT28Q7Z3Y7 464 aa10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 ASXL1Q8IXJ9 1541 aa10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 ADGRB1O14514 1584 aa10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 LAMC1P11047 1609 aa10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 ROBO1Q9Y6N7 1651 aa10.72□□□□□ -0.69
USP3-AS1-206ENST00000560350 KDM4AO75164 1064 aa10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 PKDCCQ504Y2 493 aa10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 AHDC1Q5TGY3 1603 aaPredicted RBP10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 ANKARQ7Z5J8 1434 aa10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 DDX17Q92841 729 aaKnown RBP10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 HIRIP3Q9BW71 556 aaPredicted RBP10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 CDK19Q9BWU1 502 aa10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 PKD2L1Q9P0L9 805 aa10.71□□□□□ -0.69
USP3-AS1-206ENST00000560350 MYT1Q01538 1121 aa10.7□□□□□ -0.7
USP3-AS1-206ENST00000560350 NUDT16Q96DE0 195 aaKnown RBP10.7□□□□□ -0.7
USP3-AS1-206ENST00000560350 SETD1AO15047 1707 aaKnown RBP10.7□□□□□ -0.7
USP3-AS1-206ENST00000560350 CDC42BPGQ6DT37 1551 aa10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 ROCK2O75116 1388 aaKnown RBP10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 GPRASP1Q5JY77 1395 aa10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 NUTM2BA6NNL0 878 aaPredicted RBP10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 NUTM2EB1AL46 878 aaPredicted RBP10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 Q3C1V9 767 aa10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 NUTM2AQ8IVF1 878 aaPredicted RBP10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 NGDNQ8NEJ9 315 aaKnown RBP10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 IFT172Q9UG01 1749 aa10.69□□□□□ -0.7
USP3-AS1-206ENST00000560350 PNPLA6Q8IY17 1366 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 SPATA31A3Q5VYP0 1347 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 NBPF8Q3BBV2 869 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 CARD11Q9BXL7 1154 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 GPCPD1Q9NPB8 672 aa10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 RGS17Q9UGC6 210 aaPredicted RBP10.68□□□□□ -0.7
USP3-AS1-206ENST00000560350 SBNO1A3KN83 1393 aa10.67□□□□□ -0.7
USP3-AS1-206ENST00000560350 EVC2Q86UK5 1308 aa10.67□□□□□ -0.7
USP3-AS1-206ENST00000560350 FAM187AA6NFU0 413 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms