RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, humanhuman

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-208ENST00000560328 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
NEO1-208ENST00000560328 CASTP20810 708 aaKnown RBP11.09□□□□□ -0.63
NEO1-208ENST00000560328 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
NEO1-208ENST00000560328 CCDC8Q9H0W5 538 aaPredicted RBP11.09□□□□□ -0.63
NEO1-208ENST00000560328 CARD14Q9BXL6 1004 aa11.09□□□□□ -0.63
NEO1-208ENST00000560328 TSPY26PQ9H489 355 aa11.09□□□□□ -0.63
NEO1-208ENST00000560328 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
NEO1-208ENST00000560328 ABCA5Q8WWZ7 1642 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 PI4KAP2A4QPH2 592 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 IGHDP01880 384 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 ATP2B2Q01814 1243 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 PI4KAP1Q8N8J0 262 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 ZBTB3Q9H5J0 574 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 IFIT5Q13325 482 aaKnown RBP11.08□□□□□ -0.64
NEO1-208ENST00000560328 EIF4A2Q14240 407 aaKnown RBP11.08□□□□□ -0.64
NEO1-208ENST00000560328 TRMT112Q9UI30 125 aaKnown RBP11.08□□□□□ -0.64
NEO1-208ENST00000560328 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 POLR3AO14802 1390 aaPredicted RBP11.08□□□□□ -0.64
NEO1-208ENST00000560328 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
NEO1-208ENST00000560328 ZPR1O75312 459 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 KRT85P78386 507 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 CIZ1Q9ULV3 898 aaPredicted RBP11.07□□□□□ -0.64
NEO1-208ENST00000560328 ARHGEF12Q9NZN5 1544 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 IFIT1P09914 478 aaKnown RBP11.07□□□□□ -0.64
NEO1-208ENST00000560328 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
NEO1-208ENST00000560328 IMMTQ16891 758 aaKnown RBP11.07□□□□□ -0.64
NEO1-208ENST00000560328 HSP90AB3PQ58FF7 597 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 NGLY1Q96IV0 654 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
NEO1-208ENST00000560328 JMYQ8N9B5 988 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 TRIM5Q9C035 493 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 MSH6P52701 1360 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 PIK3R4Q99570 1358 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 UBAC1Q9BSL1 405 aa11.07□□□□□ -0.64
NEO1-208ENST00000560328 ANXA1P04083 346 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 ME1P48163 572 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
NEO1-208ENST00000560328 FAM43AQ8N2R8 423 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 CCDC39Q9UFE4 941 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 RBM5P52756 815 aaKnown RBP eCLIP11.06□□□□□ -0.64
NEO1-208ENST00000560328 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 SNRPA1P09661 255 aaKnown RBP11.06□□□□□ -0.64
NEO1-208ENST00000560328 GPTP24298 496 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 TXLNAP40222 546 aa11.06□□□□□ -0.64
NEO1-208ENST00000560328 CDKL5O76039 1030 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 PDILTQ8N807 584 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 CCDC70Q6NSX1 233 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 PPP1R42Q7Z4L9 355 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
NEO1-208ENST00000560328 C8orf58Q8NAV2 365 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
NEO1-208ENST00000560328 ADGRL2O95490 1459 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 NPHP3Q7Z494 1330 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 MCM4P33991 863 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 A0A1W2PP64 1363 aa11.05□□□□□ -0.64
NEO1-208ENST00000560328 ABCC1P33527 1531 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 CAVIN4Q5BKX8 364 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 CDK5RAP3Q96JB5 506 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 NPATQ14207 1427 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 YTHDC2Q9H6S0 1430 aaKnown RBP11.04□□□□□ -0.64
NEO1-208ENST00000560328 ANKRD18BA2A2Z9 1011 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
NEO1-208ENST00000560328 CHPF2Q9P2E5 772 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 UBE3BQ7Z3V4 1068 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 DDX11Q96FC9 970 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 SPATA32Q96LK8 384 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 TNMDQ9H2S6 317 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 SMC2O95347 1197 aa11.04□□□□□ -0.64
NEO1-208ENST00000560328 MTHFSDQ2M296 383 aaKnown RBP11.04□□□□□ -0.64
NEO1-208ENST00000560328 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.04□□□□□ -0.64
NEO1-208ENST00000560328 CWC25Q9NXE8 425 aaPredicted RBP11.04□□□□□ -0.64
NEO1-208ENST00000560328 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 ECHDC1Q9NTX5 307 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 CCDC192P0DO97 292 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 ATP7AQ04656 1500 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 BMP2KLQ5H9B9 411 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
NEO1-208ENST00000560328 KCNA6P17658 529 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 AKAP4Q5JQC9 854 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 ZCRB1Q8TBF4 217 aaKnown RBP11.03□□□□□ -0.64
NEO1-208ENST00000560328 MEIS3Q99687 375 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 CFAP45Q9UL16 551 aa11.03□□□□□ -0.64
NEO1-208ENST00000560328 HMGB2P26583 209 aaKnown RBP11.02□□□□□ -0.64
NEO1-208ENST00000560328 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.64
NEO1-208ENST00000560328 TBC1D9Q6ZT07 1266 aa11.02□□□□□ -0.64
NEO1-208ENST00000560328 JARID2Q92833 1246 aaPredicted RBP11.02□□□□□ -0.64
NEO1-208ENST00000560328 LRRC59Q96AG4 307 aaKnown RBP11.02□□□□□ -0.64
NEO1-208ENST00000560328 FLT4P35916 1363 aa11.02□□□□□ -0.64
NEO1-208ENST00000560328 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.64
NEO1-208ENST00000560328 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.64
NEO1-208ENST00000560328 MAST1Q9Y2H9 1570 aa11.02□□□□□ -0.64
NEO1-208ENST00000560328 EPS15P42566 896 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms