RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 CHL1O00533 1208 aa17.78■□□□□ 0.44
HMBOX1-213ENST00000560269 TAF7Q15545 349 aaPredicted RBP17.78■□□□□ 0.44
HMBOX1-213ENST00000560269 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
HMBOX1-213ENST00000560269 KDM3BQ7LBC6 1761 aa17.78■□□□□ 0.44
HMBOX1-213ENST00000560269 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.44
HMBOX1-213ENST00000560269 RGS12O14924 1447 aa17.77■□□□□ 0.44
HMBOX1-213ENST00000560269 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
HMBOX1-213ENST00000560269 CABP4P57796 275 aa17.75■□□□□ 0.43
HMBOX1-213ENST00000560269 NFATC2IPQ8NCF5 419 aa17.75■□□□□ 0.43
HMBOX1-213ENST00000560269 MBIPQ9NS73 344 aa17.75■□□□□ 0.43
HMBOX1-213ENST00000560269 LAS1LQ9Y4W2 734 aaKnown RBP17.75■□□□□ 0.43
HMBOX1-213ENST00000560269 PAPPAQ13219 1627 aa17.74■□□□□ 0.43
HMBOX1-213ENST00000560269 KRT27Q7Z3Y8 459 aa17.74■□□□□ 0.43
HMBOX1-213ENST00000560269 TSR2Q969E8 191 aaKnown RBP17.74■□□□□ 0.43
HMBOX1-213ENST00000560269 SBF2Q86WG5 1849 aa17.73■□□□□ 0.43
HMBOX1-213ENST00000560269 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
HMBOX1-213ENST00000560269 NHSQ6T4R5 1651 aa17.73■□□□□ 0.43
HMBOX1-213ENST00000560269 BTBD11A6QL63 1104 aa17.72■□□□□ 0.43
HMBOX1-213ENST00000560269 TMOD3Q9NYL9 352 aa17.72■□□□□ 0.43
HMBOX1-213ENST00000560269 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
HMBOX1-213ENST00000560269 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
HMBOX1-213ENST00000560269 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
HMBOX1-213ENST00000560269 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
HMBOX1-213ENST00000560269 PIGBQ92521 554 aa17.7■□□□□ 0.42
HMBOX1-213ENST00000560269 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
HMBOX1-213ENST00000560269 FAM182BQ5T319 152 aa17.69■□□□□ 0.42
HMBOX1-213ENST00000560269 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
HMBOX1-213ENST00000560269 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
HMBOX1-213ENST00000560269 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
HMBOX1-213ENST00000560269 KCNQ3O43525 872 aa17.68■□□□□ 0.42
HMBOX1-213ENST00000560269 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
HMBOX1-213ENST00000560269 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
HMBOX1-213ENST00000560269 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
HMBOX1-213ENST00000560269 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
HMBOX1-213ENST00000560269 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
HMBOX1-213ENST00000560269 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
HMBOX1-213ENST00000560269 KCNQ2O43526 872 aa17.66■□□□□ 0.42
HMBOX1-213ENST00000560269 CT47B1P0C2W7 299 aaPredicted RBP17.66■□□□□ 0.42
HMBOX1-213ENST00000560269 C8orf58Q8NAV2 365 aa17.66■□□□□ 0.42
HMBOX1-213ENST00000560269 BTAF1O14981 1849 aa17.65■□□□□ 0.42
HMBOX1-213ENST00000560269 TTC5Q8N0Z6 440 aa17.65■□□□□ 0.42
HMBOX1-213ENST00000560269 ATG3Q9NT62 314 aa17.65■□□□□ 0.42
HMBOX1-213ENST00000560269 EP400Q96L91 3159 aa17.65■□□□□ 0.42
HMBOX1-213ENST00000560269 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
HMBOX1-213ENST00000560269 TSPYL6Q8N831 410 aa17.64■□□□□ 0.41
HMBOX1-213ENST00000560269 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
HMBOX1-213ENST00000560269 VAMP4O75379 141 aa17.63■□□□□ 0.41
HMBOX1-213ENST00000560269 HOXB7P09629 217 aa17.63■□□□□ 0.41
HMBOX1-213ENST00000560269 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
HMBOX1-213ENST00000560269 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
HMBOX1-213ENST00000560269 ZNF496Q96IT1 587 aaPredicted RBP17.63■□□□□ 0.41
HMBOX1-213ENST00000560269 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
HMBOX1-213ENST00000560269 BCL11BQ9C0K0 894 aaPredicted RBP17.63■□□□□ 0.41
HMBOX1-213ENST00000560269 C5P01031 1676 aa17.62■□□□□ 0.41
HMBOX1-213ENST00000560269 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
HMBOX1-213ENST00000560269 ZNF428Q96B54 188 aa17.62■□□□□ 0.41
HMBOX1-213ENST00000560269 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
HMBOX1-213ENST00000560269 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
HMBOX1-213ENST00000560269 GIGYF1O75420 1035 aaPredicted RBP17.61■□□□□ 0.41
HMBOX1-213ENST00000560269 SMARCC1Q92922 1105 aaPredicted RBP17.61■□□□□ 0.41
HMBOX1-213ENST00000560269 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
HMBOX1-213ENST00000560269 ELL2O00472 640 aaPredicted RBP17.6■□□□□ 0.41
HMBOX1-213ENST00000560269 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
HMBOX1-213ENST00000560269 LY75O60449 1722 aa17.59■□□□□ 0.41
HMBOX1-213ENST00000560269 PALLDQ8WX93 1383 aa17.59■□□□□ 0.41
HMBOX1-213ENST00000560269 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
HMBOX1-213ENST00000560269 RCAN3Q9UKA8 241 aa17.59■□□□□ 0.41
HMBOX1-213ENST00000560269 PTCD1O75127 700 aaKnown RBP17.58■□□□□ 0.4
HMBOX1-213ENST00000560269 TRIM37O94972 964 aa17.58■□□□□ 0.4
HMBOX1-213ENST00000560269 RARSP54136 660 aaKnown RBP17.58■□□□□ 0.4
HMBOX1-213ENST00000560269 TJP1Q07157 1748 aa17.58■□□□□ 0.4
HMBOX1-213ENST00000560269 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.4
HMBOX1-213ENST00000560269 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
HMBOX1-213ENST00000560269 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
HMBOX1-213ENST00000560269 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
HMBOX1-213ENST00000560269 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
HMBOX1-213ENST00000560269 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
HMBOX1-213ENST00000560269 TEX13AQ9BXU3 409 aaPredicted RBP17.55■□□□□ 0.4
HMBOX1-213ENST00000560269 CACNA1FO60840 1977 aa17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 BRPF1P55201 1214 aaPredicted RBP17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 SIK1P57059 783 aa17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 HDGFL1Q5TGJ6 251 aa17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 SSH1Q8WYL5 1049 aa17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
HMBOX1-213ENST00000560269 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
HMBOX1-213ENST00000560269 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
HMBOX1-213ENST00000560269 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
HMBOX1-213ENST00000560269 BCAR3O75815 825 aa17.52■□□□□ 0.4
HMBOX1-213ENST00000560269 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.4
HMBOX1-213ENST00000560269 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
HMBOX1-213ENST00000560269 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.4
HMBOX1-213ENST00000560269 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
HMBOX1-213ENST00000560269 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
HMBOX1-213ENST00000560269 RREB1Q92766 1687 aa17.51■□□□□ 0.39
HMBOX1-213ENST00000560269 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
HMBOX1-213ENST00000560269 RNF123Q5XPI4 1314 aa17.5■□□□□ 0.39
HMBOX1-213ENST00000560269 TAF1LQ8IZX4 1826 aa17.5■□□□□ 0.39
HMBOX1-213ENST00000560269 PLSCR1O15162 318 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms