RNA–Protein interactions for RNA: ENST00000560240.5

COPS2-207, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-207ENST00000560240 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
COPS2-207ENST00000560240 PAPPAQ13219 1627 aa10.5□□□□□ -0.73
COPS2-207ENST00000560240 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
COPS2-207ENST00000560240 KAT6BQ8WYB5 2073 aa10.49□□□□□ -0.73
COPS2-207ENST00000560240 CICQ96RK0 1608 aaPredicted RBP10.49□□□□□ -0.73
COPS2-207ENST00000560240 SOCS7O14512 581 aa10.49□□□□□ -0.73
COPS2-207ENST00000560240 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
COPS2-207ENST00000560240 MCM10Q7L590 875 aa10.49□□□□□ -0.73
COPS2-207ENST00000560240 NFATC2IPQ8NCF5 419 aa10.49□□□□□ -0.73
COPS2-207ENST00000560240 SMARCC1Q92922 1105 aaPredicted RBP10.49□□□□□ -0.73
COPS2-207ENST00000560240 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
COPS2-207ENST00000560240 LY75O60449 1722 aa10.48□□□□□ -0.73
COPS2-207ENST00000560240 APBA3O96018 575 aa10.48□□□□□ -0.73
COPS2-207ENST00000560240 BAG6P46379 1132 aa10.48□□□□□ -0.73
COPS2-207ENST00000560240 TAF7Q15545 349 aaPredicted RBP10.48□□□□□ -0.73
COPS2-207ENST00000560240 PTF1AQ7RTS3 328 aa10.48□□□□□ -0.73
COPS2-207ENST00000560240 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
COPS2-207ENST00000560240 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
COPS2-207ENST00000560240 WWC1Q8IX03 1113 aa10.47□□□□□ -0.73
COPS2-207ENST00000560240 CAMKK2Q96RR4 588 aa10.47□□□□□ -0.73
COPS2-207ENST00000560240 ATG3Q9NT62 314 aa10.47□□□□□ -0.73
COPS2-207ENST00000560240 RRP7AQ9Y3A4 280 aaKnown RBP10.47□□□□□ -0.73
COPS2-207ENST00000560240 IL16Q14005 1332 aa10.47□□□□□ -0.73
COPS2-207ENST00000560240 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
COPS2-207ENST00000560240 DCTN1Q14203 1278 aa10.46□□□□□ -0.73
COPS2-207ENST00000560240 NEUROD2Q15784 382 aa10.46□□□□□ -0.73
COPS2-207ENST00000560240 ZNF790Q6PG37 636 aa10.46□□□□□ -0.73
COPS2-207ENST00000560240 WDR63Q8IWG1 891 aa10.46□□□□□ -0.73
COPS2-207ENST00000560240 ASAP1Q9ULH1 1129 aa10.46□□□□□ -0.73
COPS2-207ENST00000560240 ZNF521Q96K83 1311 aa10.46□□□□□ -0.73
COPS2-207ENST00000560240 RREB1Q92766 1687 aa10.46□□□□□ -0.74
COPS2-207ENST00000560240 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
COPS2-207ENST00000560240 KCPQ6ZWJ8 1503 aa10.45□□□□□ -0.74
COPS2-207ENST00000560240 BTBD11A6QL63 1104 aa10.45□□□□□ -0.74
COPS2-207ENST00000560240 CHL1O00533 1208 aa10.45□□□□□ -0.74
COPS2-207ENST00000560240 ZNF853P0CG23 659 aa10.45□□□□□ -0.74
COPS2-207ENST00000560240 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
COPS2-207ENST00000560240 CFAP44Q96MT7 982 aa10.45□□□□□ -0.74
COPS2-207ENST00000560240 HEG1Q9ULI3 1381 aa10.44□□□□□ -0.74
COPS2-207ENST00000560240 LOC102724428A0A0B4J2F2 783 aa10.44□□□□□ -0.74
COPS2-207ENST00000560240 SIK1P57059 783 aa10.44□□□□□ -0.74
COPS2-207ENST00000560240 PROM2Q8N271 834 aa10.44□□□□□ -0.74
COPS2-207ENST00000560240 THUMPD2Q9BTF0 503 aaKnown RBP10.44□□□□□ -0.74
COPS2-207ENST00000560240 IFT57Q9NWB7 429 aa10.44□□□□□ -0.74
COPS2-207ENST00000560240 GNAI1P63096 354 aa10.43□□□□□ -0.74
COPS2-207ENST00000560240 EN1Q05925 392 aaPredicted RBP10.43□□□□□ -0.74
COPS2-207ENST00000560240 TXNRD1Q16881 649 aa10.43□□□□□ -0.74
COPS2-207ENST00000560240 DEFB132Q7Z7B7 95 aa10.43□□□□□ -0.74
COPS2-207ENST00000560240 TTC5Q8N0Z6 440 aa10.43□□□□□ -0.74
COPS2-207ENST00000560240 NUP188Q5SRE5 1749 aa10.42□□□□□ -0.74
COPS2-207ENST00000560240 C5P01031 1676 aa10.42□□□□□ -0.74
COPS2-207ENST00000560240 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
COPS2-207ENST00000560240 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
COPS2-207ENST00000560240 TEX13AQ9BXU3 409 aaPredicted RBP10.42□□□□□ -0.74
COPS2-207ENST00000560240 TSPYL4Q9UJ04 414 aa10.42□□□□□ -0.74
COPS2-207ENST00000560240 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
COPS2-207ENST00000560240 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
COPS2-207ENST00000560240 SOS1Q07889 1333 aaPredicted RBP10.41□□□□□ -0.74
COPS2-207ENST00000560240 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
COPS2-207ENST00000560240 ZNF496Q96IT1 587 aaPredicted RBP10.41□□□□□ -0.74
COPS2-207ENST00000560240 LRRC4BQ9NT99 713 aa10.41□□□□□ -0.74
COPS2-207ENST00000560240 TAF1LQ8IZX4 1826 aa10.41□□□□□ -0.74
COPS2-207ENST00000560240 TJP1Q07157 1748 aa10.41□□□□□ -0.74
COPS2-207ENST00000560240 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
COPS2-207ENST00000560240 HOXB7P09629 217 aa10.4□□□□□ -0.74
COPS2-207ENST00000560240 EIF4A1P60842 406 aaKnown RBP10.4□□□□□ -0.74
COPS2-207ENST00000560240 SLC4A9Q96Q91 983 aa10.4□□□□□ -0.74
COPS2-207ENST00000560240 ZBED9Q6R2W3 1325 aa10.39□□□□□ -0.75
COPS2-207ENST00000560240 CNTNAP4Q9C0A0 1308 aa10.39□□□□□ -0.75
COPS2-207ENST00000560240 KCNQ3O43525 872 aa10.39□□□□□ -0.75
COPS2-207ENST00000560240 SNRPA1P09661 255 aaKnown RBP10.39□□□□□ -0.75
COPS2-207ENST00000560240 ATP6V1AP38606 617 aa10.39□□□□□ -0.75
COPS2-207ENST00000560240 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
COPS2-207ENST00000560240 RC3H1Q5TC82 1133 aaKnown RBP10.39□□□□□ -0.75
COPS2-207ENST00000560240 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
COPS2-207ENST00000560240 MYH16Q9H6N6 1097 aa10.39□□□□□ -0.75
COPS2-207ENST00000560240 MBIPQ9NS73 344 aa10.39□□□□□ -0.75
COPS2-207ENST00000560240 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
COPS2-207ENST00000560240 E9PSI1 815 aa10.38□□□□□ -0.75
COPS2-207ENST00000560240 GIGYF1O75420 1035 aaPredicted RBP10.38□□□□□ -0.75
COPS2-207ENST00000560240 HNRNPUQ00839 825 aaKnown RBP eCLIP10.38□□□□□ -0.75
COPS2-207ENST00000560240 ITPK1Q13572 414 aa10.38□□□□□ -0.75
COPS2-207ENST00000560240 TRMT2AQ8IZ69 625 aaKnown RBP10.38□□□□□ -0.75
COPS2-207ENST00000560240 CHMP4AQ9BY43 222 aa10.38□□□□□ -0.75
COPS2-207ENST00000560240 MIS18AQ9NYP9 233 aa10.38□□□□□ -0.75
COPS2-207ENST00000560240 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
COPS2-207ENST00000560240 QSER1Q2KHR3 1735 aa10.38□□□□□ -0.75
COPS2-207ENST00000560240 STARD3NLO95772 234 aa10.37□□□□□ -0.75
COPS2-207ENST00000560240 CYP19A1P11511 503 aaPredicted RBP10.37□□□□□ -0.75
COPS2-207ENST00000560240 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
COPS2-207ENST00000560240 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
COPS2-207ENST00000560240 SALL2Q9Y467 1007 aaPredicted RBP10.37□□□□□ -0.75
COPS2-207ENST00000560240 ERBB4Q15303 1308 aa10.36□□□□□ -0.75
COPS2-207ENST00000560240 FANCIQ9NVI1 1328 aa10.36□□□□□ -0.75
COPS2-207ENST00000560240 SLFN5Q08AF3 891 aa10.36□□□□□ -0.75
COPS2-207ENST00000560240 SLC15A2Q16348 729 aa10.36□□□□□ -0.75
COPS2-207ENST00000560240 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
COPS2-207ENST00000560240 DNAJC10Q8IXB1 793 aa10.36□□□□□ -0.75
COPS2-207ENST00000560240 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
COPS2-207ENST00000560240 LAS1LQ9Y4W2 734 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms