RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CCDC184Q52MB2 194 aa15.84■□□□□ 0.13
RABGGTA-215ENST00000560207 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
RABGGTA-215ENST00000560207 NFATC2IPQ8NCF5 419 aa15.83■□□□□ 0.12
RABGGTA-215ENST00000560207 PIGBQ92521 554 aa15.83■□□□□ 0.12
RABGGTA-215ENST00000560207 CAMKK2Q96RR4 588 aa15.83■□□□□ 0.12
RABGGTA-215ENST00000560207 CCDC27Q2M243 656 aa15.82■□□□□ 0.12
RABGGTA-215ENST00000560207 IL17REQ8NFR9 667 aa15.82■□□□□ 0.12
RABGGTA-215ENST00000560207 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
RABGGTA-215ENST00000560207 EN1Q05925 392 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-215ENST00000560207 PAPPAQ13219 1627 aa15.81■□□□□ 0.12
RABGGTA-215ENST00000560207 NBPF14Q5TI25 921 aa15.81■□□□□ 0.12
RABGGTA-215ENST00000560207 CCDC146Q8IYE0 955 aa15.81■□□□□ 0.12
RABGGTA-215ENST00000560207 FAM9BQ8IZU0 186 aa15.81■□□□□ 0.12
RABGGTA-215ENST00000560207 CICQ96RK0 1608 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-215ENST00000560207 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
RABGGTA-215ENST00000560207 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
RABGGTA-215ENST00000560207 TAF7Q15545 349 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-215ENST00000560207 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
RABGGTA-215ENST00000560207 MIER1Q8N108 512 aa15.8■□□□□ 0.12
RABGGTA-215ENST00000560207 TAF1LQ8IZX4 1826 aa15.8■□□□□ 0.12
RABGGTA-215ENST00000560207 APAF1O14727 1248 aa15.79■□□□□ 0.12
RABGGTA-215ENST00000560207 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
RABGGTA-215ENST00000560207 NUP188Q5SRE5 1749 aa15.79■□□□□ 0.12
RABGGTA-215ENST00000560207 DEFB132Q7Z7B7 95 aa15.78■□□□□ 0.12
RABGGTA-215ENST00000560207 VSIG10Q8N0Z9 540 aa15.78■□□□□ 0.12
RABGGTA-215ENST00000560207 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
RABGGTA-215ENST00000560207 ATG3Q9NT62 314 aa15.78■□□□□ 0.12
RABGGTA-215ENST00000560207 C5P01031 1676 aa15.77■□□□□ 0.12
RABGGTA-215ENST00000560207 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
RABGGTA-215ENST00000560207 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
RABGGTA-215ENST00000560207 MCM10Q7L590 875 aa15.77■□□□□ 0.12
RABGGTA-215ENST00000560207 PTF1AQ7RTS3 328 aa15.77■□□□□ 0.12
RABGGTA-215ENST00000560207 CCNL1Q9UK58 526 aaPredicted RBP15.77■□□□□ 0.12
RABGGTA-215ENST00000560207 KDM3BQ7LBC6 1761 aa15.77■□□□□ 0.11
RABGGTA-215ENST00000560207 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
RABGGTA-215ENST00000560207 ZNF790Q6PG37 636 aa15.76■□□□□ 0.11
RABGGTA-215ENST00000560207 ASAP1Q9ULH1 1129 aa15.76■□□□□ 0.11
RABGGTA-215ENST00000560207 QSER1Q2KHR3 1735 aa15.76■□□□□ 0.11
RABGGTA-215ENST00000560207 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
RABGGTA-215ENST00000560207 SIK1P57059 783 aa15.75■□□□□ 0.11
RABGGTA-215ENST00000560207 CHMP4AQ9BY43 222 aa15.75■□□□□ 0.11
RABGGTA-215ENST00000560207 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
RABGGTA-215ENST00000560207 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
RABGGTA-215ENST00000560207 COL5A3P25940 1745 aaPredicted RBP15.74■□□□□ 0.11
RABGGTA-215ENST00000560207 IL16Q14005 1332 aa15.73■□□□□ 0.11
RABGGTA-215ENST00000560207 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
RABGGTA-215ENST00000560207 GNAI1P63096 354 aa15.73■□□□□ 0.11
RABGGTA-215ENST00000560207 WDR63Q8IWG1 891 aa15.73■□□□□ 0.11
RABGGTA-215ENST00000560207 PROM2Q8N271 834 aa15.73■□□□□ 0.11
RABGGTA-215ENST00000560207 RRP7AQ9Y3A4 280 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-215ENST00000560207 DCTN1Q14203 1278 aa15.72■□□□□ 0.11
RABGGTA-215ENST00000560207 FLAD1Q8NFF5 587 aa15.72■□□□□ 0.11
RABGGTA-215ENST00000560207 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
RABGGTA-215ENST00000560207 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-215ENST00000560207 IFT57Q9NWB7 429 aa15.72■□□□□ 0.11
RABGGTA-215ENST00000560207 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
RABGGTA-215ENST00000560207 STARD3NLO95772 234 aa15.71■□□□□ 0.11
RABGGTA-215ENST00000560207 RC3H1Q5TC82 1133 aaKnown RBP15.71■□□□□ 0.11
RABGGTA-215ENST00000560207 WWC1Q8IX03 1113 aa15.71■□□□□ 0.11
RABGGTA-215ENST00000560207 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
RABGGTA-215ENST00000560207 C4BP0C0L5 1744 aa15.71■□□□□ 0.1
RABGGTA-215ENST00000560207 CHL1O00533 1208 aa15.7■□□□□ 0.1
RABGGTA-215ENST00000560207 PTCD1O75127 700 aaKnown RBP15.7■□□□□ 0.1
RABGGTA-215ENST00000560207 TSPYL4Q9UJ04 414 aa15.7■□□□□ 0.1
RABGGTA-215ENST00000560207 TJP1Q07157 1748 aa15.7■□□□□ 0.1
RABGGTA-215ENST00000560207 HEG1Q9ULI3 1381 aa15.7■□□□□ 0.1
RABGGTA-215ENST00000560207 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
RABGGTA-215ENST00000560207 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
RABGGTA-215ENST00000560207 SNRPA1P09661 255 aaKnown RBP15.69■□□□□ 0.1
RABGGTA-215ENST00000560207 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
RABGGTA-215ENST00000560207 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
RABGGTA-215ENST00000560207 SLC15A2Q16348 729 aa15.68■□□□□ 0.1
RABGGTA-215ENST00000560207 ZNF496Q96IT1 587 aaPredicted RBP15.68■□□□□ 0.1
RABGGTA-215ENST00000560207 LRRC4BQ9NT99 713 aa15.68■□□□□ 0.1
RABGGTA-215ENST00000560207 UBR3Q6ZT12 1888 aa15.67■□□□□ 0.1
RABGGTA-215ENST00000560207 HOXB7P09629 217 aa15.67■□□□□ 0.1
RABGGTA-215ENST00000560207 ZNF853P0CG23 659 aa15.67■□□□□ 0.1
RABGGTA-215ENST00000560207 ADRA2BP18089 450 aa15.67■□□□□ 0.1
RABGGTA-215ENST00000560207 AK7Q96M32 723 aa15.67■□□□□ 0.1
RABGGTA-215ENST00000560207 CACNA1FO60840 1977 aa15.67■□□□□ 0.1
RABGGTA-215ENST00000560207 AKT1S1Q96B36 256 aa15.66■□□□□ 0.1
RABGGTA-215ENST00000560207 THUMPD2Q9BTF0 503 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-215ENST00000560207 MYH16Q9H6N6 1097 aa15.66■□□□□ 0.1
RABGGTA-215ENST00000560207 SSFA2P28290 1259 aa15.65■□□□□ 0.1
RABGGTA-215ENST00000560207 EIF4A1P60842 406 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-215ENST00000560207 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-215ENST00000560207 SLC16A10Q8TF71 515 aa15.65■□□□□ 0.1
RABGGTA-215ENST00000560207 TFCP2L1Q9NZI6 479 aa15.65■□□□□ 0.1
RABGGTA-215ENST00000560207 MYH14Q7Z406 1995 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-215ENST00000560207 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
RABGGTA-215ENST00000560207 ITPK1Q13572 414 aa15.64■□□□□ 0.09
RABGGTA-215ENST00000560207 SLC4A9Q96Q91 983 aa15.64■□□□□ 0.09
RABGGTA-215ENST00000560207 RTCBQ9Y3I0 505 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-215ENST00000560207 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-215ENST00000560207 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
RABGGTA-215ENST00000560207 GIGYF1O75420 1035 aaPredicted RBP15.63■□□□□ 0.09
RABGGTA-215ENST00000560207 CYP19A1P11511 503 aaPredicted RBP15.63■□□□□ 0.09
RABGGTA-215ENST00000560207 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
RABGGTA-215ENST00000560207 CCDC87Q9NVE4 849 aa15.63■□□□□ 0.09
RABGGTA-215ENST00000560207 A0A087WZG4 1122 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms