RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 TONSLQ96HA7 1378 aa8.89□□□□□ -0.99
CLPX-206ENST00000560166 FUT2Q10981 343 aa8.89□□□□□ -0.99
CLPX-206ENST00000560166 NEURL4Q96JN8 1562 aa8.89□□□□□ -0.99
CLPX-206ENST00000560166 TRPM2O94759 1503 aa8.89□□□□□ -0.99
CLPX-206ENST00000560166 CCDC144AA2RUR9 1427 aa8.88□□□□□ -0.99
CLPX-206ENST00000560166 H3BM21 787 aa8.88□□□□□ -0.99
CLPX-206ENST00000560166 SIN3AQ96ST3 1273 aa8.88□□□□□ -0.99
CLPX-206ENST00000560166 REPIN1Q9BWE0 567 aaKnown RBP8.88□□□□□ -0.99
CLPX-206ENST00000560166 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
CLPX-206ENST00000560166 SETD1AO15047 1707 aaKnown RBP8.88□□□□□ -0.99
CLPX-206ENST00000560166 IRF6O14896 467 aa8.87□□□□□ -0.99
CLPX-206ENST00000560166 GNPATO15228 680 aa8.87□□□□□ -0.99
CLPX-206ENST00000560166 FCHSD2O94868 740 aa8.87□□□□□ -0.99
CLPX-206ENST00000560166 POLR1AO95602 1720 aaPredicted RBP8.87□□□□□ -0.99
CLPX-206ENST00000560166 A2ML1A8K2U0 1454 aa8.87□□□□□ -0.99
CLPX-206ENST00000560166 ALKQ9UM73 1620 aa8.87□□□□□ -0.99
CLPX-206ENST00000560166 WASHC2CQ9Y4E1 1318 aa8.86□□□□□ -0.99
CLPX-206ENST00000560166 PPP1R15AO75807 674 aaPredicted RBP8.86□□□□□ -0.99
CLPX-206ENST00000560166 FECHP22830 423 aa8.86□□□□□ -0.99
CLPX-206ENST00000560166 ANKLE2Q86XL3 938 aa8.86□□□□□ -0.99
CLPX-206ENST00000560166 E9PCH4 1651 aa8.85□□□□□ -0.99
CLPX-206ENST00000560166 NEUROD1Q13562 356 aa8.85□□□□□ -0.99
CLPX-206ENST00000560166 HOMEZQ8IX15 550 aa8.85□□□□□ -0.99
CLPX-206ENST00000560166 NOS1P29475 1434 aa8.85□□□□□ -0.99
CLPX-206ENST00000560166 ERBB4Q15303 1308 aa8.84□□□□□ -0.99
CLPX-206ENST00000560166 NPHP4O75161 1426 aaPredicted RBP8.84□□□□□ -0.99
CLPX-206ENST00000560166 MMP16P51512 607 aa8.84□□□□□ -0.99
CLPX-206ENST00000560166 HIC1Q14526 733 aa8.84□□□□□ -0.99
CLPX-206ENST00000560166 METTL3Q86U44 580 aaKnown RBP8.84□□□□□ -0.99
CLPX-206ENST00000560166 SPATA31E1Q6ZUB1 1445 aa8.83□□□□□ -1
CLPX-206ENST00000560166 KCNMA1Q12791 1236 aa8.83□□□□□ -1
CLPX-206ENST00000560166 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
CLPX-206ENST00000560166 LRRC7Q96NW7 1537 aa8.82□□□□□ -1
CLPX-206ENST00000560166 PLEKHG3A1L390 1219 aa8.82□□□□□ -1
CLPX-206ENST00000560166 GCGRP47871 477 aa8.82□□□□□ -1
CLPX-206ENST00000560166 VEGFBP49765 207 aa8.82□□□□□ -1
CLPX-206ENST00000560166 AMHR2Q16671 573 aa8.82□□□□□ -1
CLPX-206ENST00000560166 RC3H1Q5TC82 1133 aaKnown RBP8.82□□□□□ -1
CLPX-206ENST00000560166 RDH13Q8NBN7 331 aa8.82□□□□□ -1
CLPX-206ENST00000560166 L3MBTL2Q969R5 705 aa8.82□□□□□ -1
CLPX-206ENST00000560166 TNRQ92752 1358 aa8.82□□□□□ -1
CLPX-206ENST00000560166 SPHKAPQ2M3C7 1700 aa8.82□□□□□ -1
CLPX-206ENST00000560166 GSK3AP49840 483 aa8.81□□□□□ -1
CLPX-206ENST00000560166 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
CLPX-206ENST00000560166 FBXO31Q5XUX0 539 aaPredicted RBP8.81□□□□□ -1
CLPX-206ENST00000560166 RNF19BQ6ZMZ0 732 aa8.81□□□□□ -1
CLPX-206ENST00000560166 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
CLPX-206ENST00000560166 THEMISQ8N1K5 641 aaPredicted RBP8.81□□□□□ -1
CLPX-206ENST00000560166 DDRGK1Q96HY6 314 aa8.81□□□□□ -1
CLPX-206ENST00000560166 SLC52A1Q9NWF4 448 aa8.81□□□□□ -1
CLPX-206ENST00000560166 ERVK-7P63135 1459 aa8.8□□□□□ -1
CLPX-206ENST00000560166 CEP152O94986 1710 aa8.8□□□□□ -1
CLPX-206ENST00000560166 SYNMO15061 1565 aa8.79□□□□□ -1
CLPX-206ENST00000560166 WNT7BP56706 349 aa8.79□□□□□ -1
CLPX-206ENST00000560166 SKOR1P84550 965 aa8.79□□□□□ -1
CLPX-206ENST00000560166 KCTD17Q8N5Z5 321 aa8.79□□□□□ -1
CLPX-206ENST00000560166 PIK3C2BO00750 1634 aa8.79□□□□□ -1
CLPX-206ENST00000560166 CLTCL1P53675 1640 aa8.79□□□□□ -1
CLPX-206ENST00000560166 ADGRB3O60242 1522 aa8.79□□□□□ -1
CLPX-206ENST00000560166 RPGRIP1LQ68CZ1 1315 aa8.79□□□□□ -1
CLPX-206ENST00000560166 MYOM2P54296 1465 aa8.78□□□□□ -1
CLPX-206ENST00000560166 ZMYND15Q9H091 742 aa8.78□□□□□ -1
CLPX-206ENST00000560166 IQGAP1P46940 1657 aa8.78□□□□□ -1
CLPX-206ENST00000560166 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
CLPX-206ENST00000560166 RALGAPBQ86X10 1494 aa8.77□□□□□ -1
CLPX-206ENST00000560166 STRCP1A6NGW2 1772 aa8.77□□□□□ -1.01
CLPX-206ENST00000560166 DDX11L8A8MPP1 907 aa8.77□□□□□ -1.01
CLPX-206ENST00000560166 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
CLPX-206ENST00000560166 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
CLPX-206ENST00000560166 BMP1P13497 986 aa8.76□□□□□ -1.01
CLPX-206ENST00000560166 PRAG1Q86YV5 1406 aa8.76□□□□□ -1.01
CLPX-206ENST00000560166 MED14O60244 1454 aa8.76□□□□□ -1.01
CLPX-206ENST00000560166 GPRASP1Q5JY77 1395 aa8.75□□□□□ -1.01
CLPX-206ENST00000560166 ZFYVE9O95405 1425 aa8.75□□□□□ -1.01
CLPX-206ENST00000560166 CAPN5O15484 640 aaPredicted RBP8.75□□□□□ -1.01
CLPX-206ENST00000560166 DXOO77932 396 aaKnown RBP8.75□□□□□ -1.01
CLPX-206ENST00000560166 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
CLPX-206ENST00000560166 NRXN1Q9ULB1 1477 aa8.75□□□□□ -1.01
CLPX-206ENST00000560166 FAM135BQ49AJ0 1406 aa8.74□□□□□ -1.01
CLPX-206ENST00000560166 SIAH2O43255 324 aa8.74□□□□□ -1.01
CLPX-206ENST00000560166 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
CLPX-206ENST00000560166 Q3C1V9 767 aa8.74□□□□□ -1.01
CLPX-206ENST00000560166 GRIPAP1Q4V328 841 aa8.74□□□□□ -1.01
CLPX-206ENST00000560166 DCAF11Q8TEB1 546 aa8.74□□□□□ -1.01
CLPX-206ENST00000560166 NLRP1Q9C000 1473 aa8.74□□□□□ -1.01
CLPX-206ENST00000560166 KDM5AP29375 1690 aaKnown RBP8.73□□□□□ -1.01
CLPX-206ENST00000560166 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
CLPX-206ENST00000560166 SULF1Q8IWU6 871 aa8.73□□□□□ -1.01
CLPX-206ENST00000560166 IDI1Q13907 227 aa8.72□□□□□ -1.01
CLPX-206ENST00000560166 ZNF772Q68DY9 489 aaPredicted RBP8.72□□□□□ -1.01
CLPX-206ENST00000560166 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
CLPX-206ENST00000560166 LAMC1P11047 1609 aa8.72□□□□□ -1.01
CLPX-206ENST00000560166 ROBO1Q9Y6N7 1651 aa8.72□□□□□ -1.01
CLPX-206ENST00000560166 MS4A1P11836 297 aa8.71□□□□□ -1.02
CLPX-206ENST00000560166 EIF4G2P78344 907 aaKnown RBP eCLIP8.71□□□□□ -1.02
CLPX-206ENST00000560166 RGL3Q3MIN7 710 aa8.71□□□□□ -1.02
CLPX-206ENST00000560166 TMEM151AQ8N4L1 468 aa8.71□□□□□ -1.02
CLPX-206ENST00000560166 ZFP42Q96MM3 310 aa8.71□□□□□ -1.02
CLPX-206ENST00000560166 USB1Q9BQ65 265 aaKnown RBP8.71□□□□□ -1.02
CLPX-206ENST00000560166 JCADQ9P266 1359 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms