RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 RGPD3A6NKT7 1758 aaPredicted RBP15.01□□□□□ -0.01
RORA-212ENST00000560004 RGPD4Q7Z3J3 1758 aa15.01□□□□□ -0.01
RORA-212ENST00000560004 LY75O60449 1722 aa15□□□□□ -0.01
RORA-212ENST00000560004 ZBED9Q6R2W3 1325 aa15□□□□□ -0.01
RORA-212ENST00000560004 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
RORA-212ENST00000560004 KCNQ2O43526 872 aa15□□□□□ -0.01
RORA-212ENST00000560004 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
RORA-212ENST00000560004 C5P01031 1676 aa15□□□□□ -0.01
RORA-212ENST00000560004 FAM196AQ6ZSG2 479 aa14.99□□□□□ -0.01
RORA-212ENST00000560004 KAT6BQ8WYB5 2073 aa14.99□□□□□ -0.01
RORA-212ENST00000560004 TJP1Q07157 1748 aa14.98□□□□□ -0.01
RORA-212ENST00000560004 PRIM1P49642 420 aaKnown RBP14.98□□□□□ -0.01
RORA-212ENST00000560004 PIGBQ92521 554 aa14.98□□□□□ -0.01
RORA-212ENST00000560004 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
RORA-212ENST00000560004 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
RORA-212ENST00000560004 ZNF853P0CG23 659 aa14.97□□□□□ -0.01
RORA-212ENST00000560004 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
RORA-212ENST00000560004 IL16Q14005 1332 aa14.96□□□□□ -0.01
RORA-212ENST00000560004 CABP4P57796 275 aa14.96□□□□□ -0.01
RORA-212ENST00000560004 TEFQ10587 303 aa14.96□□□□□ -0.01
RORA-212ENST00000560004 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
RORA-212ENST00000560004 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
RORA-212ENST00000560004 NFATC2IPQ8NCF5 419 aa14.96□□□□□ -0.01
RORA-212ENST00000560004 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
RORA-212ENST00000560004 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
RORA-212ENST00000560004 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
RORA-212ENST00000560004 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
RORA-212ENST00000560004 IFT57Q9NWB7 429 aa14.95□□□□□ -0.02
RORA-212ENST00000560004 RREB1Q92766 1687 aa14.95□□□□□ -0.02
RORA-212ENST00000560004 TAF7Q15545 349 aaPredicted RBP14.94□□□□□ -0.02
RORA-212ENST00000560004 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
RORA-212ENST00000560004 TAF1LQ8IZX4 1826 aa14.94□□□□□ -0.02
RORA-212ENST00000560004 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 CHL1O00533 1208 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 KCNQ3O43525 872 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 TRIM37O94972 964 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
RORA-212ENST00000560004 SLC39A6Q13433 755 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 CFAP44Q96MT7 982 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 MBIPQ9NS73 344 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 ATG3Q9NT62 314 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 MIS18AQ9NYP9 233 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 ASAP1Q9ULH1 1129 aa14.93□□□□□ -0.02
RORA-212ENST00000560004 BTBD11A6QL63 1104 aa14.92□□□□□ -0.02
RORA-212ENST00000560004 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
RORA-212ENST00000560004 TSR2Q969E8 191 aaKnown RBP14.92□□□□□ -0.02
RORA-212ENST00000560004 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
RORA-212ENST00000560004 PALLDQ8WX93 1383 aa14.92□□□□□ -0.02
RORA-212ENST00000560004 HEG1Q9ULI3 1381 aa14.92□□□□□ -0.02
RORA-212ENST00000560004 GNAI1P63096 354 aa14.91□□□□□ -0.02
RORA-212ENST00000560004 SLFN5Q08AF3 891 aa14.91□□□□□ -0.02
RORA-212ENST00000560004 ZNF790Q6PG37 636 aa14.91□□□□□ -0.02
RORA-212ENST00000560004 TRMT2AQ8IZ69 625 aaKnown RBP14.91□□□□□ -0.02
RORA-212ENST00000560004 TSPYL4Q9UJ04 414 aa14.91□□□□□ -0.02
RORA-212ENST00000560004 NUP188Q5SRE5 1749 aa14.91□□□□□ -0.02
RORA-212ENST00000560004 LAS1LQ9Y4W2 734 aaKnown RBP14.9□□□□□ -0.02
RORA-212ENST00000560004 E9PSI1 815 aa14.89□□□□□ -0.03
RORA-212ENST00000560004 DUSP27Q5VZP5 1158 aa14.89□□□□□ -0.03
RORA-212ENST00000560004 SLC4A9Q96Q91 983 aa14.89□□□□□ -0.03
RORA-212ENST00000560004 EIF4A1P60842 406 aaKnown RBP14.88□□□□□ -0.03
RORA-212ENST00000560004 KRT24Q2M2I5 525 aa14.88□□□□□ -0.03
RORA-212ENST00000560004 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
RORA-212ENST00000560004 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
RORA-212ENST00000560004 C4BP0C0L5 1744 aa14.86□□□□□ -0.03
RORA-212ENST00000560004 TTC5Q8N0Z6 440 aa14.86□□□□□ -0.03
RORA-212ENST00000560004 SMARCC1Q92922 1105 aaPredicted RBP14.86□□□□□ -0.03
RORA-212ENST00000560004 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
RORA-212ENST00000560004 MYH14Q7Z406 1995 aaKnown RBP14.85□□□□□ -0.03
RORA-212ENST00000560004 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
RORA-212ENST00000560004 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
RORA-212ENST00000560004 APBA3O96018 575 aa14.85□□□□□ -0.03
RORA-212ENST00000560004 LOC102724428A0A0B4J2F2 783 aa14.84□□□□□ -0.03
RORA-212ENST00000560004 PLSCR1O15162 318 aa14.84□□□□□ -0.03
RORA-212ENST00000560004 SIK1P57059 783 aa14.84□□□□□ -0.03
RORA-212ENST00000560004 ITPK1Q13572 414 aa14.84□□□□□ -0.03
RORA-212ENST00000560004 TSPYL6Q8N831 410 aa14.84□□□□□ -0.03
RORA-212ENST00000560004 C8orf58Q8NAV2 365 aa14.84□□□□□ -0.03
RORA-212ENST00000560004 UPF1Q92900 1129 aaKnown RBP eCLIP14.84□□□□□ -0.03
RORA-212ENST00000560004 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
RORA-212ENST00000560004 GIGYF1O75420 1035 aaPredicted RBP14.83□□□□□ -0.04
RORA-212ENST00000560004 EXOSC9Q06265 439 aaKnown RBP14.83□□□□□ -0.04
RORA-212ENST00000560004 VSIG10Q8N0Z9 540 aa14.83□□□□□ -0.04
RORA-212ENST00000560004 PROM2Q8N271 834 aa14.83□□□□□ -0.04
RORA-212ENST00000560004 RBM42Q9BTD8 480 aaKnown RBP14.83□□□□□ -0.04
RORA-212ENST00000560004 LRRC4BQ9NT99 713 aa14.83□□□□□ -0.04
RORA-212ENST00000560004 UBR3Q6ZT12 1888 aa14.82□□□□□ -0.04
RORA-212ENST00000560004 KCNQ4P56696 695 aa14.82□□□□□ -0.04
RORA-212ENST00000560004 DEFB132Q7Z7B7 95 aa14.82□□□□□ -0.04
RORA-212ENST00000560004 CAMKK2Q96RR4 588 aa14.82□□□□□ -0.04
RORA-212ENST00000560004 EZH2Q15910 746 aaKnown RBP14.81□□□□□ -0.04
RORA-212ENST00000560004 DNAJC10Q8IXB1 793 aa14.81□□□□□ -0.04
RORA-212ENST00000560004 LINC00116Q8NCU8 138 aa14.81□□□□□ -0.04
RORA-212ENST00000560004 CCNL1Q9UK58 526 aaPredicted RBP14.81□□□□□ -0.04
RORA-212ENST00000560004 C4AP0C0L4 1744 aa14.8□□□□□ -0.04
RORA-212ENST00000560004 QSER1Q2KHR3 1735 aa14.8□□□□□ -0.04
RORA-212ENST00000560004 HOXB7P09629 217 aa14.8□□□□□ -0.04
RORA-212ENST00000560004 SNRPA1P09661 255 aaKnown RBP14.8□□□□□ -0.04
RORA-212ENST00000560004 EN1Q05925 392 aaPredicted RBP14.8□□□□□ -0.04
RORA-212ENST00000560004 TXNRD1Q16881 649 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms