RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 DNTTIP2Q5QJE6 756 aaKnown RBP26.52■■□□□ 1.84
PSMA4-215ENST00000559934 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
PSMA4-215ENST00000559934 RILPL2Q969X0 211 aa26.52■■□□□ 1.84
PSMA4-215ENST00000559934 STAG3Q9UJ98 1225 aa26.52■■□□□ 1.84
PSMA4-215ENST00000559934 INTS4Q96HW7 963 aaKnown RBP26.51■■□□□ 1.83
PSMA4-215ENST00000559934 MCCP23508 829 aa26.51■■□□□ 1.83
PSMA4-215ENST00000559934 C17orf53Q8N3J3 647 aaPredicted RBP26.51■■□□□ 1.83
PSMA4-215ENST00000559934 USP25Q9UHP3 1055 aa26.51■■□□□ 1.83
PSMA4-215ENST00000559934 SALL3Q9BXA9 1300 aa26.51■■□□□ 1.83
PSMA4-215ENST00000559934 TRIM6-TRIM34B2RNG4 842 aa26.5■■□□□ 1.83
PSMA4-215ENST00000559934 HAP1P54257 671 aaPredicted RBP26.5■■□□□ 1.83
PSMA4-215ENST00000559934 MTERF4Q7Z6M4 381 aaKnown RBP26.5■■□□□ 1.83
PSMA4-215ENST00000559934 PRDM10Q9NQV6 1147 aa26.5■■□□□ 1.83
PSMA4-215ENST00000559934 TUBGCP6Q96RT7 1819 aa26.5■■□□□ 1.83
PSMA4-215ENST00000559934 KIAA0232Q92628 1395 aa26.5■■□□□ 1.83
PSMA4-215ENST00000559934 CHMLP26374 656 aa26.5■■□□□ 1.83
PSMA4-215ENST00000559934 EIF4A2Q14240 407 aaKnown RBP26.5■■□□□ 1.83
PSMA4-215ENST00000559934 MX1P20591 662 aa26.48■■□□□ 1.83
PSMA4-215ENST00000559934 WASLO00401 505 aaPredicted RBP26.48■■□□□ 1.83
PSMA4-215ENST00000559934 UNC5CLQ8IV45 518 aa26.48■■□□□ 1.83
PSMA4-215ENST00000559934 MYRIPQ8NFW9 859 aa26.48■■□□□ 1.83
PSMA4-215ENST00000559934 TTC12Q9H892 705 aaPredicted RBP26.47■■□□□ 1.83
PSMA4-215ENST00000559934 IL25Q9H293 177 aa26.47■■□□□ 1.83
PSMA4-215ENST00000559934 PHF14O94880 888 aa26.46■■□□□ 1.83
PSMA4-215ENST00000559934 LRRCC1Q9C099 1032 aa26.46■■□□□ 1.83
PSMA4-215ENST00000559934 ANAPC15P60006 121 aa26.45■■□□□ 1.83
PSMA4-215ENST00000559934 PNMA6EA0A0J9YXQ4 647 aa26.45■■□□□ 1.82
PSMA4-215ENST00000559934 GNAI2P04899 355 aa26.45■■□□□ 1.82
PSMA4-215ENST00000559934 NUDT16Q96DE0 195 aaKnown RBP26.45■■□□□ 1.82
PSMA4-215ENST00000559934 SRCIN1Q9C0H9 1055 aa26.45■■□□□ 1.82
PSMA4-215ENST00000559934 DLC1Q96QB1 1528 aa26.44■■□□□ 1.82
PSMA4-215ENST00000559934 SMAP1Q8IYB5 467 aaPredicted RBP26.44■■□□□ 1.82
PSMA4-215ENST00000559934 PIBF1Q8WXW3 757 aa26.44■■□□□ 1.82
PSMA4-215ENST00000559934 RIMBP3CA6NJZ7 1639 aa26.44■■□□□ 1.82
PSMA4-215ENST00000559934 RIMBP3BA6NNM3 1639 aa26.44■■□□□ 1.82
PSMA4-215ENST00000559934 RIMBP3Q9UFD9 1639 aa26.44■■□□□ 1.82
PSMA4-215ENST00000559934 ADCY5O95622 1261 aa26.44■■□□□ 1.82
PSMA4-215ENST00000559934 NOLC1Q14978 699 aaKnown RBP eCLIP26.44■■□□□ 1.825e-12■□□□□ 8.7
PSMA4-215ENST00000559934 CNPY2Q9Y2B0 182 aa26.44■■□□□ 1.82
PSMA4-215ENST00000559934 WDR33Q9C0J8 1336 aaKnown RBP26.43■■□□□ 1.82
PSMA4-215ENST00000559934 HCLS1P14317 486 aaPredicted RBP26.43■■□□□ 1.82
PSMA4-215ENST00000559934 FAM177BA6PVY3 158 aa26.43■■□□□ 1.82
PSMA4-215ENST00000559934 CCT4P50991 539 aaKnown RBP26.43■■□□□ 1.82
PSMA4-215ENST00000559934 ZNF710Q8N1W2 664 aa26.43■■□□□ 1.82
PSMA4-215ENST00000559934 RPAP1Q9BWH6 1393 aaPredicted RBP26.42■■□□□ 1.82
PSMA4-215ENST00000559934 CRB1P82279 1406 aa26.42■■□□□ 1.82
PSMA4-215ENST00000559934 CCDC94Q9BW85 323 aaPredicted RBP26.42■■□□□ 1.82
PSMA4-215ENST00000559934 FOXO3O43524 673 aa26.41■■□□□ 1.82
PSMA4-215ENST00000559934 NRKQ7Z2Y5 1582 aa26.4■■□□□ 1.82
PSMA4-215ENST00000559934 UVSSAQ2YD98 709 aa26.4■■□□□ 1.82
PSMA4-215ENST00000559934 FAM184AQ8NB25 1140 aa26.4■■□□□ 1.82
PSMA4-215ENST00000559934 LARP6Q9BRS8 491 aaKnown RBP26.4■■□□□ 1.82
PSMA4-215ENST00000559934 MON2Q7Z3U7 1717 aa26.4■■□□□ 1.82
PSMA4-215ENST00000559934 CCDC183Q5T5S1 534 aa26.4■■□□□ 1.82
PSMA4-215ENST00000559934 TXNDC2Q86VQ3 553 aa26.39■■□□□ 1.82
PSMA4-215ENST00000559934 TSPYL4Q9UJ04 414 aa26.38■■□□□ 1.81
PSMA4-215ENST00000559934 SSH2Q76I76 1423 aa26.38■■□□□ 1.81
PSMA4-215ENST00000559934 SETD1AO15047 1707 aaKnown RBP26.38■■□□□ 1.81
PSMA4-215ENST00000559934 HSP90AB2PQ58FF8 381 aa26.38■■□□□ 1.81
PSMA4-215ENST00000559934 MAP4K4O95819 1239 aaPredicted RBP26.37■■□□□ 1.81
PSMA4-215ENST00000559934 PRIMPOLQ96LW4 560 aa26.37■■□□□ 1.81
PSMA4-215ENST00000559934 C3P01024 1663 aa26.37■■□□□ 1.81
PSMA4-215ENST00000559934 DTNBO60941 627 aa26.37■■□□□ 1.81
PSMA4-215ENST00000559934 CCDC61Q9Y6R9 512 aa26.37■■□□□ 1.81
PSMA4-215ENST00000559934 TMEM87AQ8NBN3 555 aa26.36■■□□□ 1.81
PSMA4-215ENST00000559934 IL17RAQ96F46 866 aa26.36■■□□□ 1.81
PSMA4-215ENST00000559934 IL1RAPL2Q9NP60 686 aa26.36■■□□□ 1.81
PSMA4-215ENST00000559934 NEO1Q92859 1461 aa26.35■■□□□ 1.81
PSMA4-215ENST00000559934 HSPA4P34932 840 aa26.35■■□□□ 1.81
PSMA4-215ENST00000559934 PLCB2Q00722 1185 aa26.35■■□□□ 1.81
PSMA4-215ENST00000559934 NECTIN2Q92692 538 aa26.35■■□□□ 1.81
PSMA4-215ENST00000559934 STAP2Q9UGK3 403 aa26.35■■□□□ 1.81
PSMA4-215ENST00000559934 SOX12O15370 315 aa26.35■■□□□ 1.81
PSMA4-215ENST00000559934 ATP8B2P98198 1209 aa26.34■■□□□ 1.81
PSMA4-215ENST00000559934 RICTORQ6R327 1708 aa26.34■■□□□ 1.81
PSMA4-215ENST00000559934 FIBPO43427 364 aa26.33■■□□□ 1.81
PSMA4-215ENST00000559934 ZSCAN22P10073 491 aaPredicted RBP26.33■■□□□ 1.81
PSMA4-215ENST00000559934 HMGN5P82970 282 aaKnown RBP26.33■■□□□ 1.81
PSMA4-215ENST00000559934 NUTM1Q86Y26 1132 aa26.33■■□□□ 1.81
PSMA4-215ENST00000559934 ZHX1Q9UKY1 873 aaPredicted RBP26.33■■□□□ 1.81
PSMA4-215ENST00000559934 LRRFIP2Q9Y608 721 aaKnown RBP26.33■■□□□ 1.81
PSMA4-215ENST00000559934 PLEKHG5O94827 1062 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 RIMS1Q86UR5 1692 aaKnown RBP26.32■■□□□ 1.8
PSMA4-215ENST00000559934 AP5Z1O43299 807 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 KDM4AO75164 1064 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 GTF2F1P35269 517 aaKnown RBP eCLIP26.32■■□□□ 1.8
PSMA4-215ENST00000559934 FKBP5Q13451 457 aaPredicted RBP26.32■■□□□ 1.8
PSMA4-215ENST00000559934 GIMAP6Q6P9H5 292 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 SPTLC3Q9NUV7 552 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 METP08581 1390 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 PRR36Q9H6K5 1346 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 AKAP12Q02952 1782 aa26.32■■□□□ 1.8
PSMA4-215ENST00000559934 ITSN1Q15811 1721 aa26.31■■□□□ 1.8
PSMA4-215ENST00000559934 SYT1P21579 422 aa26.3■■□□□ 1.8
PSMA4-215ENST00000559934 UBE2HP62256 183 aa26.3■■□□□ 1.8
PSMA4-215ENST00000559934 FLIIQ13045 1269 aa26.3■■□□□ 1.8
PSMA4-215ENST00000559934 MTHFSDQ2M296 383 aaKnown RBP26.3■■□□□ 1.8
PSMA4-215ENST00000559934 GNAI3P08754 354 aa26.3■■□□□ 1.8
PSMA4-215ENST00000559934 SNX14Q9Y5W7 946 aa26.3■■□□□ 1.8
PSMA4-215ENST00000559934 A2ML1A8K2U0 1454 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms