RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CCDC125Q86Z20 511 aa18.72■□□□□ 0.59
SMAD6-204ENST00000559931 PIGBQ92521 554 aa18.72■□□□□ 0.59
SMAD6-204ENST00000559931 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
SMAD6-204ENST00000559931 CEMIPQ8WUJ3 1361 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 BTBD11A6QL63 1104 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 WDR63Q8IWG1 891 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
SMAD6-204ENST00000559931 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 BCL9O00512 1426 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 TOGARAM1Q9Y4F4 1720 aa18.71■□□□□ 0.59
SMAD6-204ENST00000559931 APBA3O96018 575 aa18.69■□□□□ 0.58
SMAD6-204ENST00000559931 GNAI1P63096 354 aa18.68■□□□□ 0.58
SMAD6-204ENST00000559931 GOLGA2Q08379 1002 aa18.68■□□□□ 0.58
SMAD6-204ENST00000559931 SLC39A6Q13433 755 aa18.68■□□□□ 0.58
SMAD6-204ENST00000559931 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
SMAD6-204ENST00000559931 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
SMAD6-204ENST00000559931 ADAMTS7Q9UKP4 1686 aa18.68■□□□□ 0.58
SMAD6-204ENST00000559931 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
SMAD6-204ENST00000559931 BAG6P46379 1132 aa18.67■□□□□ 0.58
SMAD6-204ENST00000559931 CFAP44Q96MT7 982 aa18.67■□□□□ 0.58
SMAD6-204ENST00000559931 ASAP1Q9ULH1 1129 aa18.67■□□□□ 0.58
SMAD6-204ENST00000559931 EN1Q05925 392 aaPredicted RBP18.66■□□□□ 0.58
SMAD6-204ENST00000559931 SMARCC1Q92922 1105 aaPredicted RBP18.66■□□□□ 0.58
SMAD6-204ENST00000559931 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
SMAD6-204ENST00000559931 IL16Q14005 1332 aa18.66■□□□□ 0.58
SMAD6-204ENST00000559931 BTAF1O14981 1849 aa18.65■□□□□ 0.58
SMAD6-204ENST00000559931 ATG3Q9NT62 314 aa18.65■□□□□ 0.58
SMAD6-204ENST00000559931 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
SMAD6-204ENST00000559931 SIPA1L3O60292 1781 aaPredicted RBP18.64■□□□□ 0.57
SMAD6-204ENST00000559931 CHL1O00533 1208 aa18.64■□□□□ 0.57
SMAD6-204ENST00000559931 PTCD1O75127 700 aaKnown RBP18.64■□□□□ 0.57
SMAD6-204ENST00000559931 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
SMAD6-204ENST00000559931 RBM42Q9BTD8 480 aaKnown RBP18.64■□□□□ 0.57
SMAD6-204ENST00000559931 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.57
SMAD6-204ENST00000559931 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
SMAD6-204ENST00000559931 ZNF521Q96K83 1311 aa18.64■□□□□ 0.57
SMAD6-204ENST00000559931 MRC1P22897 1456 aa18.64■□□□□ 0.57
SMAD6-204ENST00000559931 KCNQ3O43525 872 aa18.63■□□□□ 0.57
SMAD6-204ENST00000559931 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
SMAD6-204ENST00000559931 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
SMAD6-204ENST00000559931 E9PSI1 815 aa18.62■□□□□ 0.57
SMAD6-204ENST00000559931 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
SMAD6-204ENST00000559931 EZH2Q15910 746 aaKnown RBP18.62■□□□□ 0.57
SMAD6-204ENST00000559931 TSR2Q969E8 191 aaKnown RBP18.62■□□□□ 0.57
SMAD6-204ENST00000559931 SPINK5Q9NQ38 1064 aaPredicted RBP18.61■□□□□ 0.57
SMAD6-204ENST00000559931 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
SMAD6-204ENST00000559931 SLFN5Q08AF3 891 aa18.6■□□□□ 0.57
SMAD6-204ENST00000559931 FMNL2Q96PY5 1086 aa18.6■□□□□ 0.57
SMAD6-204ENST00000559931 ZNF496Q96IT1 587 aaPredicted RBP18.59■□□□□ 0.57
SMAD6-204ENST00000559931 CAMKK2Q96RR4 588 aa18.59■□□□□ 0.57
SMAD6-204ENST00000559931 EIF4A1P60842 406 aaKnown RBP18.58■□□□□ 0.56
SMAD6-204ENST00000559931 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
SMAD6-204ENST00000559931 LOC102724428A0A0B4J2F2 783 aa18.57■□□□□ 0.56
SMAD6-204ENST00000559931 PLSCR1O15162 318 aa18.57■□□□□ 0.56
SMAD6-204ENST00000559931 ATP6V1AP38606 617 aa18.57■□□□□ 0.56
SMAD6-204ENST00000559931 SIK1P57059 783 aa18.57■□□□□ 0.56
SMAD6-204ENST00000559931 KDM3BQ7LBC6 1761 aa18.57■□□□□ 0.56
SMAD6-204ENST00000559931 ELL2O00472 640 aaPredicted RBP18.56■□□□□ 0.56
SMAD6-204ENST00000559931 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
SMAD6-204ENST00000559931 SNRPA1P09661 255 aaKnown RBP18.55■□□□□ 0.56
SMAD6-204ENST00000559931 KCNQ4P56696 695 aa18.55■□□□□ 0.56
SMAD6-204ENST00000559931 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
SMAD6-204ENST00000559931 RREB1Q92766 1687 aa18.54■□□□□ 0.56
SMAD6-204ENST00000559931 PAPPAQ13219 1627 aa18.54■□□□□ 0.56
SMAD6-204ENST00000559931 TXNRD1Q16881 649 aa18.54■□□□□ 0.56
SMAD6-204ENST00000559931 KRT24Q2M2I5 525 aa18.54■□□□□ 0.56
SMAD6-204ENST00000559931 RGPD3A6NKT7 1758 aaPredicted RBP18.54■□□□□ 0.56
SMAD6-204ENST00000559931 RGPD4Q7Z3J3 1758 aa18.54■□□□□ 0.56
SMAD6-204ENST00000559931 HEG1Q9ULI3 1381 aa18.54■□□□□ 0.56
SMAD6-204ENST00000559931 DUSP27Q5VZP5 1158 aa18.53■□□□□ 0.56
SMAD6-204ENST00000559931 PROM2Q8N271 834 aa18.53■□□□□ 0.56
SMAD6-204ENST00000559931 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
SMAD6-204ENST00000559931 TEX13AQ9BXU3 409 aaPredicted RBP18.53■□□□□ 0.56
SMAD6-204ENST00000559931 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
SMAD6-204ENST00000559931 GIGYF1O75420 1035 aaPredicted RBP18.52■□□□□ 0.56
SMAD6-204ENST00000559931 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
SMAD6-204ENST00000559931 SLC27A3Q5K4L6 730 aa18.52■□□□□ 0.56
SMAD6-204ENST00000559931 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.56
SMAD6-204ENST00000559931 TRMT2AQ8IZ69 625 aaKnown RBP18.52■□□□□ 0.56
SMAD6-204ENST00000559931 VSIG10Q8N0Z9 540 aa18.52■□□□□ 0.56
SMAD6-204ENST00000559931 KCPQ6ZWJ8 1503 aa18.52■□□□□ 0.56
SMAD6-204ENST00000559931 UBR2Q8IWV8 1755 aa18.52■□□□□ 0.55
SMAD6-204ENST00000559931 STARD3NLO95772 234 aa18.51■□□□□ 0.55
SMAD6-204ENST00000559931 TWISTNBQ3B726 338 aaPredicted RBP18.51■□□□□ 0.55
SMAD6-204ENST00000559931 SLC4A9Q96Q91 983 aa18.51■□□□□ 0.55
SMAD6-204ENST00000559931 LY75O60449 1722 aa18.5■□□□□ 0.55
SMAD6-204ENST00000559931 PRAMEF22A3QJZ6 481 aa18.5■□□□□ 0.55
SMAD6-204ENST00000559931 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
SMAD6-204ENST00000559931 ITPK1Q13572 414 aa18.5■□□□□ 0.55
SMAD6-204ENST00000559931 TSPYL6Q8N831 410 aa18.5■□□□□ 0.55
SMAD6-204ENST00000559931 NECTIN2Q92692 538 aa18.5■□□□□ 0.55
SMAD6-204ENST00000559931 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
SMAD6-204ENST00000559931 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
SMAD6-204ENST00000559931 LRRC4BQ9NT99 713 aa18.48■□□□□ 0.55
SMAD6-204ENST00000559931 HOXB7P09629 217 aa18.47■□□□□ 0.55
SMAD6-204ENST00000559931 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
SMAD6-204ENST00000559931 VAMP4O75379 141 aa18.46■□□□□ 0.55
SMAD6-204ENST00000559931 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms