RNA–Protein interactions for RNA: ENST00000559848.1

WDR61-209, Transcript of WD repeat domain 61, human

TSL 3

Gene WDR61, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR61-209	ENST00000559848	PALLD	Q8WX93	1383 aa		12.71	□□□□□ -0.37
WDR61-209	ENST00000559848	SLC39A6	Q13433	755 aa		12.71	□□□□□ -0.37
WDR61-209	ENST00000559848	NFE2L2	Q16236	605 aa		12.71	□□□□□ -0.37
WDR61-209	ENST00000559848	RTF1	Q92541	710 aa	Known RBP	12.71	□□□□□ -0.37
WDR61-209	ENST00000559848	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.71	□□□□□ -0.37
WDR61-209	ENST00000559848	ATG3	Q9NT62	314 aa		12.71	□□□□□ -0.37
WDR61-209	ENST00000559848	ITGB4	P16144	1822 aa		12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	PTCD1	O75127	700 aa	Known RBP	12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	TEF	Q10587	303 aa		12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	DIEXF	Q68CQ4	756 aa	Known RBP	12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	CNKSR2	Q8WXI2	1034 aa		12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	THUMPD2	Q9BTF0	503 aa	Known RBP	12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	PNN	Q9H307	717 aa	Known RBP	12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	SLC52A2	Q9HAB3	445 aa		12.7	□□□□□ -0.38
WDR61-209	ENST00000559848	NBPF14	Q5TI25	921 aa		12.69	□□□□□ -0.38
WDR61-209	ENST00000559848	FAM9B	Q8IZU0	186 aa		12.69	□□□□□ -0.38
WDR61-209	ENST00000559848	SMARCC1	Q92922	1105 aa	Predicted RBP	12.69	□□□□□ -0.38
WDR61-209	ENST00000559848	RIPK4	P57078	832 aa		12.68	□□□□□ -0.38
WDR61-209	ENST00000559848	ZNF827	Q17R98	1081 aa		12.68	□□□□□ -0.38
WDR61-209	ENST00000559848	RUNDC1	Q96C34	613 aa		12.68	□□□□□ -0.38
WDR61-209	ENST00000559848	STK32B	Q9NY57	414 aa		12.68	□□□□□ -0.38
WDR61-209	ENST00000559848	NUP188	Q5SRE5	1749 aa		12.68	□□□□□ -0.38
WDR61-209	ENST00000559848	RREB1	Q92766	1687 aa		12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	LOC102724428	A0A0B4J2F2	783 aa		12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	ATP6V1A	P38606	617 aa		12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	TMPO	P42166	694 aa	Known RBP	12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	SIK1	P57059	783 aa		12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	SMIM5	Q71RC9	77 aa		12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	PNISR	Q8TF01	805 aa	Known RBP	12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	MIS18A	Q9NYP9	233 aa		12.67	□□□□□ -0.38
WDR61-209	ENST00000559848	APAF1	O14727	1248 aa		12.66	□□□□□ -0.38
WDR61-209	ENST00000559848	KCNQ3	O43525	872 aa		12.66	□□□□□ -0.38
WDR61-209	ENST00000559848	ITPK1	Q13572	414 aa		12.66	□□□□□ -0.38
WDR61-209	ENST00000559848	SLC27A3	Q5K4L6	730 aa		12.66	□□□□□ -0.38
WDR61-209	ENST00000559848	SLC4A9	Q96Q91	983 aa		12.66	□□□□□ -0.38
WDR61-209	ENST00000559848	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.66	□□□□□ -0.38
WDR61-209	ENST00000559848	SCN11A	Q9UI33	1791 aa		12.66	□□□□□ -0.38
WDR61-209	ENST00000559848	BTBD11	A6QL63	1104 aa		12.65	□□□□□ -0.38
WDR61-209	ENST00000559848	SLC15A2	Q16348	729 aa		12.65	□□□□□ -0.38
WDR61-209	ENST00000559848	MIER1	Q8N108	512 aa		12.65	□□□□□ -0.38
WDR61-209	ENST00000559848	LINC00116	Q8NCU8	138 aa		12.65	□□□□□ -0.38
WDR61-209	ENST00000559848	SALL2	Q9Y467	1007 aa	Predicted RBP	12.65	□□□□□ -0.38
WDR61-209	ENST00000559848	TTC5	Q8N0Z6	440 aa		12.64	□□□□□ -0.39
WDR61-209	ENST00000559848	TFCP2L1	Q9NZI6	479 aa		12.64	□□□□□ -0.39
WDR61-209	ENST00000559848	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.64	□□□□□ -0.39
WDR61-209	ENST00000559848	RGPD4	Q7Z3J3	1758 aa		12.64	□□□□□ -0.39
WDR61-209	ENST00000559848	HTATSF1	O43719	755 aa	Known RBP	12.63	□□□□□ -0.39
WDR61-209	ENST00000559848	AKT1S1	Q96B36	256 aa		12.63	□□□□□ -0.39
WDR61-209	ENST00000559848	LAS1L	Q9Y4W2	734 aa	Known RBP	12.63	□□□□□ -0.39
WDR61-209	ENST00000559848	CEMIP	Q8WUJ3	1361 aa		12.63	□□□□□ -0.39
WDR61-209	ENST00000559848	MRC1	P22897	1456 aa		12.63	□□□□□ -0.39
WDR61-209	ENST00000559848	LY75	O60449	1722 aa		12.62	□□□□□ -0.39
WDR61-209	ENST00000559848	PHF14	O94880	888 aa		12.62	□□□□□ -0.39
WDR61-209	ENST00000559848	DNAJC10	Q8IXB1	793 aa		12.62	□□□□□ -0.39
WDR61-209	ENST00000559848	AK7	Q96M32	723 aa		12.62	□□□□□ -0.39
WDR61-209	ENST00000559848	TRIM35	Q9UPQ4	493 aa		12.62	□□□□□ -0.39
WDR61-209	ENST00000559848	VIRMA	Q69YN4	1812 aa	Known RBP	12.62	□□□□□ -0.39
WDR61-209	ENST00000559848	ADAMTS7	Q9UKP4	1686 aa		12.61	□□□□□ -0.39
WDR61-209	ENST00000559848	ZBTB7A	O95365	584 aa		12.61	□□□□□ -0.39
WDR61-209	ENST00000559848	TAF7	Q15545	349 aa	Predicted RBP	12.61	□□□□□ -0.39
WDR61-209	ENST00000559848	ZNF790	Q6PG37	636 aa		12.61	□□□□□ -0.39
WDR61-209	ENST00000559848	AMIGO3	Q86WK7	504 aa		12.61	□□□□□ -0.39
WDR61-209	ENST00000559848	ZNF496	Q96IT1	587 aa	Predicted RBP	12.61	□□□□□ -0.39
WDR61-209	ENST00000559848	DLG5	Q8TDM6	1919 aa		12.6	□□□□□ -0.39
WDR61-209	ENST00000559848	GNPAT	O15228	680 aa		12.6	□□□□□ -0.39
WDR61-209	ENST00000559848	LMOD3	Q0VAK6	560 aa		12.6	□□□□□ -0.39
WDR61-209	ENST00000559848	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.6	□□□□□ -0.39
WDR61-209	ENST00000559848	PAPPA	Q13219	1627 aa		12.59	□□□□□ -0.39
WDR61-209	ENST00000559848	PRAMEF22	A3QJZ6	481 aa		12.59	□□□□□ -0.39
WDR61-209	ENST00000559848	TSPYL4	Q9UJ04	414 aa		12.59	□□□□□ -0.39
WDR61-209	ENST00000559848	SRCAP	Q6ZRS2	3230 aa		12.59	□□□□□ -0.39
WDR61-209	ENST00000559848	PNPLA7	Q6ZV29	1317 aa		12.59	□□□□□ -0.39
WDR61-209	ENST00000559848	KCP	Q6ZWJ8	1503 aa		12.58	□□□□□ -0.4
WDR61-209	ENST00000559848	C5	P01031	1676 aa		12.58	□□□□□ -0.4
WDR61-209	ENST00000559848	CRKL	P46109	303 aa	Known RBP	12.58	□□□□□ -0.4
WDR61-209	ENST00000559848	FMNL2	Q96PY5	1086 aa		12.58	□□□□□ -0.4
WDR61-209	ENST00000559848	SIPA1L3	O60292	1781 aa	Predicted RBP	12.57	□□□□□ -0.4
WDR61-209	ENST00000559848	CCER2	I3L3R5	266 aa		12.57	□□□□□ -0.4
WDR61-209	ENST00000559848	PIP4K2A	P48426	406 aa	Predicted RBP	12.57	□□□□□ -0.4
WDR61-209	ENST00000559848	MSL1	Q68DK7	614 aa		12.57	□□□□□ -0.4
WDR61-209	ENST00000559848	COL23A1	Q86Y22	540 aa	Predicted RBP	12.57	□□□□□ -0.4
WDR61-209	ENST00000559848	C4B	P0C0L5	1744 aa		12.57	□□□□□ -0.4
WDR61-209	ENST00000559848	HEG1	Q9ULI3	1381 aa		12.56	□□□□□ -0.4
WDR61-209	ENST00000559848	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.56	□□□□□ -0.4
WDR61-209	ENST00000559848	CANX	P27824	592 aa	Known RBP	12.56	□□□□□ -0.4
WDR61-209	ENST00000559848	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.56	□□□□□ -0.4
WDR61-209	ENST00000559848	A1BG	P04217	495 aa		12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	CYP19A1	P11511	503 aa	Predicted RBP	12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	KRT24	Q2M2I5	525 aa		12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	INTS5	Q6P9B9	1019 aa	Known RBP	12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	CCDC87	Q9NVE4	849 aa		12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	ZBTB1	Q9Y2K1	713 aa		12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	RTCB	Q9Y3I0	505 aa	Known RBP	12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	USP16	Q9Y5T5	823 aa		12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	TAF1L	Q8IZX4	1826 aa		12.55	□□□□□ -0.4
WDR61-209	ENST00000559848	TJP1	Q07157	1748 aa		12.54	□□□□□ -0.4
WDR61-209	ENST00000559848	EIF4A1	P60842	406 aa	Known RBP	12.54	□□□□□ -0.4
WDR61-209	ENST00000559848	VSIG10	Q8N0Z9	540 aa		12.54	□□□□□ -0.4
WDR61-209	ENST00000559848	NECTIN2	Q92692	538 aa		12.54	□□□□□ -0.4
WDR61-209	ENST00000559848	ARX	Q96QS3	562 aa		12.54	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms