RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
HMG20A-209ENST00000559728 DCAF5Q96JK2 942 aa12□□□□□ -0.49
HMG20A-209ENST00000559728 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
HMG20A-209ENST00000559728 CEMIPQ8WUJ3 1361 aa12□□□□□ -0.49
HMG20A-209ENST00000559728 MAP3K5Q99683 1374 aa12□□□□□ -0.49
HMG20A-209ENST00000559728 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
HMG20A-209ENST00000559728 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
HMG20A-209ENST00000559728 PIGBQ92521 554 aa11.99□□□□□ -0.49
HMG20A-209ENST00000559728 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
HMG20A-209ENST00000559728 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
HMG20A-209ENST00000559728 MRC1P22897 1456 aa11.98□□□□□ -0.49
HMG20A-209ENST00000559728 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
HMG20A-209ENST00000559728 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
HMG20A-209ENST00000559728 APAF1O14727 1248 aa11.98□□□□□ -0.49
HMG20A-209ENST00000559728 DCTN1Q14203 1278 aa11.98□□□□□ -0.49
HMG20A-209ENST00000559728 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
HMG20A-209ENST00000559728 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
HMG20A-209ENST00000559728 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
HMG20A-209ENST00000559728 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
HMG20A-209ENST00000559728 HSP90AB1P08238 724 aaKnown RBP11.97□□□□□ -0.49
HMG20A-209ENST00000559728 MCM10Q7L590 875 aa11.97□□□□□ -0.49
HMG20A-209ENST00000559728 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
HMG20A-209ENST00000559728 HTATSF1O43719 755 aaKnown RBP11.96□□□□□ -0.49
HMG20A-209ENST00000559728 RIPK4P57078 832 aa11.96□□□□□ -0.49
HMG20A-209ENST00000559728 DEFB132Q7Z7B7 95 aa11.96□□□□□ -0.49
HMG20A-209ENST00000559728 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
HMG20A-209ENST00000559728 THUMPD2Q9BTF0 503 aaKnown RBP11.96□□□□□ -0.49
HMG20A-209ENST00000559728 SLC52A2Q9HAB3 445 aa11.96□□□□□ -0.49
HMG20A-209ENST00000559728 NHSQ6T4R5 1651 aa11.96□□□□□ -0.5
HMG20A-209ENST00000559728 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
HMG20A-209ENST00000559728 TNS1Q9HBL0 1735 aaKnown RBP11.95□□□□□ -0.5
HMG20A-209ENST00000559728 CCDC125Q86Z20 511 aa11.95□□□□□ -0.5
HMG20A-209ENST00000559728 CAMKK2Q96RR4 588 aa11.95□□□□□ -0.5
HMG20A-209ENST00000559728 ATG3Q9NT62 314 aa11.95□□□□□ -0.5
HMG20A-209ENST00000559728 PLSCR1O15162 318 aa11.94□□□□□ -0.5
HMG20A-209ENST00000559728 APBA3O96018 575 aa11.94□□□□□ -0.5
HMG20A-209ENST00000559728 SYTL4Q96C24 671 aaPredicted RBP11.94□□□□□ -0.5
HMG20A-209ENST00000559728 ASAP1Q9ULH1 1129 aa11.94□□□□□ -0.5
HMG20A-209ENST00000559728 SBF2Q86WG5 1849 aa11.94□□□□□ -0.5
HMG20A-209ENST00000559728 EN1Q05925 392 aaPredicted RBP11.93□□□□□ -0.5
HMG20A-209ENST00000559728 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
HMG20A-209ENST00000559728 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
HMG20A-209ENST00000559728 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
HMG20A-209ENST00000559728 KCNQ3O43525 872 aa11.92□□□□□ -0.5
HMG20A-209ENST00000559728 CABP4P57796 275 aa11.92□□□□□ -0.5
HMG20A-209ENST00000559728 EZH2Q15910 746 aaKnown RBP11.92□□□□□ -0.5
HMG20A-209ENST00000559728 CCDC27Q2M243 656 aa11.92□□□□□ -0.5
HMG20A-209ENST00000559728 LRRC4BQ9NT99 713 aa11.92□□□□□ -0.5
HMG20A-209ENST00000559728 TMOD3Q9NYL9 352 aa11.92□□□□□ -0.5
HMG20A-209ENST00000559728 ZNF521Q96K83 1311 aa11.91□□□□□ -0.5
HMG20A-209ENST00000559728 NEFMP07197 916 aa11.91□□□□□ -0.5
HMG20A-209ENST00000559728 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
HMG20A-209ENST00000559728 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
HMG20A-209ENST00000559728 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
HMG20A-209ENST00000559728 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.5
HMG20A-209ENST00000559728 ZNF853P0CG23 659 aa11.9□□□□□ -0.5
HMG20A-209ENST00000559728 WWC1Q8IX03 1113 aa11.9□□□□□ -0.5
HMG20A-209ENST00000559728 BTAF1O14981 1849 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 BAG6P46379 1132 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 KCNQ4P56696 695 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 TEFQ10587 303 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 KCPQ6ZWJ8 1503 aa11.89□□□□□ -0.51
HMG20A-209ENST00000559728 CHL1O00533 1208 aa11.88□□□□□ -0.51
HMG20A-209ENST00000559728 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
HMG20A-209ENST00000559728 ITPK1Q13572 414 aa11.88□□□□□ -0.51
HMG20A-209ENST00000559728 TAF7Q15545 349 aaPredicted RBP11.88□□□□□ -0.51
HMG20A-209ENST00000559728 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
HMG20A-209ENST00000559728 PAPPAQ13219 1627 aa11.88□□□□□ -0.51
HMG20A-209ENST00000559728 HEG1Q9ULI3 1381 aa11.88□□□□□ -0.51
HMG20A-209ENST00000559728 ITGB4P16144 1822 aa11.88□□□□□ -0.51
HMG20A-209ENST00000559728 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
HMG20A-209ENST00000559728 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
HMG20A-209ENST00000559728 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
HMG20A-209ENST00000559728 SIK1P57059 783 aa11.87□□□□□ -0.51
HMG20A-209ENST00000559728 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
HMG20A-209ENST00000559728 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
HMG20A-209ENST00000559728 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
HMG20A-209ENST00000559728 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
HMG20A-209ENST00000559728 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
HMG20A-209ENST00000559728 DLG5Q8TDM6 1919 aa11.87□□□□□ -0.51
HMG20A-209ENST00000559728 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
HMG20A-209ENST00000559728 RGPD3A6NKT7 1758 aaPredicted RBP11.85□□□□□ -0.51
HMG20A-209ENST00000559728 RGPD4Q7Z3J3 1758 aa11.85□□□□□ -0.51
HMG20A-209ENST00000559728 PRAMEF22A3QJZ6 481 aa11.85□□□□□ -0.51
HMG20A-209ENST00000559728 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
HMG20A-209ENST00000559728 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
HMG20A-209ENST00000559728 SLC27A3Q5K4L6 730 aa11.85□□□□□ -0.51
HMG20A-209ENST00000559728 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
HMG20A-209ENST00000559728 LINC00116Q8NCU8 138 aa11.85□□□□□ -0.51
HMG20A-209ENST00000559728 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
HMG20A-209ENST00000559728 BABAM1Q9NWV8 329 aa11.85□□□□□ -0.51
HMG20A-209ENST00000559728 LY75O60449 1722 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 KRT24Q2M2I5 525 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 WDR63Q8IWG1 891 aa11.84□□□□□ -0.51
HMG20A-209ENST00000559728 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms