RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 MCM10Q7L590 875 aa7.84□□□□□ -1.15
SHC4-206ENST00000559289 PTF1AQ7RTS3 328 aa7.84□□□□□ -1.15
SHC4-206ENST00000559289 THUMPD2Q9BTF0 503 aaKnown RBP7.84□□□□□ -1.15
SHC4-206ENST00000559289 BTAF1O14981 1849 aa7.84□□□□□ -1.15
SHC4-206ENST00000559289 ZNF521Q96K83 1311 aa7.83□□□□□ -1.16
SHC4-206ENST00000559289 GNAT3A8MTJ3 354 aa7.83□□□□□ -1.16
SHC4-206ENST00000559289 KCNQ2O43526 872 aa7.83□□□□□ -1.16
SHC4-206ENST00000559289 HTATSF1O43719 755 aaKnown RBP7.83□□□□□ -1.16
SHC4-206ENST00000559289 NEUROD2Q15784 382 aa7.83□□□□□ -1.16
SHC4-206ENST00000559289 C1orf141Q5JVX7 400 aa7.83□□□□□ -1.16
SHC4-206ENST00000559289 DCAF5Q96JK2 942 aa7.83□□□□□ -1.16
SHC4-206ENST00000559289 PLSCR2Q9NRY7 297 aa7.83□□□□□ -1.16
SHC4-206ENST00000559289 KDM3BQ7LBC6 1761 aa7.82□□□□□ -1.16
SHC4-206ENST00000559289 UBR2Q8IWV8 1755 aa7.82□□□□□ -1.16
SHC4-206ENST00000559289 KAT6BQ8WYB5 2073 aa7.82□□□□□ -1.16
SHC4-206ENST00000559289 NEFMP07197 916 aa7.82□□□□□ -1.16
SHC4-206ENST00000559289 HSP90AB1P08238 724 aaKnown RBP7.82□□□□□ -1.16
SHC4-206ENST00000559289 CCDC27Q2M243 656 aa7.82□□□□□ -1.16
SHC4-206ENST00000559289 FAM196AQ6ZSG2 479 aa7.82□□□□□ -1.16
SHC4-206ENST00000559289 ACSBG1Q96GR2 724 aa7.82□□□□□ -1.16
SHC4-206ENST00000559289 LY75O60449 1722 aa7.81□□□□□ -1.16
SHC4-206ENST00000559289 ERVV-2B6SEH9 535 aa7.81□□□□□ -1.16
SHC4-206ENST00000559289 PRIM1P49642 420 aaKnown RBP7.81□□□□□ -1.16
SHC4-206ENST00000559289 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
SHC4-206ENST00000559289 PIGBQ92521 554 aa7.81□□□□□ -1.16
SHC4-206ENST00000559289 SALL2Q9Y467 1007 aaPredicted RBP7.81□□□□□ -1.16
SHC4-206ENST00000559289 ZNF853P0CG23 659 aa7.8□□□□□ -1.16
SHC4-206ENST00000559289 NFATC2IPQ8NCF5 419 aa7.8□□□□□ -1.16
SHC4-206ENST00000559289 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
SHC4-206ENST00000559289 SLC52A2Q9HAB3 445 aa7.8□□□□□ -1.16
SHC4-206ENST00000559289 RGPD3A6NKT7 1758 aaPredicted RBP7.79□□□□□ -1.16
SHC4-206ENST00000559289 RGPD4Q7Z3J3 1758 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 KCPQ6ZWJ8 1503 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 CICQ96RK0 1608 aaPredicted RBP7.79□□□□□ -1.16
SHC4-206ENST00000559289 KCNQ3O43525 872 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 TRIM37O94972 964 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 HNRNPUQ00839 825 aaKnown RBP eCLIP7.79□□□□□ -1.16
SHC4-206ENST00000559289 LMOD3Q0VAK6 560 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 NGEFQ8N5V2 710 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 BCL11BQ9C0K0 894 aaPredicted RBP7.79□□□□□ -1.16
SHC4-206ENST00000559289 ASAP1Q9ULH1 1129 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 C5P01031 1676 aa7.79□□□□□ -1.16
SHC4-206ENST00000559289 TJP1Q07157 1748 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 CABP4P57796 275 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 TEFQ10587 303 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 SLC39A6Q13433 755 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 TAF7Q15545 349 aaPredicted RBP7.78□□□□□ -1.16
SHC4-206ENST00000559289 SYTL4Q96C24 671 aaPredicted RBP7.78□□□□□ -1.16
SHC4-206ENST00000559289 ATG3Q9NT62 314 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 TMOD3Q9NYL9 352 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 MIS18AQ9NYP9 233 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 ZNF831Q5JPB2 1677 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 RREB1Q92766 1687 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 TAF1LQ8IZX4 1826 aa7.78□□□□□ -1.16
SHC4-206ENST00000559289 CHL1O00533 1208 aa7.77□□□□□ -1.17
SHC4-206ENST00000559289 WDR63Q8IWG1 891 aa7.77□□□□□ -1.17
SHC4-206ENST00000559289 CFAP44Q96MT7 982 aa7.77□□□□□ -1.17
SHC4-206ENST00000559289 SLC4A9Q96Q91 983 aa7.77□□□□□ -1.17
SHC4-206ENST00000559289 COL5A3P25940 1745 aaPredicted RBP7.77□□□□□ -1.17
SHC4-206ENST00000559289 IL16Q14005 1332 aa7.77□□□□□ -1.17
SHC4-206ENST00000559289 ZBED9Q6R2W3 1325 aa7.77□□□□□ -1.17
SHC4-206ENST00000559289 HEG1Q9ULI3 1381 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 BTBD11A6QL63 1104 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 ZNF790Q6PG37 636 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 TRMT2AQ8IZ69 625 aaKnown RBP7.76□□□□□ -1.17
SHC4-206ENST00000559289 PROM2Q8N271 834 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 UPF1Q92900 1129 aaKnown RBP eCLIP7.76□□□□□ -1.17
SHC4-206ENST00000559289 TSR2Q969E8 191 aaKnown RBP7.76□□□□□ -1.17
SHC4-206ENST00000559289 CDCA7LQ96GN5 454 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 MBIPQ9NS73 344 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 IFT57Q9NWB7 429 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 LAMB4A4D0S4 1761 aa7.76□□□□□ -1.17
SHC4-206ENST00000559289 NUP188Q5SRE5 1749 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 PALLDQ8WX93 1383 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 PLSCR1O15162 318 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 EIF4A1P60842 406 aaKnown RBP7.75□□□□□ -1.17
SHC4-206ENST00000559289 SLFN5Q08AF3 891 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 KRT24Q2M2I5 525 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 ZNF496Q96IT1 587 aaPredicted RBP7.75□□□□□ -1.17
SHC4-206ENST00000559289 BABAM1Q9NWV8 329 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 TSPYL4Q9UJ04 414 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 LAS1LQ9Y4W2 734 aaKnown RBP7.75□□□□□ -1.17
SHC4-206ENST00000559289 FANCIQ9NVI1 1328 aa7.75□□□□□ -1.17
SHC4-206ENST00000559289 MYH14Q7Z406 1995 aaKnown RBP7.74□□□□□ -1.17
SHC4-206ENST00000559289 PRAMEF22A3QJZ6 481 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 APBA3O96018 575 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 KCNQ4P56696 695 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 GNAI1P63096 354 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 CALD1Q05682 793 aaKnown RBP7.74□□□□□ -1.17
SHC4-206ENST00000559289 GOLGA2Q08379 1002 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 DUSP27Q5VZP5 1158 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 DEFB132Q7Z7B7 95 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 YTHDC1Q96MU7 727 aaKnown RBP7.74□□□□□ -1.17
SHC4-206ENST00000559289 CAMKK2Q96RR4 588 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 LRRC4BQ9NT99 713 aa7.74□□□□□ -1.17
SHC4-206ENST00000559289 TUBGCP6Q96RT7 1819 aa7.73□□□□□ -1.17
SHC4-206ENST00000559289 LOC102724428A0A0B4J2F2 783 aa7.73□□□□□ -1.17
SHC4-206ENST00000559289 E9PSI1 815 aa7.73□□□□□ -1.17
SHC4-206ENST00000559289 PTCD1O75127 700 aaKnown RBP7.73□□□□□ -1.17
SHC4-206ENST00000559289 SIK1P57059 783 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms