RNA–Protein interactions for RNA: ENST00000559274.1

MARK3-218, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-218ENST00000559274 NEFMP07197 916 aa12.48□□□□□ -0.41
MARK3-218ENST00000559274 CABP4P57796 275 aa12.48□□□□□ -0.41
MARK3-218ENST00000559274 CC2D1BQ5T0F9 858 aaKnown RBP12.48□□□□□ -0.41
MARK3-218ENST00000559274 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
MARK3-218ENST00000559274 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
MARK3-218ENST00000559274 AK7Q96M32 723 aa12.48□□□□□ -0.41
MARK3-218ENST00000559274 BTAF1O14981 1849 aa12.47□□□□□ -0.41
MARK3-218ENST00000559274 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
MARK3-218ENST00000559274 ARXQ96QS3 562 aa12.47□□□□□ -0.41
MARK3-218ENST00000559274 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
MARK3-218ENST00000559274 IL13P35225 146 aa12.46□□□□□ -0.41
MARK3-218ENST00000559274 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
MARK3-218ENST00000559274 PIGBQ92521 554 aa12.46□□□□□ -0.41
MARK3-218ENST00000559274 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.41
MARK3-218ENST00000559274 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
MARK3-218ENST00000559274 SIK1P57059 783 aa12.45□□□□□ -0.42
MARK3-218ENST00000559274 KDRP35968 1356 aa12.44□□□□□ -0.42
MARK3-218ENST00000559274 SSFA2P28290 1259 aa12.44□□□□□ -0.42
MARK3-218ENST00000559274 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
MARK3-218ENST00000559274 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
MARK3-218ENST00000559274 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
MARK3-218ENST00000559274 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
MARK3-218ENST00000559274 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
MARK3-218ENST00000559274 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
MARK3-218ENST00000559274 DOT1LQ8TEK3 1739 aa12.42□□□□□ -0.42
MARK3-218ENST00000559274 HAX1O00165 279 aa12.42□□□□□ -0.42
MARK3-218ENST00000559274 U2SURPO15042 1029 aaKnown RBP12.42□□□□□ -0.42
MARK3-218ENST00000559274 PTGER2P43116 358 aa12.42□□□□□ -0.42
MARK3-218ENST00000559274 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
MARK3-218ENST00000559274 PNPLA7Q6ZV29 1317 aa12.41□□□□□ -0.42
MARK3-218ENST00000559274 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
MARK3-218ENST00000559274 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
MARK3-218ENST00000559274 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
MARK3-218ENST00000559274 RTCBQ9Y3I0 505 aaKnown RBP12.41□□□□□ -0.42
MARK3-218ENST00000559274 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
MARK3-218ENST00000559274 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
MARK3-218ENST00000559274 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
MARK3-218ENST00000559274 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
MARK3-218ENST00000559274 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
MARK3-218ENST00000559274 RTF1Q92541 710 aaKnown RBP12.39□□□□□ -0.43
MARK3-218ENST00000559274 TEX13AQ9BXU3 409 aaPredicted RBP12.39□□□□□ -0.43
MARK3-218ENST00000559274 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
MARK3-218ENST00000559274 ATG3Q9NT62 314 aa12.39□□□□□ -0.43
MARK3-218ENST00000559274 ASAP1Q9ULH1 1129 aa12.39□□□□□ -0.43
MARK3-218ENST00000559274 LY75O60449 1722 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 GNPATO15228 680 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 GRIN3BO60391 1043 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 FCHSD2O94868 740 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 HMOX1P09601 288 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 TEFQ10587 303 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
MARK3-218ENST00000559274 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
MARK3-218ENST00000559274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
MARK3-218ENST00000559274 RFC4P35249 363 aa12.37□□□□□ -0.43
MARK3-218ENST00000559274 KCNQ4P56696 695 aa12.37□□□□□ -0.43
MARK3-218ENST00000559274 CNGB1Q14028 1251 aaPredicted RBP12.37□□□□□ -0.43
MARK3-218ENST00000559274 RALBP1Q15311 655 aa12.37□□□□□ -0.43
MARK3-218ENST00000559274 GPR162Q16538 588 aa12.37□□□□□ -0.43
MARK3-218ENST00000559274 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
MARK3-218ENST00000559274 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
MARK3-218ENST00000559274 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
MARK3-218ENST00000559274 PDGFDQ9GZP0 370 aaPredicted RBP12.37□□□□□ -0.43
MARK3-218ENST00000559274 QSER1Q2KHR3 1735 aa12.37□□□□□ -0.43
MARK3-218ENST00000559274 STARD3NLO95772 234 aa12.36□□□□□ -0.43
MARK3-218ENST00000559274 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
MARK3-218ENST00000559274 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
MARK3-218ENST00000559274 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
MARK3-218ENST00000559274 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
MARK3-218ENST00000559274 RNMTO43148 476 aaKnown RBP12.35□□□□□ -0.43
MARK3-218ENST00000559274 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
MARK3-218ENST00000559274 PHF14O94880 888 aa12.35□□□□□ -0.43
MARK3-218ENST00000559274 YY1P25490 414 aa12.35□□□□□ -0.43
MARK3-218ENST00000559274 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
MARK3-218ENST00000559274 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
MARK3-218ENST00000559274 PPP2R1AP30153 589 aa12.34□□□□□ -0.43
MARK3-218ENST00000559274 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
MARK3-218ENST00000559274 ITGB4P16144 1822 aa12.33□□□□□ -0.44
MARK3-218ENST00000559274 A0A087WZG4 1122 aa12.33□□□□□ -0.44
MARK3-218ENST00000559274 ZPR1O75312 459 aa12.33□□□□□ -0.44
MARK3-218ENST00000559274 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
MARK3-218ENST00000559274 C5P01031 1676 aa12.32□□□□□ -0.44
MARK3-218ENST00000559274 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
MARK3-218ENST00000559274 PARP3Q9Y6F1 533 aa12.32□□□□□ -0.44
MARK3-218ENST00000559274 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
MARK3-218ENST00000559274 PRKAR2BP31323 418 aa12.31□□□□□ -0.44
MARK3-218ENST00000559274 ITPK1Q13572 414 aa12.31□□□□□ -0.44
MARK3-218ENST00000559274 PNISRQ8TF01 805 aaKnown RBP12.31□□□□□ -0.44
MARK3-218ENST00000559274 CCDC87Q9NVE4 849 aa12.31□□□□□ -0.44
MARK3-218ENST00000559274 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
MARK3-218ENST00000559274 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
MARK3-218ENST00000559274 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
MARK3-218ENST00000559274 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
MARK3-218ENST00000559274 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms