RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	BTBD11	A6QL63	1104 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	FLII	Q13045	1269 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	KRT24	Q2M2I5	525 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	CHD1L	Q86WJ1	897 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	ANKRD44	Q8N8A2	993 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	NLRP2	Q9NX02	1062 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	HDAC5	Q9UQL6	1122 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	NOP58	Q9Y2X3	529 aa	Known RBP	13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	ALS2	Q96Q42	1657 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	LTN1	O94822	1766 aa		13.43	□□□□□ -0.26
LRRC49-215	ENST00000559201	LRRC37A3	O60309	1634 aa		13.42	□□□□□ -0.26
LRRC49-215	ENST00000559201	CSB-PGBD3	P0DP91	1061 aa		13.42	□□□□□ -0.26
LRRC49-215	ENST00000559201	HDGFL1	Q5TGJ6	251 aa		13.42	□□□□□ -0.26
LRRC49-215	ENST00000559201	DCTPP1	Q9H773	170 aa		13.42	□□□□□ -0.26
LRRC49-215	ENST00000559201	SKAP1	Q86WV1	359 aa		13.41	□□□□□ -0.26
LRRC49-215	ENST00000559201	IFNL2	Q8IZJ0	200 aa		13.41	□□□□□ -0.26
LRRC49-215	ENST00000559201	LGR6	Q9HBX8	967 aa		13.41	□□□□□ -0.26
LRRC49-215	ENST00000559201	MED1	Q15648	1581 aa	Predicted RBP	13.41	□□□□□ -0.26
LRRC49-215	ENST00000559201	RGS12	O14924	1447 aa		13.4	□□□□□ -0.26
LRRC49-215	ENST00000559201	GNAI2	P04899	355 aa		13.4	□□□□□ -0.26
LRRC49-215	ENST00000559201	MYT1	Q01538	1121 aa		13.4	□□□□□ -0.26
LRRC49-215	ENST00000559201	FKBP5	Q13451	457 aa	Predicted RBP	13.4	□□□□□ -0.26
LRRC49-215	ENST00000559201	ANKRD45	Q5TZF3	282 aa		13.4	□□□□□ -0.26
LRRC49-215	ENST00000559201	MPRIP	Q6WCQ1	1025 aa		13.4	□□□□□ -0.26
LRRC49-215	ENST00000559201	ANP32E	Q9BTT0	268 aa		13.4	□□□□□ -0.26
LRRC49-215	ENST00000559201	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.39	□□□□□ -0.27
LRRC49-215	ENST00000559201	NPM2	Q86SE8	214 aa	Known RBP	13.39	□□□□□ -0.27
LRRC49-215	ENST00000559201	DBF4	Q9UBU7	674 aa	Predicted RBP	13.39	□□□□□ -0.27
LRRC49-215	ENST00000559201	DAXX	Q9UER7	740 aa	Predicted RBP	13.39	□□□□□ -0.27
LRRC49-215	ENST00000559201	CAMTA1	Q9Y6Y1	1673 aa		13.39	□□□□□ -0.27
LRRC49-215	ENST00000559201	STRCP1	A6NGW2	1772 aa		13.39	□□□□□ -0.27
LRRC49-215	ENST00000559201	PXDNL	A1KZ92	1463 aa		13.38	□□□□□ -0.27
LRRC49-215	ENST00000559201	PHKG2	P15735	406 aa		13.38	□□□□□ -0.27
LRRC49-215	ENST00000559201	CERK	Q8TCT0	537 aa		13.38	□□□□□ -0.27
LRRC49-215	ENST00000559201	DCAF5	Q96JK2	942 aa		13.38	□□□□□ -0.27
LRRC49-215	ENST00000559201	HEG1	Q9ULI3	1381 aa		13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	BMP2KL	Q5H9B9	411 aa		13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	CEP85	Q6P2H3	762 aa		13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	G2E3	Q7L622	706 aa		13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	SIRT2	Q8IXJ6	389 aa		13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	DDX17	Q92841	729 aa	Known RBP	13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	PRDM11	Q9NQV5	511 aa		13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	HYPK	Q9NX55	129 aa		13.37	□□□□□ -0.27
LRRC49-215	ENST00000559201	PLEKHG5	O94827	1062 aa		13.36	□□□□□ -0.27
LRRC49-215	ENST00000559201	SLC4A10	Q6U841	1118 aa		13.36	□□□□□ -0.27
LRRC49-215	ENST00000559201	SLC52A2	Q9HAB3	445 aa		13.36	□□□□□ -0.27
LRRC49-215	ENST00000559201	LMO7	Q8WWI1	1683 aa		13.36	□□□□□ -0.27
LRRC49-215	ENST00000559201	WDR17	Q8IZU2	1322 aa		13.36	□□□□□ -0.27
LRRC49-215	ENST00000559201	STRC	Q7RTU9	1775 aa		13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	GIGYF1	O75420	1035 aa	Predicted RBP	13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	DDX58	O95786	925 aa	Known RBP	13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	CABLES1	Q8TDN4	633 aa		13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	CARD10	Q9BWT7	1032 aa		13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	LNPK	Q9C0E8	428 aa		13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	SRCIN1	Q9C0H9	1055 aa		13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	C1orf115	Q9H7X2	142 aa		13.35	□□□□□ -0.27
LRRC49-215	ENST00000559201	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.34	□□□□□ -0.27
LRRC49-215	ENST00000559201	ALDH1L1	O75891	902 aa		13.34	□□□□□ -0.27
LRRC49-215	ENST00000559201	EIF2S2	P20042	333 aa	Known RBP	13.34	□□□□□ -0.27
LRRC49-215	ENST00000559201	ATP8B2	P98198	1209 aa		13.34	□□□□□ -0.27
LRRC49-215	ENST00000559201	BECN1	Q14457	450 aa		13.34	□□□□□ -0.27
LRRC49-215	ENST00000559201	MEIS3	Q99687	375 aa		13.34	□□□□□ -0.27
LRRC49-215	ENST00000559201		F6X3S4	739 aa		13.33	□□□□□ -0.28
LRRC49-215	ENST00000559201	CHRNA2	Q15822	529 aa		13.33	□□□□□ -0.28
LRRC49-215	ENST00000559201	ZNF790	Q6PG37	636 aa		13.33	□□□□□ -0.28
LRRC49-215	ENST00000559201	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
LRRC49-215	ENST00000559201	FAM208A	Q9UK61	1670 aa	Known RBP	13.33	□□□□□ -0.28
LRRC49-215	ENST00000559201	ERVV-2	B6SEH9	535 aa		13.32	□□□□□ -0.28
LRRC49-215	ENST00000559201	UBTFL1	P0CB47	393 aa	Predicted RBP	13.32	□□□□□ -0.28
LRRC49-215	ENST00000559201	EVA1C	P58658	441 aa		13.32	□□□□□ -0.28
LRRC49-215	ENST00000559201	TOM1L2	Q6ZVM7	507 aa		13.32	□□□□□ -0.28
LRRC49-215	ENST00000559201	ZCRB1	Q8TBF4	217 aa	Known RBP	13.32	□□□□□ -0.28
LRRC49-215	ENST00000559201	DNAAF4	Q8WXU2	420 aa		13.32	□□□□□ -0.28
LRRC49-215	ENST00000559201	ATP10D	Q9P241	1426 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	COL18A1	P39060	1754 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	RAB11FIP3	O75154	756 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	SNRPA1	P09661	255 aa	Known RBP	13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	NKX1-1	Q15270	411 aa	Predicted RBP	13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	KSR2	Q6VAB6	950 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	TTC5	Q8N0Z6	440 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	NECTIN2	Q92692	538 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	CHPF2	Q9P2E5	772 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	PCDH11X	Q9BZA7	1347 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	PCDH11Y	Q9BZA8	1340 aa		13.31	□□□□□ -0.28
LRRC49-215	ENST00000559201	KCNQ3	O43525	872 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	CABP4	P57796	275 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	HSP90AB4P	Q58FF6	505 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	BEND3	Q5T5X7	828 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	TBC1D32	Q96NH3	1257 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	FMNL2	Q96PY5	1086 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	USP44	Q9H0E7	712 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	RNF216	Q9NWF9	866 aa	Predicted RBP	13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	ADAMTS7	Q9UKP4	1686 aa		13.3	□□□□□ -0.28
LRRC49-215	ENST00000559201	IL2RB	P14784	551 aa		13.29	□□□□□ -0.28
LRRC49-215	ENST00000559201	NFATC2IP	Q8NCF5	419 aa		13.29	□□□□□ -0.28
LRRC49-215	ENST00000559201	PHAX	Q9H814	394 aa	Known RBP	13.29	□□□□□ -0.28
LRRC49-215	ENST00000559201	ERBB4	Q15303	1308 aa		13.29	□□□□□ -0.28
LRRC49-215	ENST00000559201	PI4KAP2	A4QPH2	592 aa		13.28	□□□□□ -0.28
LRRC49-215	ENST00000559201	CYP27B1	O15528	508 aa		13.28	□□□□□ -0.28
LRRC49-215	ENST00000559201	LARP1	Q6PKG0	1096 aa	Known RBP	13.28	□□□□□ -0.28

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