RNA–Protein interactions for RNA: ENST00000559145.1

RORA-209, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-209ENST00000559145 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
RORA-209ENST00000559145 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
RORA-209ENST00000559145 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
RORA-209ENST00000559145 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
RORA-209ENST00000559145 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
RORA-209ENST00000559145 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
RORA-209ENST00000559145 CHL1O00533 1208 aa13.3□□□□□ -0.28
RORA-209ENST00000559145 POTEAQ6S8J7 498 aa13.3□□□□□ -0.28
RORA-209ENST00000559145 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
RORA-209ENST00000559145 BABAM1Q9NWV8 329 aa13.3□□□□□ -0.28
RORA-209ENST00000559145 DOT1LQ8TEK3 1739 aa13.3□□□□□ -0.28
RORA-209ENST00000559145 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
RORA-209ENST00000559145 EXOSC9Q06265 439 aaKnown RBP13.29□□□□□ -0.28
RORA-209ENST00000559145 KRT27Q7Z3Y8 459 aa13.29□□□□□ -0.28
RORA-209ENST00000559145 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
RORA-209ENST00000559145 ACSBG1Q96GR2 724 aa13.29□□□□□ -0.28
RORA-209ENST00000559145 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
RORA-209ENST00000559145 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
RORA-209ENST00000559145 RGS12O14924 1447 aa13.28□□□□□ -0.28
RORA-209ENST00000559145 FAM182BQ5T319 152 aa13.27□□□□□ -0.29
RORA-209ENST00000559145 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
RORA-209ENST00000559145 KDM3BQ7LBC6 1761 aa13.26□□□□□ -0.29
RORA-209ENST00000559145 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
RORA-209ENST00000559145 KCNQ3O43525 872 aa13.25□□□□□ -0.29
RORA-209ENST00000559145 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
RORA-209ENST00000559145 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
RORA-209ENST00000559145 PIGBQ92521 554 aa13.25□□□□□ -0.29
RORA-209ENST00000559145 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
RORA-209ENST00000559145 BRWD3Q6RI45 1802 aa13.25□□□□□ -0.29
RORA-209ENST00000559145 BCL9O00512 1426 aa13.24□□□□□ -0.29
RORA-209ENST00000559145 EIF4A1P60842 406 aaKnown RBP13.24□□□□□ -0.29
RORA-209ENST00000559145 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
RORA-209ENST00000559145 FAM196AQ6ZSG2 479 aa13.24□□□□□ -0.29
RORA-209ENST00000559145 C8orf58Q8NAV2 365 aa13.24□□□□□ -0.29
RORA-209ENST00000559145 ITGB4P16144 1822 aa13.23□□□□□ -0.29
RORA-209ENST00000559145 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
RORA-209ENST00000559145 FMNL2Q96PY5 1086 aa13.23□□□□□ -0.29
RORA-209ENST00000559145 PAPPAQ13219 1627 aa13.23□□□□□ -0.29
RORA-209ENST00000559145 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
RORA-209ENST00000559145 KCNQ2O43526 872 aa13.22□□□□□ -0.29
RORA-209ENST00000559145 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
RORA-209ENST00000559145 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
RORA-209ENST00000559145 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
RORA-209ENST00000559145 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
RORA-209ENST00000559145 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
RORA-209ENST00000559145 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
RORA-209ENST00000559145 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
RORA-209ENST00000559145 VAMP4O75379 141 aa13.2□□□□□ -0.3
RORA-209ENST00000559145 SMARCC1Q92922 1105 aaPredicted RBP13.2□□□□□ -0.3
RORA-209ENST00000559145 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
RORA-209ENST00000559145 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
RORA-209ENST00000559145 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
RORA-209ENST00000559145 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
RORA-209ENST00000559145 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
RORA-209ENST00000559145 HOXB7P09629 217 aa13.19□□□□□ -0.3
RORA-209ENST00000559145 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
RORA-209ENST00000559145 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
RORA-209ENST00000559145 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
RORA-209ENST00000559145 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
RORA-209ENST00000559145 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
RORA-209ENST00000559145 BCL2L13Q9BXK5 485 aa13.19□□□□□ -0.3
RORA-209ENST00000559145 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
RORA-209ENST00000559145 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
RORA-209ENST00000559145 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
RORA-209ENST00000559145 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
RORA-209ENST00000559145 TRIM37O94972 964 aa13.18□□□□□ -0.3
RORA-209ENST00000559145 RARSP54136 660 aaKnown RBP13.18□□□□□ -0.3
RORA-209ENST00000559145 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
RORA-209ENST00000559145 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
RORA-209ENST00000559145 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
RORA-209ENST00000559145 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
RORA-209ENST00000559145 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
RORA-209ENST00000559145 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
RORA-209ENST00000559145 PTF1AQ7RTS3 328 aa13.17□□□□□ -0.3
RORA-209ENST00000559145 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
RORA-209ENST00000559145 SSH1Q8WYL5 1049 aa13.17□□□□□ -0.3
RORA-209ENST00000559145 BTAF1O14981 1849 aa13.17□□□□□ -0.3
RORA-209ENST00000559145 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
RORA-209ENST00000559145 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
RORA-209ENST00000559145 C5P01031 1676 aa13.16□□□□□ -0.3
RORA-209ENST00000559145 BCAR3O75815 825 aa13.16□□□□□ -0.3
RORA-209ENST00000559145 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.3
RORA-209ENST00000559145 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.3
RORA-209ENST00000559145 SIK1P57059 783 aa13.15□□□□□ -0.3
RORA-209ENST00000559145 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
RORA-209ENST00000559145 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
RORA-209ENST00000559145 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
RORA-209ENST00000559145 KIF16BQ96L93 1317 aa13.14□□□□□ -0.31
RORA-209ENST00000559145 STARD3NLO95772 234 aa13.14□□□□□ -0.31
RORA-209ENST00000559145 NEFLP07196 543 aa13.14□□□□□ -0.31
RORA-209ENST00000559145 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
RORA-209ENST00000559145 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
RORA-209ENST00000559145 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
RORA-209ENST00000559145 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
RORA-209ENST00000559145 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
RORA-209ENST00000559145 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
RORA-209ENST00000559145 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
RORA-209ENST00000559145 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
RORA-209ENST00000559145 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
RORA-209ENST00000559145 APBA3O96018 575 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms