RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 EN1Q05925 392 aaPredicted RBP14.45□□□□□ -0.1
TPM1-217ENST00000559108 PROM2Q8N271 834 aa14.45□□□□□ -0.1
TPM1-217ENST00000559108 C5P01031 1676 aa14.45□□□□□ -0.1
TPM1-217ENST00000559108 CICQ96RK0 1608 aaPredicted RBP14.44□□□□□ -0.1
TPM1-217ENST00000559108 MAPK8IP3Q9UPT6 1336 aa14.44□□□□□ -0.1
TPM1-217ENST00000559108 APBA3O96018 575 aa14.44□□□□□ -0.1
TPM1-217ENST00000559108 EZH2Q15910 746 aaKnown RBP14.44□□□□□ -0.1
TPM1-217ENST00000559108 NFATC2IPQ8NCF5 419 aa14.44□□□□□ -0.1
TPM1-217ENST00000559108 CAMKK2Q96RR4 588 aa14.44□□□□□ -0.1
TPM1-217ENST00000559108 ERVV-2B6SEH9 535 aa14.43□□□□□ -0.1
TPM1-217ENST00000559108 HSP90AB1P08238 724 aaKnown RBP14.43□□□□□ -0.1
TPM1-217ENST00000559108 KCNQ4P56696 695 aa14.43□□□□□ -0.1
TPM1-217ENST00000559108 SLC52A2Q9HAB3 445 aa14.43□□□□□ -0.1
TPM1-217ENST00000559108 ASAP1Q9ULH1 1129 aa14.43□□□□□ -0.1
TPM1-217ENST00000559108 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
TPM1-217ENST00000559108 RIPK4P57078 832 aa14.42□□□□□ -0.1
TPM1-217ENST00000559108 NEUROD2Q15784 382 aa14.42□□□□□ -0.1
TPM1-217ENST00000559108 SLC4A9Q96Q91 983 aa14.42□□□□□ -0.1
TPM1-217ENST00000559108 ATG3Q9NT62 314 aa14.42□□□□□ -0.1
TPM1-217ENST00000559108 TMOD3Q9NYL9 352 aa14.42□□□□□ -0.1
TPM1-217ENST00000559108 KCNQ3O43525 872 aa14.41□□□□□ -0.1
TPM1-217ENST00000559108 CABP4P57796 275 aa14.41□□□□□ -0.1
TPM1-217ENST00000559108 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
TPM1-217ENST00000559108 LRRC4BQ9NT99 713 aa14.41□□□□□ -0.1
TPM1-217ENST00000559108 PALLDQ8WX93 1383 aa14.41□□□□□ -0.1
TPM1-217ENST00000559108 MYH14Q7Z406 1995 aaKnown RBP14.4□□□□□ -0.1
TPM1-217ENST00000559108 HTATSF1O43719 755 aaKnown RBP14.39□□□□□ -0.11
TPM1-217ENST00000559108 CCDC125Q86Z20 511 aa14.39□□□□□ -0.11
TPM1-217ENST00000559108 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
TPM1-217ENST00000559108 MIS18AQ9NYP9 233 aa14.39□□□□□ -0.11
TPM1-217ENST00000559108 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
TPM1-217ENST00000559108 PLSCR1O15162 318 aa14.38□□□□□ -0.11
TPM1-217ENST00000559108 TXNRD1Q16881 649 aa14.38□□□□□ -0.11
TPM1-217ENST00000559108 LAMB4A4D0S4 1761 aa14.37□□□□□ -0.11
TPM1-217ENST00000559108 BAG6P46379 1132 aa14.37□□□□□ -0.11
TPM1-217ENST00000559108 ITPK1Q13572 414 aa14.37□□□□□ -0.11
TPM1-217ENST00000559108 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
TPM1-217ENST00000559108 UBR3Q6ZT12 1888 aa14.37□□□□□ -0.11
TPM1-217ENST00000559108 NEFMP07197 916 aa14.36□□□□□ -0.11
TPM1-217ENST00000559108 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
TPM1-217ENST00000559108 TEFQ10587 303 aa14.35□□□□□ -0.11
TPM1-217ENST00000559108 SF3B2Q13435 895 aaKnown RBP14.35□□□□□ -0.11
TPM1-217ENST00000559108 RTF1Q92541 710 aaKnown RBP14.35□□□□□ -0.11
TPM1-217ENST00000559108 ZNF521Q96K83 1311 aa14.35□□□□□ -0.11
TPM1-217ENST00000559108 QSER1Q2KHR3 1735 aa14.35□□□□□ -0.11
TPM1-217ENST00000559108 CASZ1Q86V15 1759 aa14.34□□□□□ -0.11
TPM1-217ENST00000559108 PRAMEF22A3QJZ6 481 aa14.34□□□□□ -0.11
TPM1-217ENST00000559108 PTCD1O75127 700 aaKnown RBP14.34□□□□□ -0.11
TPM1-217ENST00000559108 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
TPM1-217ENST00000559108 AMIGO3Q86WK7 504 aa14.34□□□□□ -0.11
TPM1-217ENST00000559108 WWC1Q8IX03 1113 aa14.34□□□□□ -0.11
TPM1-217ENST00000559108 ZNF496Q96IT1 587 aaPredicted RBP14.34□□□□□ -0.11
TPM1-217ENST00000559108 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
TPM1-217ENST00000559108 C4AP0C0L4 1744 aa14.33□□□□□ -0.12
TPM1-217ENST00000559108 LOC102724428A0A0B4J2F2 783 aa14.33□□□□□ -0.12
TPM1-217ENST00000559108 BTBD11A6QL63 1104 aa14.33□□□□□ -0.12
TPM1-217ENST00000559108 SIK1P57059 783 aa14.33□□□□□ -0.12
TPM1-217ENST00000559108 TAF7Q15545 349 aaPredicted RBP14.33□□□□□ -0.12
TPM1-217ENST00000559108 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
TPM1-217ENST00000559108 LINC00116Q8NCU8 138 aa14.33□□□□□ -0.12
TPM1-217ENST00000559108 CCNL1Q9UK58 526 aaPredicted RBP14.33□□□□□ -0.12
TPM1-217ENST00000559108 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
TPM1-217ENST00000559108 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
TPM1-217ENST00000559108 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
TPM1-217ENST00000559108 KRT24Q2M2I5 525 aa14.32□□□□□ -0.12
TPM1-217ENST00000559108 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
TPM1-217ENST00000559108 CHL1O00533 1208 aa14.31□□□□□ -0.12
TPM1-217ENST00000559108 LMOD3Q0VAK6 560 aa14.31□□□□□ -0.12
TPM1-217ENST00000559108 DNAJC10Q8IXB1 793 aa14.31□□□□□ -0.12
TPM1-217ENST00000559108 SMARCC1Q92922 1105 aaPredicted RBP14.31□□□□□ -0.12
TPM1-217ENST00000559108 RBM42Q9BTD8 480 aaKnown RBP14.31□□□□□ -0.12
TPM1-217ENST00000559108 PDGFDQ9GZP0 370 aaPredicted RBP14.3□□□□□ -0.12
TPM1-217ENST00000559108 ATP6V1AP38606 617 aa14.29□□□□□ -0.12
TPM1-217ENST00000559108 EIF4A1P60842 406 aaKnown RBP14.29□□□□□ -0.12
TPM1-217ENST00000559108 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
TPM1-217ENST00000559108 SLC27A3Q5K4L6 730 aa14.29□□□□□ -0.12
TPM1-217ENST00000559108 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
TPM1-217ENST00000559108 MBIPQ9NS73 344 aa14.29□□□□□ -0.12
TPM1-217ENST00000559108 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
TPM1-217ENST00000559108 LAS1LQ9Y4W2 734 aaKnown RBP14.28□□□□□ -0.12
TPM1-217ENST00000559108 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
TPM1-217ENST00000559108 TSPYL4Q9UJ04 414 aa14.27□□□□□ -0.13
TPM1-217ENST00000559108 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
TPM1-217ENST00000559108 CYP19A1P11511 503 aaPredicted RBP14.26□□□□□ -0.13
TPM1-217ENST00000559108 INTS5Q6P9B9 1019 aaKnown RBP14.26□□□□□ -0.13
TPM1-217ENST00000559108 TTC5Q8N0Z6 440 aa14.26□□□□□ -0.13
TPM1-217ENST00000559108 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
TPM1-217ENST00000559108 IFT57Q9NWB7 429 aa14.26□□□□□ -0.13
TPM1-217ENST00000559108 USP16Q9Y5T5 823 aa14.26□□□□□ -0.13
TPM1-217ENST00000559108 COL24A1Q17RW2 1714 aa14.26□□□□□ -0.13
TPM1-217ENST00000559108 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
TPM1-217ENST00000559108 GIGYF1O75420 1035 aaPredicted RBP14.25□□□□□ -0.13
TPM1-217ENST00000559108 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
TPM1-217ENST00000559108 FMNL2Q96PY5 1086 aa14.25□□□□□ -0.13
TPM1-217ENST00000559108 IL16Q14005 1332 aa14.24□□□□□ -0.13
TPM1-217ENST00000559108 PNPLA7Q6ZV29 1317 aa14.24□□□□□ -0.13
TPM1-217ENST00000559108 CNTNAP4Q9C0A0 1308 aa14.24□□□□□ -0.13
TPM1-217ENST00000559108 CRKLP46109 303 aaKnown RBP14.24□□□□□ -0.13
TPM1-217ENST00000559108 R3HDM1Q15032 1099 aaKnown RBP14.24□□□□□ -0.13
TPM1-217ENST00000559108 SLC15A2Q16348 729 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms