RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 CCDC87Q9NVE4 849 aa11.38□□□□□ -0.59
HMG20A-208ENST00000559099 RGPD2P0DJD1 1756 aa11.38□□□□□ -0.59
HMG20A-208ENST00000559099 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
HMG20A-208ENST00000559099 ITGB4P16144 1822 aa11.37□□□□□ -0.59
HMG20A-208ENST00000559099 LMNB1P20700 586 aa11.37□□□□□ -0.59
HMG20A-208ENST00000559099 GNPATO15228 680 aa11.36□□□□□ -0.59
HMG20A-208ENST00000559099 MAP2K1Q02750 393 aaPredicted RBP11.36□□□□□ -0.59
HMG20A-208ENST00000559099 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
HMG20A-208ENST00000559099 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
HMG20A-208ENST00000559099 RASSF10A6NK89 507 aa11.35□□□□□ -0.59
HMG20A-208ENST00000559099 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
HMG20A-208ENST00000559099 CHRNA5P30532 468 aa11.35□□□□□ -0.59
HMG20A-208ENST00000559099 USP31Q70CQ4 1352 aa11.35□□□□□ -0.59
HMG20A-208ENST00000559099 TMF1P82094 1093 aa11.34□□□□□ -0.59
HMG20A-208ENST00000559099 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
HMG20A-208ENST00000559099 NLGN1Q8N2Q7 840 aa11.34□□□□□ -0.59
HMG20A-208ENST00000559099 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
HMG20A-208ENST00000559099 SZT2Q5T011 3432 aa11.34□□□□□ -0.59
HMG20A-208ENST00000559099 ITPK1Q13572 414 aa11.33□□□□□ -0.6
HMG20A-208ENST00000559099 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
HMG20A-208ENST00000559099 GYS1P13807 737 aa11.32□□□□□ -0.6
HMG20A-208ENST00000559099 LTV1Q96GA3 475 aaPredicted RBP11.32□□□□□ -0.6
HMG20A-208ENST00000559099 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
HMG20A-208ENST00000559099 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
HMG20A-208ENST00000559099 LOC102724428A0A0B4J2F2 783 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 SOX10P56693 466 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 SIK1P57059 783 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
HMG20A-208ENST00000559099 SMARCC1Q92922 1105 aaPredicted RBP11.31□□□□□ -0.6
HMG20A-208ENST00000559099 PARP3Q9Y6F1 533 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 A0A0C4DFX4 3053 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
HMG20A-208ENST00000559099 ADAMTSL1Q8N6G6 1762 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
HMG20A-208ENST00000559099 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
HMG20A-208ENST00000559099 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
HMG20A-208ENST00000559099 NFKBIEO00221 500 aa11.3□□□□□ -0.6
HMG20A-208ENST00000559099 IP6K1Q92551 441 aa11.3□□□□□ -0.6
HMG20A-208ENST00000559099 KTN1Q86UP2 1357 aaKnown RBP11.29□□□□□ -0.6
HMG20A-208ENST00000559099 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
HMG20A-208ENST00000559099 NME9Q86XW9 330 aa11.29□□□□□ -0.6
HMG20A-208ENST00000559099 PIGBQ92521 554 aa11.29□□□□□ -0.6
HMG20A-208ENST00000559099 CUL9Q8IWT3 2517 aa11.29□□□□□ -0.6
HMG20A-208ENST00000559099 DDR1Q08345 913 aa11.28□□□□□ -0.6
HMG20A-208ENST00000559099 DGKZQ13574 1117 aa11.28□□□□□ -0.6
HMG20A-208ENST00000559099 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
HMG20A-208ENST00000559099 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
HMG20A-208ENST00000559099 CD163L1Q9NR16 1453 aa11.27□□□□□ -0.6
HMG20A-208ENST00000559099 MKI67P46013 3256 aaKnown RBP11.27□□□□□ -0.61
HMG20A-208ENST00000559099 TRAPPC3LQ5T215 181 aa11.27□□□□□ -0.61
HMG20A-208ENST00000559099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMG20A-208ENST00000559099 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
HMG20A-208ENST00000559099 SBNO2Q9Y2G9 1366 aa11.27□□□□□ -0.61
HMG20A-208ENST00000559099 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
HMG20A-208ENST00000559099 SCN4AP35499 1836 aa11.26□□□□□ -0.61
HMG20A-208ENST00000559099 NBPF1Q3BBV0 1214 aa11.26□□□□□ -0.61
HMG20A-208ENST00000559099 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
HMG20A-208ENST00000559099 BEGAINQ9BUH8 593 aa11.26□□□□□ -0.61
HMG20A-208ENST00000559099 CGNL1Q0VF96 1302 aa11.26□□□□□ -0.61
HMG20A-208ENST00000559099 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
HMG20A-208ENST00000559099 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
HMG20A-208ENST00000559099 CYP27B1O15528 508 aa11.25□□□□□ -0.61
HMG20A-208ENST00000559099 DDNO94850 711 aaPredicted RBP11.25□□□□□ -0.61
HMG20A-208ENST00000559099 RTCBQ9Y3I0 505 aaKnown RBP11.25□□□□□ -0.61
HMG20A-208ENST00000559099 KDRP35968 1356 aa11.25□□□□□ -0.61
HMG20A-208ENST00000559099 ADRA2BP18089 450 aa11.24□□□□□ -0.61
HMG20A-208ENST00000559099 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
HMG20A-208ENST00000559099 USHBP1Q8N6Y0 703 aa11.24□□□□□ -0.61
HMG20A-208ENST00000559099 CAPNS2Q96L46 248 aa11.24□□□□□ -0.61
HMG20A-208ENST00000559099 TAF1DQ9H5J8 278 aaPredicted RBP11.24□□□□□ -0.61
HMG20A-208ENST00000559099 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
HMG20A-208ENST00000559099 ASAP1Q9ULH1 1129 aa11.24□□□□□ -0.61
HMG20A-208ENST00000559099 ABT1Q9ULW3 272 aaKnown RBP11.24□□□□□ -0.61
HMG20A-208ENST00000559099 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
HMG20A-208ENST00000559099 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
HMG20A-208ENST00000559099 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
HMG20A-208ENST00000559099 FKBP8Q14318 412 aa11.23□□□□□ -0.61
HMG20A-208ENST00000559099 ERFEQ4G0M1 354 aa11.23□□□□□ -0.61
HMG20A-208ENST00000559099 NBPF6Q5VWK0 638 aa11.23□□□□□ -0.61
HMG20A-208ENST00000559099 GCC1Q96CN9 775 aa11.23□□□□□ -0.61
HMG20A-208ENST00000559099 NBPF4Q96M43 638 aa11.23□□□□□ -0.61
HMG20A-208ENST00000559099 GPR101Q96P66 508 aaPredicted RBP11.23□□□□□ -0.61
HMG20A-208ENST00000559099 MYH14Q7Z406 1995 aaKnown RBP11.23□□□□□ -0.61
HMG20A-208ENST00000559099 DLL1O00548 723 aa11.22□□□□□ -0.61
HMG20A-208ENST00000559099 HOXC9P31274 260 aa11.22□□□□□ -0.61
HMG20A-208ENST00000559099 RFC4P35249 363 aa11.22□□□□□ -0.61
HMG20A-208ENST00000559099 CYP4F22Q6NT55 531 aa11.22□□□□□ -0.61
HMG20A-208ENST00000559099 EVC2Q86UK5 1308 aa11.22□□□□□ -0.61
HMG20A-208ENST00000559099 AFDNP55196 1824 aaKnown RBP11.21□□□□□ -0.61
HMG20A-208ENST00000559099 NRXN2Q9P2S2 1712 aa11.21□□□□□ -0.61
HMG20A-208ENST00000559099 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.61
HMG20A-208ENST00000559099 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.61
HMG20A-208ENST00000559099 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.61
HMG20A-208ENST00000559099 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
HMG20A-208ENST00000559099 SLC4A9Q96Q91 983 aa11.21□□□□□ -0.61
HMG20A-208ENST00000559099 SRP68Q9UHB9 627 aaKnown RBP11.21□□□□□ -0.61
HMG20A-208ENST00000559099 IQCA1LA6NCM1 817 aa11.2□□□□□ -0.62
HMG20A-208ENST00000559099 AOC2O75106 756 aa11.2□□□□□ -0.62
HMG20A-208ENST00000559099 GRM1Q13255 1194 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms