RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
CDC42BPB-204ENST00000559043 WDR63Q8IWG1 891 aa20.55■□□□□ 0.88
CDC42BPB-204ENST00000559043 MIS18AQ9NYP9 233 aa20.55■□□□□ 0.88
CDC42BPB-204ENST00000559043 KCNQ2O43526 872 aa20.54■□□□□ 0.88
CDC42BPB-204ENST00000559043 ACSBG1Q96GR2 724 aa20.54■□□□□ 0.88
CDC42BPB-204ENST00000559043 CCDC136Q96JN2 1154 aa20.54■□□□□ 0.88
CDC42BPB-204ENST00000559043 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
CDC42BPB-204ENST00000559043 KAT6BQ8WYB5 2073 aa20.53■□□□□ 0.88
CDC42BPB-204ENST00000559043 SLC52A2Q9HAB3 445 aa20.53■□□□□ 0.88
CDC42BPB-204ENST00000559043 ERVV-2B6SEH9 535 aa20.52■□□□□ 0.88
CDC42BPB-204ENST00000559043 ZNF853P0CG23 659 aa20.52■□□□□ 0.88
CDC42BPB-204ENST00000559043 CABP4P57796 275 aa20.51■□□□□ 0.87
CDC42BPB-204ENST00000559043 GOLGA2Q08379 1002 aa20.51■□□□□ 0.87
CDC42BPB-204ENST00000559043 TAF7Q15545 349 aaPredicted RBP20.51■□□□□ 0.87
CDC42BPB-204ENST00000559043 PIGBQ92521 554 aa20.51■□□□□ 0.87
CDC42BPB-204ENST00000559043 LAS1LQ9Y4W2 734 aaKnown RBP20.51■□□□□ 0.87
CDC42BPB-204ENST00000559043 TEFQ10587 303 aa20.5■□□□□ 0.87
CDC42BPB-204ENST00000559043 CHL1O00533 1208 aa20.5■□□□□ 0.87
CDC42BPB-204ENST00000559043 KCNQ3O43525 872 aa20.5■□□□□ 0.87
CDC42BPB-204ENST00000559043 SLFN5Q08AF3 891 aa20.5■□□□□ 0.87
CDC42BPB-204ENST00000559043 ITGB4P16144 1822 aa20.49■□□□□ 0.87
CDC42BPB-204ENST00000559043 BCL9O00512 1426 aa20.49■□□□□ 0.87
CDC42BPB-204ENST00000559043 MRC1P22897 1456 aa20.49■□□□□ 0.87
CDC42BPB-204ENST00000559043 TRMT2AQ8IZ69 625 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-204ENST00000559043 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
CDC42BPB-204ENST00000559043 DOT1LQ8TEK3 1739 aa20.49■□□□□ 0.87
CDC42BPB-204ENST00000559043 SIPA1L3O60292 1781 aaPredicted RBP20.49■□□□□ 0.87
CDC42BPB-204ENST00000559043 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
CDC42BPB-204ENST00000559043 TSR2Q969E8 191 aaKnown RBP20.48■□□□□ 0.87
CDC42BPB-204ENST00000559043 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
CDC42BPB-204ENST00000559043 IL16Q14005 1332 aa20.48■□□□□ 0.87
CDC42BPB-204ENST00000559043 SLC39A6Q13433 755 aa20.48■□□□□ 0.87
CDC42BPB-204ENST00000559043 MBIPQ9NS73 344 aa20.48■□□□□ 0.87
CDC42BPB-204ENST00000559043 FAM196AQ6ZSG2 479 aa20.47■□□□□ 0.87
CDC42BPB-204ENST00000559043 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
CDC42BPB-204ENST00000559043 IFT57Q9NWB7 429 aa20.47■□□□□ 0.87
CDC42BPB-204ENST00000559043 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
CDC42BPB-204ENST00000559043 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
CDC42BPB-204ENST00000559043 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
CDC42BPB-204ENST00000559043 CALD1Q05682 793 aaKnown RBP20.46■□□□□ 0.87
CDC42BPB-204ENST00000559043 ASAP1Q9ULH1 1129 aa20.46■□□□□ 0.87
CDC42BPB-204ENST00000559043 GNAI1P63096 354 aa20.45■□□□□ 0.86
CDC42BPB-204ENST00000559043 FANCIQ9NVI1 1328 aa20.44■□□□□ 0.86
CDC42BPB-204ENST00000559043 E9PSI1 815 aa20.44■□□□□ 0.86
CDC42BPB-204ENST00000559043 ATG3Q9NT62 314 aa20.44■□□□□ 0.86
CDC42BPB-204ENST00000559043 TSPYL4Q9UJ04 414 aa20.44■□□□□ 0.86
CDC42BPB-204ENST00000559043 TRIM37O94972 964 aa20.43■□□□□ 0.86
CDC42BPB-204ENST00000559043 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
CDC42BPB-204ENST00000559043 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
CDC42BPB-204ENST00000559043 BABAM1Q9NWV8 329 aa20.41■□□□□ 0.86
CDC42BPB-204ENST00000559043 BCL11BQ9C0K0 894 aaPredicted RBP20.41■□□□□ 0.86
CDC42BPB-204ENST00000559043 C8orf58Q8NAV2 365 aa20.4■□□□□ 0.86
CDC42BPB-204ENST00000559043 KDM3BQ7LBC6 1761 aa20.4■□□□□ 0.86
CDC42BPB-204ENST00000559043 NHSQ6T4R5 1651 aa20.4■□□□□ 0.86
CDC42BPB-204ENST00000559043 EIF4A1P60842 406 aaKnown RBP20.39■□□□□ 0.86
CDC42BPB-204ENST00000559043 TSPYL6Q8N831 410 aa20.39■□□□□ 0.86
CDC42BPB-204ENST00000559043 ZNF496Q96IT1 587 aaPredicted RBP20.39■□□□□ 0.86
CDC42BPB-204ENST00000559043 MYH16Q9H6N6 1097 aa20.39■□□□□ 0.86
CDC42BPB-204ENST00000559043 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-204ENST00000559043 PLIN1O60240 522 aa20.38■□□□□ 0.85
CDC42BPB-204ENST00000559043 PRAMEF22A3QJZ6 481 aa20.37■□□□□ 0.85
CDC42BPB-204ENST00000559043 ELL2O00472 640 aaPredicted RBP20.37■□□□□ 0.85
CDC42BPB-204ENST00000559043 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
CDC42BPB-204ENST00000559043 SLC4A9Q96Q91 983 aa20.37■□□□□ 0.85
CDC42BPB-204ENST00000559043 BTAF1O14981 1849 aa20.37■□□□□ 0.85
CDC42BPB-204ENST00000559043 PAPPAQ13219 1627 aa20.37■□□□□ 0.85
CDC42BPB-204ENST00000559043 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
CDC42BPB-204ENST00000559043 KCPQ6ZWJ8 1503 aa20.36■□□□□ 0.85
CDC42BPB-204ENST00000559043 ILDR2Q71H61 639 aa20.35■□□□□ 0.85
CDC42BPB-204ENST00000559043 TTC5Q8N0Z6 440 aa20.34■□□□□ 0.85
CDC42BPB-204ENST00000559043 CRBNQ96SW2 442 aa20.34■□□□□ 0.85
CDC42BPB-204ENST00000559043 UBR2Q8IWV8 1755 aa20.34■□□□□ 0.85
CDC42BPB-204ENST00000559043 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.84
CDC42BPB-204ENST00000559043 KCNQ4P56696 695 aa20.33■□□□□ 0.84
CDC42BPB-204ENST00000559043 RBM42Q9BTD8 480 aaKnown RBP20.33■□□□□ 0.84
CDC42BPB-204ENST00000559043 PALLDQ8WX93 1383 aa20.32■□□□□ 0.84
CDC42BPB-204ENST00000559043 VAMP4O75379 141 aa20.32■□□□□ 0.84
CDC42BPB-204ENST00000559043 FMNL2Q96PY5 1086 aa20.32■□□□□ 0.84
CDC42BPB-204ENST00000559043 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
CDC42BPB-204ENST00000559043 APBA3O96018 575 aa20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 C20orf194Q5TEA3 1177 aa20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 PROM2Q8N271 834 aa20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 LOC102724428A0A0B4J2F2 783 aa20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 SIK1P57059 783 aa20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 SMARCC1Q92922 1105 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-204ENST00000559043 TNS1Q9HBL0 1735 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-204ENST00000559043 MSH5O43196 834 aa20.28■□□□□ 0.84
CDC42BPB-204ENST00000559043 ITPK1Q13572 414 aa20.28■□□□□ 0.84
CDC42BPB-204ENST00000559043 SNRPA1P09661 255 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-204ENST00000559043 DNAJC10Q8IXB1 793 aa20.28■□□□□ 0.84
CDC42BPB-204ENST00000559043 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
CDC42BPB-204ENST00000559043 ANP32EQ9BTT0 268 aa20.28■□□□□ 0.84
CDC42BPB-204ENST00000559043 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
CDC42BPB-204ENST00000559043 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
CDC42BPB-204ENST00000559043 C5P01031 1676 aa20.27■□□□□ 0.84
CDC42BPB-204ENST00000559043 PLSCR1O15162 318 aa20.26■□□□□ 0.83
CDC42BPB-204ENST00000559043 EIF2S2P20042 333 aaKnown RBP20.26■□□□□ 0.83
CDC42BPB-204ENST00000559043 ATP6V1AP38606 617 aa20.26■□□□□ 0.83
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