RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
COPS2-206ENST00000559016 RTF1Q92541 710 aaKnown RBP10.99□□□□□ -0.65
COPS2-206ENST00000559016 ARHGAP45Q92619 1136 aa10.99□□□□□ -0.65
COPS2-206ENST00000559016 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
COPS2-206ENST00000559016 SOS1Q07889 1333 aaPredicted RBP10.99□□□□□ -0.65
COPS2-206ENST00000559016 CHL1O00533 1208 aa10.98□□□□□ -0.65
COPS2-206ENST00000559016 ST18O60284 1047 aa10.98□□□□□ -0.65
COPS2-206ENST00000559016 CENPQQ7L2Z9 268 aaPredicted RBP10.98□□□□□ -0.65
COPS2-206ENST00000559016 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
COPS2-206ENST00000559016 SMC4Q9NTJ3 1288 aa10.98□□□□□ -0.65
COPS2-206ENST00000559016 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
COPS2-206ENST00000559016 VAMP4O75379 141 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 IRX5P78411 483 aaPredicted RBP10.97□□□□□ -0.65
COPS2-206ENST00000559016 MTHFSDQ2M296 383 aaKnown RBP10.97□□□□□ -0.65
COPS2-206ENST00000559016 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 SSH1Q8WYL5 1049 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 FRAT1Q92837 279 aaPredicted RBP10.97□□□□□ -0.65
COPS2-206ENST00000559016 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
COPS2-206ENST00000559016 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 MBIPQ9NS73 344 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
COPS2-206ENST00000559016 SPATA31A3Q5VYP0 1347 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 CRB1P82279 1406 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 RGPD2P0DJD1 1756 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 COL18A1P39060 1754 aa10.97□□□□□ -0.65
COPS2-206ENST00000559016 RGPD5Q99666 1765 aa10.96□□□□□ -0.65
COPS2-206ENST00000559016 LMO7Q8WWI1 1683 aa10.96□□□□□ -0.65
COPS2-206ENST00000559016 CPDO75976 1380 aa10.96□□□□□ -0.65
COPS2-206ENST00000559016 MAP3K5Q99683 1374 aa10.96□□□□□ -0.65
COPS2-206ENST00000559016 GNAT3A8MTJ3 354 aa10.96□□□□□ -0.65
COPS2-206ENST00000559016 TWISTNBQ3B726 338 aaPredicted RBP10.96□□□□□ -0.65
COPS2-206ENST00000559016 AMOTQ4VCS5 1084 aa10.96□□□□□ -0.65
COPS2-206ENST00000559016 ATF7IPQ6VMQ6 1270 aa10.96□□□□□ -0.65
COPS2-206ENST00000559016 DZIP1LQ8IYY4 767 aaKnown RBP10.96□□□□□ -0.65
COPS2-206ENST00000559016 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
COPS2-206ENST00000559016 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
COPS2-206ENST00000559016 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 ZNF335Q9H4Z2 1342 aaPredicted RBP10.95□□□□□ -0.66
COPS2-206ENST00000559016 FAM83GA6ND36 823 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 BRINP3Q76B58 766 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 CHMP4AQ9BY43 222 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 SLAIN2Q9P270 581 aa10.95□□□□□ -0.66
COPS2-206ENST00000559016 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
COPS2-206ENST00000559016 TCERG1O14776 1098 aaKnown RBP10.94□□□□□ -0.66
COPS2-206ENST00000559016 PYGBP11216 843 aa10.94□□□□□ -0.66
COPS2-206ENST00000559016 XPCQ01831 940 aaPredicted RBP10.94□□□□□ -0.66
COPS2-206ENST00000559016 MVPQ14764 893 aaKnown RBP10.94□□□□□ -0.66
COPS2-206ENST00000559016 PLEKHO1Q53GL0 409 aaPredicted RBP10.94□□□□□ -0.66
COPS2-206ENST00000559016 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
COPS2-206ENST00000559016 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
COPS2-206ENST00000559016 THUMPD2Q9BTF0 503 aaKnown RBP10.94□□□□□ -0.66
COPS2-206ENST00000559016 DDX19BQ9UMR2 479 aa10.94□□□□□ -0.66
COPS2-206ENST00000559016 NBPF6Q5VWK0 638 aa10.93□□□□□ -0.66
COPS2-206ENST00000559016 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
COPS2-206ENST00000559016 NBPF4Q96M43 638 aa10.93□□□□□ -0.66
COPS2-206ENST00000559016 COG6Q9Y2V7 657 aa10.93□□□□□ -0.66
COPS2-206ENST00000559016 ERBB3P21860 1342 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 TRIM27P14373 513 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 DCTN1Q14203 1278 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 GSE1Q14687 1217 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 AKAP4Q5JQC9 854 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 MCM10Q7L590 875 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 PANK1Q8TE04 598 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 LTV1Q96GA3 475 aaPredicted RBP10.92□□□□□ -0.66
COPS2-206ENST00000559016 BCL2L13Q9BXK5 485 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 API5Q9BZZ5 524 aaKnown RBP10.92□□□□□ -0.66
COPS2-206ENST00000559016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.663e-7■■■□□ 16.9
COPS2-206ENST00000559016 NOB1Q9ULX3 412 aaKnown RBP10.92□□□□□ -0.66
COPS2-206ENST00000559016 ADAMTS7Q9UKP4 1686 aa10.92□□□□□ -0.66
COPS2-206ENST00000559016 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
COPS2-206ENST00000559016 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
COPS2-206ENST00000559016 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
COPS2-206ENST00000559016 C8orf58Q8NAV2 365 aa10.91□□□□□ -0.66
COPS2-206ENST00000559016 KDM3BQ7LBC6 1761 aa10.9□□□□□ -0.66
COPS2-206ENST00000559016 ABCA3Q99758 1704 aa10.9□□□□□ -0.66
COPS2-206ENST00000559016 RLBP1P12271 317 aa10.9□□□□□ -0.66
COPS2-206ENST00000559016 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
COPS2-206ENST00000559016 TSPYL6Q8N831 410 aa10.9□□□□□ -0.66
COPS2-206ENST00000559016 TSPYL4Q9UJ04 414 aa10.9□□□□□ -0.66
COPS2-206ENST00000559016 PTPRCP08575 1304 aa10.89□□□□□ -0.67
COPS2-206ENST00000559016 MKRN3Q13064 507 aaKnown RBP10.89□□□□□ -0.67
COPS2-206ENST00000559016 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
COPS2-206ENST00000559016 IL17REQ8NFR9 667 aa10.89□□□□□ -0.67
COPS2-206ENST00000559016 RWDD1Q9H446 243 aaPredicted RBP10.89□□□□□ -0.67
COPS2-206ENST00000559016 AXIN2Q9Y2T1 843 aa10.89□□□□□ -0.67
COPS2-206ENST00000559016 ABCC4O15439 1325 aa10.88□□□□□ -0.67
COPS2-206ENST00000559016 SIPA1L3O60292 1781 aaPredicted RBP10.88□□□□□ -0.67
COPS2-206ENST00000559016 HOXB7P09629 217 aa10.88□□□□□ -0.67
COPS2-206ENST00000559016 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
COPS2-206ENST00000559016 C1orf141Q5JVX7 400 aa10.88□□□□□ -0.67
COPS2-206ENST00000559016 PKD1L3Q7Z443 1732 aa10.88□□□□□ -0.67
COPS2-206ENST00000559016 L3MBTL3Q96JM7 780 aaPredicted RBP10.88□□□□□ -0.67
COPS2-206ENST00000559016 SCN11AQ9UI33 1791 aa10.88□□□□□ -0.67
COPS2-206ENST00000559016 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
COPS2-206ENST00000559016 HDAC1Q13547 482 aaPredicted RBP10.87□□□□□ -0.67
COPS2-206ENST00000559016 TMEM57Q8N5G2 664 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms