RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 MSH6P52701 1360 aa16.55■□□□□ 0.24
CPNE6-210ENST00000558995 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
CPNE6-210ENST00000558995 C16orf71Q8IYS4 520 aaPredicted RBP16.55■□□□□ 0.24
CPNE6-210ENST00000558995 USP54Q70EL1 1684 aa16.55■□□□□ 0.24
CPNE6-210ENST00000558995 MEIS3Q99687 375 aa16.55■□□□□ 0.24
CPNE6-210ENST00000558995 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
CPNE6-210ENST00000558995 RAB3GAP1Q15042 981 aa16.54■□□□□ 0.24
CPNE6-210ENST00000558995 BBXQ8WY36 941 aaPredicted RBP16.54■□□□□ 0.24
CPNE6-210ENST00000558995 TNPO1Q92973 898 aaKnown RBP16.54■□□□□ 0.24
CPNE6-210ENST00000558995 TSPYL4Q9UJ04 414 aa16.54■□□□□ 0.24
CPNE6-210ENST00000558995 HSP90AA1P07900 732 aaKnown RBP16.54■□□□□ 0.24
CPNE6-210ENST00000558995 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
CPNE6-210ENST00000558995 IP6K1Q92551 441 aa16.54■□□□□ 0.24
CPNE6-210ENST00000558995 GZF1Q9H116 711 aaPredicted RBP16.54■□□□□ 0.24
CPNE6-210ENST00000558995 NFAT5O94916 1531 aa16.53■□□□□ 0.24
CPNE6-210ENST00000558995 GBP4Q96PP9 640 aa16.53■□□□□ 0.24
CPNE6-210ENST00000558995 C19orf44Q9H6X5 657 aa16.53■□□□□ 0.24
CPNE6-210ENST00000558995 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
CPNE6-210ENST00000558995 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
CPNE6-210ENST00000558995 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
CPNE6-210ENST00000558995 HMMRO75330 724 aa16.52■□□□□ 0.23
CPNE6-210ENST00000558995 CCT4P50991 539 aaKnown RBP16.52■□□□□ 0.23
CPNE6-210ENST00000558995 RABEP1Q15276 862 aa16.52■□□□□ 0.23
CPNE6-210ENST00000558995 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.23
CPNE6-210ENST00000558995 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
CPNE6-210ENST00000558995 GCP02774 474 aa16.51■□□□□ 0.23
CPNE6-210ENST00000558995 OTUD7AQ8TE49 926 aaPredicted RBP16.51■□□□□ 0.23
CPNE6-210ENST00000558995 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
CPNE6-210ENST00000558995 LTN1O94822 1766 aa16.51■□□□□ 0.23
CPNE6-210ENST00000558995 C1orf167Q5SNV9 1468 aa16.51■□□□□ 0.23
CPNE6-210ENST00000558995 HTATSF1O43719 755 aaKnown RBP16.51■□□□□ 0.23
CPNE6-210ENST00000558995 XRCC6P12956 609 aaKnown RBP eCLIP16.51■□□□□ 0.23
CPNE6-210ENST00000558995 KRT28Q7Z3Y7 464 aa16.51■□□□□ 0.23
CPNE6-210ENST00000558995 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
CPNE6-210ENST00000558995 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
CPNE6-210ENST00000558995 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
CPNE6-210ENST00000558995 USP26Q9BXU7 913 aa16.5■□□□□ 0.23
CPNE6-210ENST00000558995 SDSP20132 328 aa16.5■□□□□ 0.23
CPNE6-210ENST00000558995 PTMSP20962 102 aa16.5■□□□□ 0.23
CPNE6-210ENST00000558995 G2E3Q7L622 706 aa16.5■□□□□ 0.23
CPNE6-210ENST00000558995 GNAT3A8MTJ3 354 aa16.49■□□□□ 0.23
CPNE6-210ENST00000558995 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
CPNE6-210ENST00000558995 IL17REQ8NFR9 667 aa16.49■□□□□ 0.23
CPNE6-210ENST00000558995 SLC4A10Q6U841 1118 aa16.49■□□□□ 0.23
CPNE6-210ENST00000558995 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
CPNE6-210ENST00000558995 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
CPNE6-210ENST00000558995 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
CPNE6-210ENST00000558995 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
CPNE6-210ENST00000558995 APBB1O00213 710 aa16.48■□□□□ 0.23
CPNE6-210ENST00000558995 ARHGEF25Q86VW2 580 aa16.48■□□□□ 0.23
CPNE6-210ENST00000558995 STK31Q9BXU1 1019 aa16.48■□□□□ 0.23
CPNE6-210ENST00000558995 F6X3S4 739 aa16.47■□□□□ 0.23
CPNE6-210ENST00000558995 ATF3P18847 181 aa16.47■□□□□ 0.23
CPNE6-210ENST00000558995 MRE11P49959 708 aa16.47■□□□□ 0.23
CPNE6-210ENST00000558995 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
CPNE6-210ENST00000558995 OSBPL3Q9H4L5 887 aa16.47■□□□□ 0.23
CPNE6-210ENST00000558995 GNAI2P04899 355 aa16.46■□□□□ 0.23
CPNE6-210ENST00000558995 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
CPNE6-210ENST00000558995 STRCP1A6NGW2 1772 aa16.46■□□□□ 0.23
CPNE6-210ENST00000558995 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
CPNE6-210ENST00000558995 CLEC17AQ6ZS10 378 aa16.46■□□□□ 0.23
CPNE6-210ENST00000558995 AXIN2Q9Y2T1 843 aa16.46■□□□□ 0.23
CPNE6-210ENST00000558995 REC8O95072 547 aa16.45■□□□□ 0.22
CPNE6-210ENST00000558995 MST1RQ04912 1400 aa16.45■□□□□ 0.22
CPNE6-210ENST00000558995 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
CPNE6-210ENST00000558995 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
CPNE6-210ENST00000558995 GNAI3P08754 354 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 PDE1AP54750 535 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 FLIIQ13045 1269 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 SSFA2P28290 1259 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 TRPM3Q9HCF6 1732 aaPredicted RBP16.43■□□□□ 0.22
CPNE6-210ENST00000558995 SLIT3O75094 1523 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 ERC2O15083 957 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 ANKRD24Q8TF21 1146 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 CHMP4AQ9BY43 222 aa16.43■□□□□ 0.22
CPNE6-210ENST00000558995 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
CPNE6-210ENST00000558995 PANK2Q9BZ23 570 aa16.42■□□□□ 0.22
CPNE6-210ENST00000558995 GRPEL1Q9HAV7 217 aa16.42■□□□□ 0.22
CPNE6-210ENST00000558995 LGR6Q9HBX8 967 aa16.42■□□□□ 0.22
CPNE6-210ENST00000558995 RGPD2P0DJD1 1756 aa16.42■□□□□ 0.22
CPNE6-210ENST00000558995 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
CPNE6-210ENST00000558995 ST18O60284 1047 aa16.41■□□□□ 0.22
CPNE6-210ENST00000558995 NUCB2P80303 420 aa16.41■□□□□ 0.22
CPNE6-210ENST00000558995 TAF7Q15545 349 aaPredicted RBP16.41■□□□□ 0.22
CPNE6-210ENST00000558995 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
CPNE6-210ENST00000558995 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
CPNE6-210ENST00000558995 CABLES1Q8TDN4 633 aa16.4■□□□□ 0.22
CPNE6-210ENST00000558995 RRAGDQ9NQL2 400 aaPredicted RBP16.4■□□□□ 0.22
CPNE6-210ENST00000558995 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
CPNE6-210ENST00000558995 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
CPNE6-210ENST00000558995 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
CPNE6-210ENST00000558995 KDM4FA0A1W2PPD8 638 aa16.39■□□□□ 0.21
CPNE6-210ENST00000558995 BAG4O95429 457 aaKnown RBP16.39■□□□□ 0.21
CPNE6-210ENST00000558995 IPO4Q8TEX9 1081 aaKnown RBP16.39■□□□□ 0.21
CPNE6-210ENST00000558995 EXOC6BQ9Y2D4 811 aa16.39■□□□□ 0.21
CPNE6-210ENST00000558995 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
CPNE6-210ENST00000558995 KIF1AQ12756 1690 aa16.39■□□□□ 0.21
CPNE6-210ENST00000558995 PHRF1Q9P1Y6 1649 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms