RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PLPP7Q8NBV4 271 aa8.11□□□□□ -1.11
CASC4-206ENST00000558847 ARHGEF15O94989 841 aa8.1□□□□□ -1.11
CASC4-206ENST00000558847 TRIM22Q8IYM9 498 aa8.1□□□□□ -1.11
CASC4-206ENST00000558847 ZNF837Q96EG3 531 aaPredicted RBP8.1□□□□□ -1.11
CASC4-206ENST00000558847 SCARF2Q96GP6 870 aaPredicted RBP8.1□□□□□ -1.11
CASC4-206ENST00000558847 OSBPL3Q9H4L5 887 aa8.1□□□□□ -1.11
CASC4-206ENST00000558847 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
CASC4-206ENST00000558847 H7C1W4 665 aa8.09□□□□□ -1.11
CASC4-206ENST00000558847 PPP1R15AO75807 674 aaPredicted RBP8.09□□□□□ -1.11
CASC4-206ENST00000558847 PDIA4P13667 645 aaKnown RBP8.09□□□□□ -1.11
CASC4-206ENST00000558847 GAS6Q14393 721 aa8.09□□□□□ -1.11
CASC4-206ENST00000558847 GMCL1Q96IK5 515 aa8.09□□□□□ -1.11
CASC4-206ENST00000558847 MBIPQ9NS73 344 aa8.09□□□□□ -1.11
CASC4-206ENST00000558847 USP17L5A8MUK1 530 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 CELA2BP08218 269 aaPredicted RBP8.08□□□□□ -1.12
CASC4-206ENST00000558847 PDE4CQ08493 712 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 DBN1Q16643 649 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 MAP7D1Q3KQU3 841 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 TBC1D9Q6ZT07 1266 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
CASC4-206ENST00000558847 TRERF1Q96PN7 1200 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 ARHGEF10LQ9HCE6 1279 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
CASC4-206ENST00000558847 SKIP12755 728 aa8.07□□□□□ -1.12
CASC4-206ENST00000558847 CLN3Q13286 438 aa8.07□□□□□ -1.12
CASC4-206ENST00000558847 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
CASC4-206ENST00000558847 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
CASC4-206ENST00000558847 ATP9BO43861 1147 aa8.06□□□□□ -1.12
CASC4-206ENST00000558847 SUZ12Q15022 739 aaKnown RBP8.06□□□□□ -1.12
CASC4-206ENST00000558847 GPAT2Q6NUI2 795 aa8.06□□□□□ -1.12
CASC4-206ENST00000558847 KANK3Q6NY19 840 aa8.06□□□□□ -1.12
CASC4-206ENST00000558847 NBPF10Q6P3W6 841 aaKnown RBP8.06□□□□□ -1.12
CASC4-206ENST00000558847 PLEKHM2Q8IWE5 1019 aa8.06□□□□□ -1.12
CASC4-206ENST00000558847 NBPF15Q8N660 670 aa8.06□□□□□ -1.12
CASC4-206ENST00000558847 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
CASC4-206ENST00000558847 IGF1RP08069 1367 aa8.06□□□□□ -1.12
CASC4-206ENST00000558847 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 MYCP01106 439 aaPredicted RBP8.05□□□□□ -1.12
CASC4-206ENST00000558847 NCOA4Q13772 614 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 TAS1R3Q7RTX0 852 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 NEDD1Q8NHV4 660 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 GRIP2Q9C0E4 1043 aa8.05□□□□□ -1.12
CASC4-206ENST00000558847 DNMT3AQ9Y6K1 912 aaPredicted RBP8.05□□□□□ -1.12
CASC4-206ENST00000558847 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
CASC4-206ENST00000558847 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
CASC4-206ENST00000558847 PPP1R12CQ9BZL4 782 aa8.04□□□□□ -1.12
CASC4-206ENST00000558847 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
CASC4-206ENST00000558847 PALM3A6NDB9 673 aaPredicted RBP8.03□□□□□ -1.12
CASC4-206ENST00000558847 WASLO00401 505 aaPredicted RBP8.03□□□□□ -1.12
CASC4-206ENST00000558847 MX2P20592 715 aa8.03□□□□□ -1.12
CASC4-206ENST00000558847 GTF2E1P29083 439 aaPredicted RBP8.03□□□□□ -1.12
CASC4-206ENST00000558847 USP4Q13107 963 aa8.03□□□□□ -1.12
CASC4-206ENST00000558847 PODNQ7Z5L7 613 aa8.03□□□□□ -1.12
CASC4-206ENST00000558847 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
CASC4-206ENST00000558847 NSFL1CQ9UNZ2 370 aaKnown RBP8.03□□□□□ -1.12
CASC4-206ENST00000558847 SPATA31C2B4DYI2 1134 aa8.02□□□□□ -1.13
CASC4-206ENST00000558847 LZTS3O60299 673 aaPredicted RBP8.02□□□□□ -1.13
CASC4-206ENST00000558847 F11P03951 625 aa8.02□□□□□ -1.13
CASC4-206ENST00000558847 BCRP11274 1271 aa8.02□□□□□ -1.13
CASC4-206ENST00000558847 EML3Q32P44 896 aa8.02□□□□□ -1.13
CASC4-206ENST00000558847 CFAP70Q5T0N1 1121 aa8.02□□□□□ -1.13
CASC4-206ENST00000558847 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
CASC4-206ENST00000558847 GPAMQ9HCL2 828 aa8.02□□□□□ -1.13
CASC4-206ENST00000558847 TFIP11Q9UBB9 837 aaKnown RBP8.02□□□□□ -1.13
CASC4-206ENST00000558847 PHF20L1A8MW92 1017 aa8.01□□□□□ -1.13
CASC4-206ENST00000558847 GNRH1P01148 92 aa8.01□□□□□ -1.13
CASC4-206ENST00000558847 PHKA2P46019 1235 aa8.01□□□□□ -1.13
CASC4-206ENST00000558847 WDR44Q5JSH3 913 aa8.01□□□□□ -1.13
CASC4-206ENST00000558847 SIRT1Q96EB6 747 aa8.01□□□□□ -1.13
CASC4-206ENST00000558847 PCDHGA11Q9Y5H2 935 aa8.01□□□□□ -1.13
CASC4-206ENST00000558847 ZBTB7CA1YPR0 619 aa8□□□□□ -1.13
CASC4-206ENST00000558847 STAU1O95793 577 aaKnown RBP8□□□□□ -1.13
CASC4-206ENST00000558847 IL2RAP01589 272 aa8□□□□□ -1.13
CASC4-206ENST00000558847 SCNN1DP51172 638 aa8□□□□□ -1.13
CASC4-206ENST00000558847 CENPCQ03188 943 aa8□□□□□ -1.13
CASC4-206ENST00000558847 TMEM214Q6NUQ4 689 aaKnown RBP8□□□□□ -1.13
CASC4-206ENST00000558847 BEND7Q8N7W2 519 aaPredicted RBP8□□□□□ -1.13
CASC4-206ENST00000558847 ZSCAN10Q96SZ4 725 aaPredicted RBP8□□□□□ -1.13
CASC4-206ENST00000558847 ESYT1Q9BSJ8 1104 aa8□□□□□ -1.13
CASC4-206ENST00000558847 CNTNAP5Q8WYK1 1306 aa8□□□□□ -1.13
CASC4-206ENST00000558847 IGHA1P01876 353 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 GTF2IP78347 998 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 FOXK2Q01167 660 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 GNASQ5JWF2 1037 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 ACDQ96AP0 544 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 PBXIP1Q96AQ6 731 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 TRAIPQ9BWF2 469 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 ETNK1Q9HBU6 452 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 NOD1Q9Y239 953 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 HRH3Q9Y5N1 445 aa7.99□□□□□ -1.13
CASC4-206ENST00000558847 CLDN10P78369 228 aa7.98□□□□□ -1.13
CASC4-206ENST00000558847 KIAA1024Q9UPX6 916 aa7.98□□□□□ -1.13
CASC4-206ENST00000558847 CSB-PGBD3P0DP91 1061 aa7.97□□□□□ -1.13
CASC4-206ENST00000558847 ESCO1Q5FWF5 840 aa7.97□□□□□ -1.13
CASC4-206ENST00000558847 PGBD3Q8N328 593 aa7.97□□□□□ -1.13
CASC4-206ENST00000558847 PHF24Q9UPV7 400 aa7.97□□□□□ -1.13
CASC4-206ENST00000558847 LOC100996750A0A140TA64 210 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms