RNA–Protein interactions for RNA: ENST00000558455.1

TMOD3-203, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-203ENST00000558455 SLC52A2Q9HAB3 445 aa27.88■■■□□ 2.05
TMOD3-203ENST00000558455 CASZ1Q86V15 1759 aa27.88■■■□□ 2.05
TMOD3-203ENST00000558455 LRP5O75197 1615 aa27.88■■■□□ 2.05
TMOD3-203ENST00000558455 GNAT3A8MTJ3 354 aa27.87■■■□□ 2.05
TMOD3-203ENST00000558455 C5P01031 1676 aa27.87■■■□□ 2.05
TMOD3-203ENST00000558455 TFCP2L1Q9NZI6 479 aa27.84■■■□□ 2.05
TMOD3-203ENST00000558455 IL17REQ8NFR9 667 aa27.83■■■□□ 2.05
TMOD3-203ENST00000558455 VIRMAQ69YN4 1812 aaKnown RBP27.83■■■□□ 2.05
TMOD3-203ENST00000558455 TAF1LQ8IZX4 1826 aa27.83■■■□□ 2.05
TMOD3-203ENST00000558455 ATP6V1AP38606 617 aa27.82■■■□□ 2.04
TMOD3-203ENST00000558455 ITPK1Q13572 414 aa27.82■■■□□ 2.04
TMOD3-203ENST00000558455 PLEKHF1Q96S99 279 aa27.82■■■□□ 2.04
TMOD3-203ENST00000558455 RBM42Q9BTD8 480 aaKnown RBP27.82■■■□□ 2.04
TMOD3-203ENST00000558455 HMGB2P26583 209 aaKnown RBP27.81■■■□□ 2.04
TMOD3-203ENST00000558455 LINC00116Q8NCU8 138 aa27.81■■■□□ 2.04
TMOD3-203ENST00000558455 SLC4A9Q96Q91 983 aa27.81■■■□□ 2.04
TMOD3-203ENST00000558455 PNPLA7Q6ZV29 1317 aa27.81■■■□□ 2.04
TMOD3-203ENST00000558455 ZBTB7AO95365 584 aa27.8■■■□□ 2.04
TMOD3-203ENST00000558455 NEFMP07197 916 aa27.8■■■□□ 2.04
TMOD3-203ENST00000558455 C4BP0C0L5 1744 aa27.8■■■□□ 2.04
TMOD3-203ENST00000558455 TUBGCP6Q96RT7 1819 aa27.8■■■□□ 2.04
TMOD3-203ENST00000558455 QSER1Q2KHR3 1735 aa27.79■■■□□ 2.04
TMOD3-203ENST00000558455 CEMIPQ8WUJ3 1361 aa27.79■■■□□ 2.04
TMOD3-203ENST00000558455 PTCD1O75127 700 aaKnown RBP27.79■■■□□ 2.04
TMOD3-203ENST00000558455 TEFQ10587 303 aa27.78■■■□□ 2.04
TMOD3-203ENST00000558455 PNNQ9H307 717 aaKnown RBP27.78■■■□□ 2.04
TMOD3-203ENST00000558455 SPON1Q9HCB6 807 aa27.78■■■□□ 2.04
TMOD3-203ENST00000558455 ZNF831Q5JPB2 1677 aa27.76■■■□□ 2.03
TMOD3-203ENST00000558455 SLC39A6Q13433 755 aa27.76■■■□□ 2.03
TMOD3-203ENST00000558455 AK7Q96M32 723 aa27.76■■■□□ 2.03
TMOD3-203ENST00000558455 MAPK8IP3Q9UPT6 1336 aa27.75■■■□□ 2.03
TMOD3-203ENST00000558455 WDR43Q15061 677 aaKnown RBP eCLIP27.75■■■□□ 2.03
TMOD3-203ENST00000558455 RTF1Q92541 710 aaKnown RBP27.75■■■□□ 2.03
TMOD3-203ENST00000558455 MCM10Q7L590 875 aa27.74■■■□□ 2.03
TMOD3-203ENST00000558455 MTFR1LQ9H019 292 aa27.74■■■□□ 2.03
TMOD3-203ENST00000558455 NFE2L2Q16236 605 aa27.73■■■□□ 2.03
TMOD3-203ENST00000558455 AMIGO3Q86WK7 504 aa27.73■■■□□ 2.03
TMOD3-203ENST00000558455 ATF5Q9Y2D1 282 aaPredicted RBP27.73■■■□□ 2.03
TMOD3-203ENST00000558455 KCPQ6ZWJ8 1503 aa27.72■■■□□ 2.03
TMOD3-203ENST00000558455 HTATSF1O43719 755 aaKnown RBP27.72■■■□□ 2.03
TMOD3-203ENST00000558455 DCTN1Q14203 1278 aa27.72■■■□□ 2.03
TMOD3-203ENST00000558455 SIPA1L3O60292 1781 aaPredicted RBP27.72■■■□□ 2.03
TMOD3-203ENST00000558455 ANP32CO43423 234 aa27.71■■■□□ 2.03
TMOD3-203ENST00000558455 COL23A1Q86Y22 540 aaPredicted RBP27.71■■■□□ 2.03
TMOD3-203ENST00000558455 GNPATO15228 680 aa27.7■■■□□ 2.02
TMOD3-203ENST00000558455 COL5A3P25940 1745 aaPredicted RBP27.7■■■□□ 2.02
TMOD3-203ENST00000558455 MSH5O43196 834 aa27.69■■■□□ 2.02
TMOD3-203ENST00000558455 PTGER2P43116 358 aa27.69■■■□□ 2.02
TMOD3-203ENST00000558455 SMIM5Q71RC9 77 aa27.69■■■□□ 2.02
TMOD3-203ENST00000558455 SLC16A10Q8TF71 515 aa27.69■■■□□ 2.02
TMOD3-203ENST00000558455 ADAMTS8Q9UP79 889 aa27.69■■■□□ 2.02
TMOD3-203ENST00000558455 UBR3Q6ZT12 1888 aa27.69■■■□□ 2.02
TMOD3-203ENST00000558455 CICQ96RK0 1608 aaPredicted RBP27.69■■■□□ 2.02
TMOD3-203ENST00000558455 TJP1Q07157 1748 aa27.69■■■□□ 2.02
TMOD3-203ENST00000558455 PHF14O94880 888 aa27.68■■■□□ 2.02
TMOD3-203ENST00000558455 CCDC146Q8IYE0 955 aa27.68■■■□□ 2.02
TMOD3-203ENST00000558455 TTC5Q8N0Z6 440 aa27.68■■■□□ 2.02
TMOD3-203ENST00000558455 FLAD1Q8NFF5 587 aa27.68■■■□□ 2.02
TMOD3-203ENST00000558455 CNTNAP4Q9C0A0 1308 aa27.67■■■□□ 2.02
TMOD3-203ENST00000558455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.67■■■□□ 2.02
TMOD3-203ENST00000558455 ZNF790Q6PG37 636 aa27.67■■■□□ 2.02
TMOD3-203ENST00000558455 UBR2Q8IWV8 1755 aa27.67■■■□□ 2.02
TMOD3-203ENST00000558455 SSFA2P28290 1259 aa27.66■■■□□ 2.02
TMOD3-203ENST00000558455 CCDC184Q52MB2 194 aa27.66■■■□□ 2.02
TMOD3-203ENST00000558455 RC3H1Q5TC82 1133 aaKnown RBP27.66■■■□□ 2.02
TMOD3-203ENST00000558455 DLG5Q8TDM6 1919 aa27.66■■■□□ 2.02
TMOD3-203ENST00000558455 BTBD11A6QL63 1104 aa27.65■■■□□ 2.02
TMOD3-203ENST00000558455 DNAJC10Q8IXB1 793 aa27.65■■■□□ 2.02
TMOD3-203ENST00000558455 SGIP1Q9BQI5 828 aa27.65■■■□□ 2.02
TMOD3-203ENST00000558455 PPP1R1BQ9UD71 204 aaPredicted RBP27.65■■■□□ 2.02
TMOD3-203ENST00000558455 CRKLP46109 303 aaKnown RBP27.64■■■□□ 2.02
TMOD3-203ENST00000558455 RUNDC1Q96C34 613 aa27.63■■■□□ 2.01
TMOD3-203ENST00000558455 ZNF496Q96IT1 587 aaPredicted RBP27.63■■■□□ 2.01
TMOD3-203ENST00000558455 KCNQ3O43525 872 aa27.62■■■□□ 2.01
TMOD3-203ENST00000558455 TMPOP42166 694 aaKnown RBP27.62■■■□□ 2.01
TMOD3-203ENST00000558455 VSIG10Q8N0Z9 540 aa27.62■■■□□ 2.01
TMOD3-203ENST00000558455 THUMPD2Q9BTF0 503 aaKnown RBP27.62■■■□□ 2.01
TMOD3-203ENST00000558455 RTCBQ9Y3I0 505 aaKnown RBP27.62■■■□□ 2.01
TMOD3-203ENST00000558455 RIPK4P57078 832 aa27.61■■■□□ 2.01
TMOD3-203ENST00000558455 HEG1Q9ULI3 1381 aa27.6■■■□□ 2.01
TMOD3-203ENST00000558455 MYH14Q7Z406 1995 aaKnown RBP27.6■■■□□ 2.01
TMOD3-203ENST00000558455 RRP7AQ9Y3A4 280 aaKnown RBP27.6■■■□□ 2.01
TMOD3-203ENST00000558455 RPS6KA4O75676 772 aa27.59■■■□□ 2.01
TMOD3-203ENST00000558455 CYP19A1P11511 503 aaPredicted RBP27.59■■■□□ 2.01
TMOD3-203ENST00000558455 TAF7Q15545 349 aaPredicted RBP27.59■■■□□ 2.01
TMOD3-203ENST00000558455 MSL1Q68DK7 614 aa27.59■■■□□ 2.01
TMOD3-203ENST00000558455 INTS5Q6P9B9 1019 aaKnown RBP27.59■■■□□ 2.01
TMOD3-203ENST00000558455 FMNL2Q96PY5 1086 aa27.59■■■□□ 2.01
TMOD3-203ENST00000558455 COL24A1Q17RW2 1714 aa27.58■■■□□ 2.01
TMOD3-203ENST00000558455 MRS2Q9HD23 443 aa27.57■■■□□ 2
TMOD3-203ENST00000558455 CCDC87Q9NVE4 849 aa27.57■■■□□ 2
TMOD3-203ENST00000558455 ADRA2BP18089 450 aa27.56■■■□□ 2
TMOD3-203ENST00000558455 POLD1P28340 1107 aa27.56■■■□□ 2
TMOD3-203ENST00000558455 LMOD3Q0VAK6 560 aa27.56■■■□□ 2
TMOD3-203ENST00000558455 NEUROD2Q15784 382 aa27.56■■■□□ 2
TMOD3-203ENST00000558455 TRAPPC3LQ5T215 181 aa27.56■■■□□ 2
TMOD3-203ENST00000558455 MIS18AQ9NYP9 233 aa27.56■■■□□ 2
TMOD3-203ENST00000558455 ARXQ96QS3 562 aa27.55■■■□□ 2
TMOD3-203ENST00000558455 ARHGEF1Q92888 912 aaKnown RBP27.54■■■□□ 2
TMOD3-203ENST00000558455 STARD3NLO95772 234 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms