RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 PIGBQ92521 554 aa11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 TUBGCP6Q96RT7 1819 aa11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 KDRP35968 1356 aa11.92□□□□□ -0.5
SNRPA1-206ENST00000558059 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
SNRPA1-206ENST00000558059 TAF1LQ8IZX4 1826 aa11.91□□□□□ -0.5
SNRPA1-206ENST00000558059 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
SNRPA1-206ENST00000558059 PTGER2P43116 358 aa11.9□□□□□ -0.5
SNRPA1-206ENST00000558059 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
SNRPA1-206ENST00000558059 SMARCC1Q92922 1105 aaPredicted RBP11.9□□□□□ -0.5
SNRPA1-206ENST00000558059 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
SNRPA1-206ENST00000558059 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-206ENST00000558059 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
SNRPA1-206ENST00000558059 MTFR1LQ9H019 292 aa11.89□□□□□ -0.51
SNRPA1-206ENST00000558059 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
SNRPA1-206ENST00000558059 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 ERVV-2B6SEH9 535 aa11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-206ENST00000558059 C5P01031 1676 aa11.87□□□□□ -0.51
SNRPA1-206ENST00000558059 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-206ENST00000558059 HMOX1P09601 288 aa11.87□□□□□ -0.51
SNRPA1-206ENST00000558059 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
SNRPA1-206ENST00000558059 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
SNRPA1-206ENST00000558059 PPP1R1BQ9UD71 204 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-206ENST00000558059 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
SNRPA1-206ENST00000558059 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
SNRPA1-206ENST00000558059 SIK1P57059 783 aa11.86□□□□□ -0.51
SNRPA1-206ENST00000558059 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
SNRPA1-206ENST00000558059 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
SNRPA1-206ENST00000558059 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-206ENST00000558059 C1orf141Q5JVX7 400 aa11.85□□□□□ -0.51
SNRPA1-206ENST00000558059 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
SNRPA1-206ENST00000558059 VIRMAQ69YN4 1812 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-206ENST00000558059 C4BP0C0L5 1744 aa11.85□□□□□ -0.51
SNRPA1-206ENST00000558059 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
SNRPA1-206ENST00000558059 ITPK1Q13572 414 aa11.84□□□□□ -0.51
SNRPA1-206ENST00000558059 UBR3Q6ZT12 1888 aa11.84□□□□□ -0.51
SNRPA1-206ENST00000558059 CABP4P57796 275 aa11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 MTHFSDQ2M296 383 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 ARXQ96QS3 562 aa11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 LGR6Q9HBX8 967 aa11.83□□□□□ -0.52
SNRPA1-206ENST00000558059 U2SURPO15042 1029 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-206ENST00000558059 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
SNRPA1-206ENST00000558059 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
SNRPA1-206ENST00000558059 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 AK7Q96M32 723 aa11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 SYT17Q9BSW7 474 aa11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-206ENST00000558059 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
SNRPA1-206ENST00000558059 POLD1P28340 1107 aa11.79□□□□□ -0.52
SNRPA1-206ENST00000558059 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
SNRPA1-206ENST00000558059 SLC52A2Q9HAB3 445 aa11.79□□□□□ -0.52
SNRPA1-206ENST00000558059 COL5A3P25940 1745 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-206ENST00000558059 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
SNRPA1-206ENST00000558059 MRC1P22897 1456 aa11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 SSFA2P28290 1259 aa11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 NUDCQ9Y266 331 aa11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 UTRNP46939 3433 aa11.78□□□□□ -0.52
SNRPA1-206ENST00000558059 GNPATO15228 680 aa11.77□□□□□ -0.53
SNRPA1-206ENST00000558059 PHF14O94880 888 aa11.77□□□□□ -0.53
SNRPA1-206ENST00000558059 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-206ENST00000558059 IL17REQ8NFR9 667 aa11.77□□□□□ -0.53
SNRPA1-206ENST00000558059 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.53
SNRPA1-206ENST00000558059 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-206ENST00000558059 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-206ENST00000558059 PRKAR2BP31323 418 aa11.76□□□□□ -0.53
SNRPA1-206ENST00000558059 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNRPA1-206ENST00000558059 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-206ENST00000558059 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
SNRPA1-206ENST00000558059 CNTNAP4Q9C0A0 1308 aa11.76□□□□□ -0.53
SNRPA1-206ENST00000558059 TJP1Q07157 1748 aa11.75□□□□□ -0.53
SNRPA1-206ENST00000558059 GNAT3A8MTJ3 354 aa11.75□□□□□ -0.53
SNRPA1-206ENST00000558059 FCHSD2O94868 740 aa11.75□□□□□ -0.53
SNRPA1-206ENST00000558059 RTCBQ9Y3I0 505 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-206ENST00000558059 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-206ENST00000558059 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-206ENST00000558059 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms