RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 MAPK8IP3Q9UPT6 1336 aa16.22■□□□□ 0.19
RCCD1-209ENST00000557750 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
RCCD1-209ENST00000557750 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.19
RCCD1-209ENST00000557750 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
RCCD1-209ENST00000557750 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.19
RCCD1-209ENST00000557750 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
RCCD1-209ENST00000557750 POLD1P28340 1107 aa16.21■□□□□ 0.18
RCCD1-209ENST00000557750 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.18
RCCD1-209ENST00000557750 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.18
RCCD1-209ENST00000557750 PKD1L3Q7Z443 1732 aa16.2■□□□□ 0.18
RCCD1-209ENST00000557750 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
RCCD1-209ENST00000557750 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
RCCD1-209ENST00000557750 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
RCCD1-209ENST00000557750 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
RCCD1-209ENST00000557750 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
RCCD1-209ENST00000557750 NKX1-1Q15270 411 aaPredicted RBP16.18■□□□□ 0.18
RCCD1-209ENST00000557750 QSER1Q2KHR3 1735 aa16.18■□□□□ 0.18
RCCD1-209ENST00000557750 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
RCCD1-209ENST00000557750 NLGN2Q8NFZ4 835 aa16.18■□□□□ 0.18
RCCD1-209ENST00000557750 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
RCCD1-209ENST00000557750 SHANK3Q9BYB0 1731 aa16.18■□□□□ 0.18
RCCD1-209ENST00000557750 MPRIPQ6WCQ1 1025 aa16.17■□□□□ 0.18
RCCD1-209ENST00000557750 DCAF5Q96JK2 942 aa16.17■□□□□ 0.18
RCCD1-209ENST00000557750 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
RCCD1-209ENST00000557750 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
RCCD1-209ENST00000557750 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
RCCD1-209ENST00000557750 NFE2L2Q16236 605 aa16.14■□□□□ 0.18
RCCD1-209ENST00000557750 CCNL1Q9UK58 526 aaPredicted RBP16.14■□□□□ 0.18
RCCD1-209ENST00000557750 DOT1LQ8TEK3 1739 aa16.14■□□□□ 0.17
RCCD1-209ENST00000557750 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
RCCD1-209ENST00000557750 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
RCCD1-209ENST00000557750 LY75O60449 1722 aa16.13■□□□□ 0.17
RCCD1-209ENST00000557750 MSH5O43196 834 aa16.13■□□□□ 0.17
RCCD1-209ENST00000557750 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
RCCD1-209ENST00000557750 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
RCCD1-209ENST00000557750 COL23A1Q86Y22 540 aaPredicted RBP16.13■□□□□ 0.17
RCCD1-209ENST00000557750 LGR6Q9HBX8 967 aa16.13■□□□□ 0.17
RCCD1-209ENST00000557750 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
RCCD1-209ENST00000557750 ERVV-2B6SEH9 535 aa16.12■□□□□ 0.17
RCCD1-209ENST00000557750 RNMTO43148 476 aaKnown RBP16.12■□□□□ 0.17
RCCD1-209ENST00000557750 TMPOP42166 694 aaKnown RBP16.12■□□□□ 0.17
RCCD1-209ENST00000557750 TMOD3Q9NYL9 352 aa16.12■□□□□ 0.17
RCCD1-209ENST00000557750 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
RCCD1-209ENST00000557750 RIPK4P57078 832 aa16.11■□□□□ 0.17
RCCD1-209ENST00000557750 CABP4P57796 275 aa16.11■□□□□ 0.17
RCCD1-209ENST00000557750 APAF1O14727 1248 aa16.11■□□□□ 0.17
RCCD1-209ENST00000557750 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
RCCD1-209ENST00000557750 DCTN1Q14203 1278 aa16.1■□□□□ 0.17
RCCD1-209ENST00000557750 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
RCCD1-209ENST00000557750 MCM10Q7L590 875 aa16.1■□□□□ 0.17
RCCD1-209ENST00000557750 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
RCCD1-209ENST00000557750 HTATSF1O43719 755 aaKnown RBP16.09■□□□□ 0.17
RCCD1-209ENST00000557750 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
RCCD1-209ENST00000557750 NFATC2IPQ8NCF5 419 aa16.09■□□□□ 0.17
RCCD1-209ENST00000557750 PIGBQ92521 554 aa16.09■□□□□ 0.17
RCCD1-209ENST00000557750 LMOD3Q0VAK6 560 aa16.08■□□□□ 0.17
RCCD1-209ENST00000557750 TEFQ10587 303 aa16.08■□□□□ 0.17
RCCD1-209ENST00000557750 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.17
RCCD1-209ENST00000557750 TOGARAM1Q9Y4F4 1720 aa16.07■□□□□ 0.16
RCCD1-209ENST00000557750 CEMIPQ8WUJ3 1361 aa16.06■□□□□ 0.16
RCCD1-209ENST00000557750 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
RCCD1-209ENST00000557750 ASAP1Q9ULH1 1129 aa16.05■□□□□ 0.16
RCCD1-209ENST00000557750 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
RCCD1-209ENST00000557750 TRIM35Q9UPQ4 493 aa16.04■□□□□ 0.16
RCCD1-209ENST00000557750 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
RCCD1-209ENST00000557750 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
RCCD1-209ENST00000557750 MRC1P22897 1456 aa16.04■□□□□ 0.16
RCCD1-209ENST00000557750 ATG3Q9NT62 314 aa16.03■□□□□ 0.16
RCCD1-209ENST00000557750 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
RCCD1-209ENST00000557750 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
RCCD1-209ENST00000557750 FLAD1Q8NFF5 587 aa16.02■□□□□ 0.16
RCCD1-209ENST00000557750 C5P01031 1676 aa16.02■□□□□ 0.16
RCCD1-209ENST00000557750 ADAMTS7Q9UKP4 1686 aa16.02■□□□□ 0.16
RCCD1-209ENST00000557750 ATP10DQ9P241 1426 aa16.02■□□□□ 0.15
RCCD1-209ENST00000557750 SLC39A6Q13433 755 aa16.02■□□□□ 0.15
RCCD1-209ENST00000557750 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
RCCD1-209ENST00000557750 TAF7Q15545 349 aaPredicted RBP16.01■□□□□ 0.15
RCCD1-209ENST00000557750 AMIGO3Q86WK7 504 aa16.01■□□□□ 0.15
RCCD1-209ENST00000557750 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
RCCD1-209ENST00000557750 PTCD1O75127 700 aaKnown RBP16■□□□□ 0.15
RCCD1-209ENST00000557750 SMIM5Q71RC9 77 aa16■□□□□ 0.15
RCCD1-209ENST00000557750 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
RCCD1-209ENST00000557750 HMGB2P26583 209 aaKnown RBP15.99■□□□□ 0.15
RCCD1-209ENST00000557750 AK7Q96M32 723 aa15.99■□□□□ 0.15
RCCD1-209ENST00000557750 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
RCCD1-209ENST00000557750 ITGB4P16144 1822 aa15.99■□□□□ 0.15
RCCD1-209ENST00000557750 LOC102724428A0A0B4J2F2 783 aa15.99■□□□□ 0.15
RCCD1-209ENST00000557750 SIK1P57059 783 aa15.99■□□□□ 0.15
RCCD1-209ENST00000557750 CCDC27Q2M243 656 aa15.99■□□□□ 0.15
RCCD1-209ENST00000557750 ZNF790Q6PG37 636 aa15.99■□□□□ 0.15
RCCD1-209ENST00000557750 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
RCCD1-209ENST00000557750 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
RCCD1-209ENST00000557750 CALD1Q05682 793 aaKnown RBP15.98■□□□□ 0.15
RCCD1-209ENST00000557750 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
RCCD1-209ENST00000557750 DLG5Q8TDM6 1919 aa15.97■□□□□ 0.15
RCCD1-209ENST00000557750 PHF14O94880 888 aa15.97■□□□□ 0.15
RCCD1-209ENST00000557750 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
RCCD1-209ENST00000557750 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
RCCD1-209ENST00000557750 NGEFQ8N5V2 710 aa15.97■□□□□ 0.15
RCCD1-209ENST00000557750 GPBP1L1Q9HC44 474 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms