RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TSPY26PQ9H489 355 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 METP08581 1390 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 SALL3Q9BXA9 1300 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 EXOC6BQ9Y2D4 811 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 SPATA31D1Q6ZQQ2 1576 aa14.36□□□□□ -0.11
VIPAS39-211ENST00000557658 F6X3S4 739 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 MX1P20591 662 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 G2E3Q7L622 706 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 ANO2Q9NQ90 1003 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 PHF14O94880 888 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 RBM10P98175 930 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 RNF214Q8ND24 703 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 TSPYL4Q9UJ04 414 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
VIPAS39-211ENST00000557658 UQCRHLA0A096LP55 91 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 UQCRHP07919 91 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 CHMLP26374 656 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 PALD1Q9ULE6 856 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 GNAI3P08754 354 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 TSHZ3Q63HK5 1081 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 RTF1Q92541 710 aaKnown RBP14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 TTC21BQ7Z4L5 1316 aa14.34□□□□□ -0.11
VIPAS39-211ENST00000557658 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 RILPL2Q969X0 211 aa14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 IL17RAQ96F46 866 aa14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 STK31Q9BXU1 1019 aa14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 SRCIN1Q9C0H9 1055 aa14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 FAM13BQ9NYF5 915 aa14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 MIS18AQ9NYP9 233 aa14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 ARHGEF10O15013 1369 aa14.33□□□□□ -0.11
VIPAS39-211ENST00000557658 TECPR2O15040 1411 aa14.33□□□□□ -0.12
VIPAS39-211ENST00000557658 NOL8Q76FK4 1167 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-211ENST00000557658 PRR36Q9H6K5 1346 aa14.33□□□□□ -0.12
VIPAS39-211ENST00000557658 HSP90AB2PQ58FF8 381 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 SASS6Q6UVJ0 657 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 DYNC1I1O14576 645 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 ATP8B2P98198 1209 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 STAP2Q9UGK3 403 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 PEAK1Q9H792 1746 aa14.32□□□□□ -0.12
VIPAS39-211ENST00000557658 EPB41L2O43491 1005 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-211ENST00000557658 AGLP35573 1532 aa14.31□□□□□ -0.12
VIPAS39-211ENST00000557658 MTERF4Q7Z6M4 381 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-211ENST00000557658 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
VIPAS39-211ENST00000557658 NALCNQ8IZF0 1738 aa14.31□□□□□ -0.12
VIPAS39-211ENST00000557658 KIAA2012Q0VF49 1180 aa14.3□□□□□ -0.12
VIPAS39-211ENST00000557658 AOX1Q06278 1338 aa14.3□□□□□ -0.12
VIPAS39-211ENST00000557658 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 MTHFSDQ2M296 383 aaKnown RBP14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 UVSSAQ2YD98 709 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 USP48Q86UV5 1035 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 FOXO3O43524 673 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 FLIIQ13045 1269 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 FKBP5Q13451 457 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 ACEP12821 1306 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 TCHHQ07283 1943 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 CACNA1FO60840 1977 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 GADD45BO75293 160 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 HDGFP51858 240 aaKnown RBP14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 CCDC30Q5VVM6 783 aa14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.29□□□□□ -0.12
VIPAS39-211ENST00000557658 XRN1Q8IZH2 1706 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 USP31Q70CQ4 1352 aa14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 FMN2Q9NZ56 1722 aa14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 HSPA4P34932 840 aa14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 FOXD4L6Q3SYB3 417 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 FOXD4L3Q6VB84 417 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 TMEM87AQ8NBN3 555 aa14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
VIPAS39-211ENST00000557658 FAM208AQ9UK61 1670 aaKnown RBP14.27□□□□□ -0.12
VIPAS39-211ENST00000557658 PLEKHG3A1L390 1219 aa14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 PLEKHG5O94827 1062 aa14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 UNC5CLQ8IV45 518 aa14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 USP6P35125 1406 aa14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 LETM1O95202 739 aaPredicted RBP14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.13
VIPAS39-211ENST00000557658 RIMS1Q86UR5 1692 aaKnown RBP14.26□□□□□ -0.13
VIPAS39-211ENST00000557658 N4BP2Q86UW6 1770 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-211ENST00000557658 SOX12O15370 315 aa14.26□□□□□ -0.13
VIPAS39-211ENST00000557658 KDRP35968 1356 aa14.25□□□□□ -0.13
VIPAS39-211ENST00000557658 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
VIPAS39-211ENST00000557658 SOS1Q07889 1333 aaPredicted RBP14.25□□□□□ -0.13
VIPAS39-211ENST00000557658 PXDNLA1KZ92 1463 aa14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 FLT4P35916 1363 aa14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 RPAP1Q9BWH6 1393 aaPredicted RBP14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 ROBO2Q9HCK4 1378 aa14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 RAB11FIP3O75154 756 aa14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 UBTFL1P0CB47 393 aaPredicted RBP14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 ZSCAN22P10073 491 aaPredicted RBP14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 DNTTIP2Q5QJE6 756 aaKnown RBP14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 SBNO1A3KN83 1393 aa14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 RAD50Q92878 1312 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms