RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MIS18AQ9NYP9 233 aa20.03■□□□□ 0.8
NEDD1-213ENST00000557644 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
NEDD1-213ENST00000557644 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
NEDD1-213ENST00000557644 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
NEDD1-213ENST00000557644 APBA3O96018 575 aa20■□□□□ 0.79
NEDD1-213ENST00000557644 TAF7Q15545 349 aaPredicted RBP20■□□□□ 0.79
NEDD1-213ENST00000557644 ATG3Q9NT62 314 aa20■□□□□ 0.79
NEDD1-213ENST00000557644 BTBD11A6QL63 1104 aa20■□□□□ 0.79
NEDD1-213ENST00000557644 UPF1Q92900 1129 aaKnown RBP eCLIP20■□□□□ 0.79
NEDD1-213ENST00000557644 LAS1LQ9Y4W2 734 aaKnown RBP20■□□□□ 0.79
NEDD1-213ENST00000557644 BTAF1O14981 1849 aa19.99■□□□□ 0.79
NEDD1-213ENST00000557644 KCNQ3O43525 872 aa19.99■□□□□ 0.79
NEDD1-213ENST00000557644 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
NEDD1-213ENST00000557644 ZNF521Q96K83 1311 aa19.99■□□□□ 0.79
NEDD1-213ENST00000557644 SIPA1L3O60292 1781 aaPredicted RBP19.98■□□□□ 0.79
NEDD1-213ENST00000557644 TNS1Q9HBL0 1735 aaKnown RBP19.98■□□□□ 0.79
NEDD1-213ENST00000557644 DEFB132Q7Z7B7 95 aa19.97■□□□□ 0.79
NEDD1-213ENST00000557644 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
NEDD1-213ENST00000557644 SPINK5Q9NQ38 1064 aaPredicted RBP19.97■□□□□ 0.79
NEDD1-213ENST00000557644 SF3B2Q13435 895 aaKnown RBP19.96■□□□□ 0.79
NEDD1-213ENST00000557644 ZNF790Q6PG37 636 aa19.96■□□□□ 0.79
NEDD1-213ENST00000557644 PALLDQ8WX93 1383 aa19.96■□□□□ 0.79
NEDD1-213ENST00000557644 PTCD1O75127 700 aaKnown RBP19.95■□□□□ 0.78
NEDD1-213ENST00000557644 TSPYL4Q9UJ04 414 aa19.95■□□□□ 0.78
NEDD1-213ENST00000557644 WDR63Q8IWG1 891 aa19.95■□□□□ 0.78
NEDD1-213ENST00000557644 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
NEDD1-213ENST00000557644 CHL1O00533 1208 aa19.94■□□□□ 0.78
NEDD1-213ENST00000557644 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
NEDD1-213ENST00000557644 KCNQ4P56696 695 aa19.94■□□□□ 0.78
NEDD1-213ENST00000557644 CALD1Q05682 793 aaKnown RBP19.94■□□□□ 0.78
NEDD1-213ENST00000557644 EN1Q05925 392 aaPredicted RBP19.94■□□□□ 0.78
NEDD1-213ENST00000557644 CCDC125Q86Z20 511 aa19.93■□□□□ 0.78
NEDD1-213ENST00000557644 MBIPQ9NS73 344 aa19.93■□□□□ 0.78
NEDD1-213ENST00000557644 IFT57Q9NWB7 429 aa19.93■□□□□ 0.78
NEDD1-213ENST00000557644 PLSCR1O15162 318 aa19.93■□□□□ 0.78
NEDD1-213ENST00000557644 TTC5Q8N0Z6 440 aa19.93■□□□□ 0.78
NEDD1-213ENST00000557644 SMARCC1Q92922 1105 aaPredicted RBP19.93■□□□□ 0.78
NEDD1-213ENST00000557644 TSR2Q969E8 191 aaKnown RBP19.93■□□□□ 0.78
NEDD1-213ENST00000557644 RBM42Q9BTD8 480 aaKnown RBP19.93■□□□□ 0.78
NEDD1-213ENST00000557644 PROM2Q8N271 834 aa19.92■□□□□ 0.78
NEDD1-213ENST00000557644 CDCA7LQ96GN5 454 aa19.92■□□□□ 0.78
NEDD1-213ENST00000557644 ZNF496Q96IT1 587 aaPredicted RBP19.92■□□□□ 0.78
NEDD1-213ENST00000557644 SLC4A9Q96Q91 983 aa19.92■□□□□ 0.78
NEDD1-213ENST00000557644 PAPPAQ13219 1627 aa19.92■□□□□ 0.78
NEDD1-213ENST00000557644 GNAI1P63096 354 aa19.92■□□□□ 0.78
NEDD1-213ENST00000557644 BAG6P46379 1132 aa19.91■□□□□ 0.78
NEDD1-213ENST00000557644 EZH2Q15910 746 aaKnown RBP19.91■□□□□ 0.78
NEDD1-213ENST00000557644 IL16Q14005 1332 aa19.91■□□□□ 0.78
NEDD1-213ENST00000557644 LOC102724428A0A0B4J2F2 783 aa19.91■□□□□ 0.78
NEDD1-213ENST00000557644 SIK1P57059 783 aa19.91■□□□□ 0.78
NEDD1-213ENST00000557644 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
NEDD1-213ENST00000557644 CAMKK2Q96RR4 588 aa19.91■□□□□ 0.78
NEDD1-213ENST00000557644 KCPQ6ZWJ8 1503 aa19.91■□□□□ 0.78
NEDD1-213ENST00000557644 BABAM1Q9NWV8 329 aa19.9■□□□□ 0.78
NEDD1-213ENST00000557644 ZBED9Q6R2W3 1325 aa19.9■□□□□ 0.78
NEDD1-213ENST00000557644 KRT24Q2M2I5 525 aa19.9■□□□□ 0.78
NEDD1-213ENST00000557644 KDM3BQ7LBC6 1761 aa19.89■□□□□ 0.77
NEDD1-213ENST00000557644 EIF4A1P60842 406 aaKnown RBP19.89■□□□□ 0.77
NEDD1-213ENST00000557644 TXNRD1Q16881 649 aa19.89■□□□□ 0.77
NEDD1-213ENST00000557644 LRRC4BQ9NT99 713 aa19.89■□□□□ 0.77
NEDD1-213ENST00000557644 CCNL1Q9UK58 526 aaPredicted RBP19.88■□□□□ 0.77
NEDD1-213ENST00000557644 PRAMEF22A3QJZ6 481 aa19.88■□□□□ 0.77
NEDD1-213ENST00000557644 FMNL2Q96PY5 1086 aa19.88■□□□□ 0.77
NEDD1-213ENST00000557644 ATP6V1AP38606 617 aa19.87■□□□□ 0.77
NEDD1-213ENST00000557644 FANCIQ9NVI1 1328 aa19.87■□□□□ 0.77
NEDD1-213ENST00000557644 UBR2Q8IWV8 1755 aa19.87■□□□□ 0.77
NEDD1-213ENST00000557644 ITPK1Q13572 414 aa19.87■□□□□ 0.77
NEDD1-213ENST00000557644 LY75O60449 1722 aa19.86■□□□□ 0.77
NEDD1-213ENST00000557644 SLFN5Q08AF3 891 aa19.86■□□□□ 0.77
NEDD1-213ENST00000557644 HEG1Q9ULI3 1381 aa19.86■□□□□ 0.77
NEDD1-213ENST00000557644 E9PSI1 815 aa19.85■□□□□ 0.77
NEDD1-213ENST00000557644 DNAJC10Q8IXB1 793 aa19.85■□□□□ 0.77
NEDD1-213ENST00000557644 MYH16Q9H6N6 1097 aa19.84■□□□□ 0.77
NEDD1-213ENST00000557644 ELL2O00472 640 aaPredicted RBP19.84■□□□□ 0.77
NEDD1-213ENST00000557644 SLC27A3Q5K4L6 730 aa19.84■□□□□ 0.77
NEDD1-213ENST00000557644 GIGYF1O75420 1035 aaPredicted RBP19.83■□□□□ 0.77
NEDD1-213ENST00000557644 C8orf58Q8NAV2 365 aa19.83■□□□□ 0.77
NEDD1-213ENST00000557644 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.76
NEDD1-213ENST00000557644 TSPYL6Q8N831 410 aa19.83■□□□□ 0.76
NEDD1-213ENST00000557644 LINC00116Q8NCU8 138 aa19.83■□□□□ 0.76
NEDD1-213ENST00000557644 USP16Q9Y5T5 823 aa19.83■□□□□ 0.76
NEDD1-213ENST00000557644 RGPD3A6NKT7 1758 aaPredicted RBP19.82■□□□□ 0.76
NEDD1-213ENST00000557644 RGPD4Q7Z3J3 1758 aa19.82■□□□□ 0.76
NEDD1-213ENST00000557644 SNRPA1P09661 255 aaKnown RBP19.82■□□□□ 0.76
NEDD1-213ENST00000557644 SOCS7O14512 581 aa19.81■□□□□ 0.76
NEDD1-213ENST00000557644 DUSP27Q5VZP5 1158 aa19.81■□□□□ 0.76
NEDD1-213ENST00000557644 TRMT2AQ8IZ69 625 aaKnown RBP19.81■□□□□ 0.76
NEDD1-213ENST00000557644 EXOSC9Q06265 439 aaKnown RBP19.81■□□□□ 0.76
NEDD1-213ENST00000557644 TJP1Q07157 1748 aa19.8■□□□□ 0.76
NEDD1-213ENST00000557644 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
NEDD1-213ENST00000557644 C5P01031 1676 aa19.79■□□□□ 0.76
NEDD1-213ENST00000557644 NECTIN2Q92692 538 aa19.78■□□□□ 0.76
NEDD1-213ENST00000557644 EIF2S2P20042 333 aaKnown RBP19.78■□□□□ 0.76
NEDD1-213ENST00000557644 RREB1Q92766 1687 aa19.77■□□□□ 0.76
NEDD1-213ENST00000557644 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.76
NEDD1-213ENST00000557644 ZNF831Q5JPB2 1677 aa19.77■□□□□ 0.76
NEDD1-213ENST00000557644 CRKLP46109 303 aaKnown RBP19.77■□□□□ 0.75
NEDD1-213ENST00000557644 PIP4K2AP48426 406 aaPredicted RBP19.77■□□□□ 0.75
NEDD1-213ENST00000557644 TWISTNBQ3B726 338 aaPredicted RBP19.77■□□□□ 0.75
NEDD1-213ENST00000557644 STARD3NLO95772 234 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms