RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 LRRC4BQ9NT99 713 aa14.02□□□□□ -0.17
PRKCH-226ENST00000557585 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
PRKCH-226ENST00000557585 PLSCR1O15162 318 aa14□□□□□ -0.17
PRKCH-226ENST00000557585 TXNRD1Q16881 649 aa14□□□□□ -0.17
PRKCH-226ENST00000557585 BTAF1O14981 1849 aa13.99□□□□□ -0.17
PRKCH-226ENST00000557585 AMOTQ4VCS5 1084 aa13.99□□□□□ -0.17
PRKCH-226ENST00000557585 ASAP1Q9ULH1 1129 aa13.99□□□□□ -0.17
PRKCH-226ENST00000557585 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
PRKCH-226ENST00000557585 R3HDM1Q15032 1099 aaKnown RBP13.98□□□□□ -0.17
PRKCH-226ENST00000557585 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
PRKCH-226ENST00000557585 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
PRKCH-226ENST00000557585 C1orf141Q5JVX7 400 aa13.97□□□□□ -0.17
PRKCH-226ENST00000557585 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
PRKCH-226ENST00000557585 DCAF5Q96JK2 942 aa13.97□□□□□ -0.17
PRKCH-226ENST00000557585 PLEKHF1Q96S99 279 aa13.97□□□□□ -0.17
PRKCH-226ENST00000557585 NUP188Q5SRE5 1749 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 RREB1Q92766 1687 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
PRKCH-226ENST00000557585 FCHSD2O94868 740 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 AKAP4Q5JQC9 854 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 SMIM5Q71RC9 77 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 NFATC2IPQ8NCF5 419 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
PRKCH-226ENST00000557585 KAT6BQ8WYB5 2073 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 ATG3Q9NT62 314 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 TMOD3Q9NYL9 352 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 ADAMTS8Q9UP79 889 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 PALLDQ8WX93 1383 aa13.95□□□□□ -0.18
PRKCH-226ENST00000557585 CABP4P57796 275 aa13.94□□□□□ -0.18
PRKCH-226ENST00000557585 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
PRKCH-226ENST00000557585 MCM10Q7L590 875 aa13.94□□□□□ -0.18
PRKCH-226ENST00000557585 PLEKHG2Q9H7P9 1386 aa13.94□□□□□ -0.18
PRKCH-226ENST00000557585 ITGB4P16144 1822 aa13.93□□□□□ -0.18
PRKCH-226ENST00000557585 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
PRKCH-226ENST00000557585 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
PRKCH-226ENST00000557585 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
PRKCH-226ENST00000557585 RRP7AQ9Y3A4 280 aaKnown RBP13.93□□□□□ -0.18
PRKCH-226ENST00000557585 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
PRKCH-226ENST00000557585 ANP32CO43423 234 aa13.92□□□□□ -0.18
PRKCH-226ENST00000557585 ITPK1Q13572 414 aa13.92□□□□□ -0.18
PRKCH-226ENST00000557585 CCNL1Q9UK58 526 aaPredicted RBP13.92□□□□□ -0.18
PRKCH-226ENST00000557585 GNAT3A8MTJ3 354 aa13.91□□□□□ -0.18
PRKCH-226ENST00000557585 KCNQ3O43525 872 aa13.91□□□□□ -0.18
PRKCH-226ENST00000557585 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
PRKCH-226ENST00000557585 GAS2L2Q8NHY3 880 aa13.91□□□□□ -0.18
PRKCH-226ENST00000557585 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
PRKCH-226ENST00000557585 PTCD1O75127 700 aaKnown RBP13.9□□□□□ -0.18
PRKCH-226ENST00000557585 LINC00116Q8NCU8 138 aa13.9□□□□□ -0.18
PRKCH-226ENST00000557585 PAPPAQ13219 1627 aa13.9□□□□□ -0.19
PRKCH-226ENST00000557585 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
PRKCH-226ENST00000557585 SIK1P57059 783 aa13.89□□□□□ -0.19
PRKCH-226ENST00000557585 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
PRKCH-226ENST00000557585 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 ADAMTS7Q9UKP4 1686 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 MRC1P22897 1456 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
PRKCH-226ENST00000557585 WDR43Q15061 677 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRKCH-226ENST00000557585 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 NFE2L2Q16236 605 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 SLC15A2Q16348 729 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
PRKCH-226ENST00000557585 LY75O60449 1722 aa13.87□□□□□ -0.19
PRKCH-226ENST00000557585 CEMIPQ8WUJ3 1361 aa13.87□□□□□ -0.19
PRKCH-226ENST00000557585 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
PRKCH-226ENST00000557585 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
PRKCH-226ENST00000557585 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
PRKCH-226ENST00000557585 STK32BQ9NY57 414 aa13.87□□□□□ -0.19
PRKCH-226ENST00000557585 ATP6V1AP38606 617 aa13.86□□□□□ -0.19
PRKCH-226ENST00000557585 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
PRKCH-226ENST00000557585 SLC27A3Q5K4L6 730 aa13.86□□□□□ -0.19
PRKCH-226ENST00000557585 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
PRKCH-226ENST00000557585 RIPK4P57078 832 aa13.85□□□□□ -0.19
PRKCH-226ENST00000557585 PNPLA7Q6ZV29 1317 aa13.85□□□□□ -0.19
PRKCH-226ENST00000557585 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
PRKCH-226ENST00000557585 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 APAF1O14727 1248 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 ZBTB7AO95365 584 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 TEFQ10587 303 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 DNAJC10Q8IXB1 793 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 RUNDC1Q96C34 613 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 KCPQ6ZWJ8 1503 aa13.84□□□□□ -0.19
PRKCH-226ENST00000557585 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
PRKCH-226ENST00000557585 ZNF496Q96IT1 587 aaPredicted RBP13.83□□□□□ -0.2
PRKCH-226ENST00000557585 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.2
PRKCH-226ENST00000557585 PHF14O94880 888 aa13.82□□□□□ -0.2
PRKCH-226ENST00000557585 COL23A1Q86Y22 540 aaPredicted RBP13.82□□□□□ -0.2
PRKCH-226ENST00000557585 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
PRKCH-226ENST00000557585 HAX1O00165 279 aa13.81□□□□□ -0.2
PRKCH-226ENST00000557585 ZNF790Q6PG37 636 aa13.81□□□□□ -0.2
PRKCH-226ENST00000557585 FAM9BQ8IZU0 186 aa13.81□□□□□ -0.2
PRKCH-226ENST00000557585 C5P01031 1676 aa13.81□□□□□ -0.2
PRKCH-226ENST00000557585 VIRMAQ69YN4 1812 aaKnown RBP13.8□□□□□ -0.2
PRKCH-226ENST00000557585 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms