RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-223ENST00000557511 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
PSEN1-223ENST00000557511 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-223ENST00000557511 NUDCQ9Y266 331 aa11.19□□□□□ -0.62
PSEN1-223ENST00000557511 MAP2P11137 1827 aaKnown RBP11.19□□□□□ -0.62
PSEN1-223ENST00000557511 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
PSEN1-223ENST00000557511 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
PSEN1-223ENST00000557511 PLEKHO1Q53GL0 409 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-223ENST00000557511 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
PSEN1-223ENST00000557511 ACSBG1Q96GR2 724 aa11.18□□□□□ -0.62
PSEN1-223ENST00000557511 WNK3Q9BYP7 1800 aa11.18□□□□□ -0.62
PSEN1-223ENST00000557511 BCL9O00512 1426 aa11.18□□□□□ -0.62
PSEN1-223ENST00000557511 IGSF1Q8N6C5 1336 aa11.17□□□□□ -0.62
PSEN1-223ENST00000557511 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
PSEN1-223ENST00000557511 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
PSEN1-223ENST00000557511 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
PSEN1-223ENST00000557511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.626e-6■□□□□ 8.9
PSEN1-223ENST00000557511 MEGF6O75095 1541 aa11.16□□□□□ -0.62
PSEN1-223ENST00000557511 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
PSEN1-223ENST00000557511 EZH2Q15910 746 aaKnown RBP11.16□□□□□ -0.62
PSEN1-223ENST00000557511 SULT6B1Q6IMI4 303 aa11.16□□□□□ -0.62
PSEN1-223ENST00000557511 IFNL2Q8IZJ0 200 aa11.16□□□□□ -0.62
PSEN1-223ENST00000557511 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
PSEN1-223ENST00000557511 PLSCR1O15162 318 aa11.15□□□□□ -0.62
PSEN1-223ENST00000557511 RGL2O15211 777 aa11.15□□□□□ -0.62
PSEN1-223ENST00000557511 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
PSEN1-223ENST00000557511 IL13P35225 146 aa11.15□□□□□ -0.62
PSEN1-223ENST00000557511 RALBP1Q15311 655 aa11.15□□□□□ -0.62
PSEN1-223ENST00000557511 C1orf141Q5JVX7 400 aa11.15□□□□□ -0.62
PSEN1-223ENST00000557511 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-223ENST00000557511 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
PSEN1-223ENST00000557511 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-223ENST00000557511 NEFMP07197 916 aa11.14□□□□□ -0.63
PSEN1-223ENST00000557511 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
PSEN1-223ENST00000557511 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
PSEN1-223ENST00000557511 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
PSEN1-223ENST00000557511 CAMKK2Q96RR4 588 aa11.14□□□□□ -0.63
PSEN1-223ENST00000557511 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
PSEN1-223ENST00000557511 KCNQ2O43526 872 aa11.13□□□□□ -0.63
PSEN1-223ENST00000557511 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-223ENST00000557511 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
PSEN1-223ENST00000557511 HMOX1P09601 288 aa11.12□□□□□ -0.63
PSEN1-223ENST00000557511 RGPD2P0DJD1 1756 aa11.12□□□□□ -0.63
PSEN1-223ENST00000557511 CYP27B1O15528 508 aa11.11□□□□□ -0.63
PSEN1-223ENST00000557511 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-223ENST00000557511 C7P10643 843 aa11.11□□□□□ -0.63
PSEN1-223ENST00000557511 PHKG2P15735 406 aa11.11□□□□□ -0.63
PSEN1-223ENST00000557511 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
PSEN1-223ENST00000557511 AEBP1Q8IUX7 1158 aa11.11□□□□□ -0.63
PSEN1-223ENST00000557511 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
PSEN1-223ENST00000557511 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-223ENST00000557511 TXNRD1Q16881 649 aa11.1□□□□□ -0.63
PSEN1-223ENST00000557511 MPRIPQ6WCQ1 1025 aa11.1□□□□□ -0.63
PSEN1-223ENST00000557511 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-223ENST00000557511 DCAF5Q96JK2 942 aa11.1□□□□□ -0.63
PSEN1-223ENST00000557511 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
PSEN1-223ENST00000557511 STK32BQ9NY57 414 aa11.1□□□□□ -0.63
PSEN1-223ENST00000557511 TMOD3Q9NYL9 352 aa11.1□□□□□ -0.63
PSEN1-223ENST00000557511 TNS1Q9HBL0 1735 aaKnown RBP11.09□□□□□ -0.63
PSEN1-223ENST00000557511 KDRP35968 1356 aa11.09□□□□□ -0.63
PSEN1-223ENST00000557511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-223ENST00000557511 SEC24BO95487 1268 aa11.09□□□□□ -0.63
PSEN1-223ENST00000557511 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
PSEN1-223ENST00000557511 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
PSEN1-223ENST00000557511 ZFP91Q96JP5 570 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-223ENST00000557511 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
PSEN1-223ENST00000557511 MYBBP1AQ9BQG0 1328 aaKnown RBP11.09□□□□□ -0.63
PSEN1-223ENST00000557511 EP400Q96L91 3159 aa11.08□□□□□ -0.64
PSEN1-223ENST00000557511 NHSQ6T4R5 1651 aa11.08□□□□□ -0.64
PSEN1-223ENST00000557511 CABP4P57796 275 aa11.08□□□□□ -0.64
PSEN1-223ENST00000557511 R3HDM1Q15032 1099 aaKnown RBP11.08□□□□□ -0.64
PSEN1-223ENST00000557511 AKAP4Q5JQC9 854 aa11.08□□□□□ -0.64
PSEN1-223ENST00000557511 GAS2L2Q8NHY3 880 aa11.08□□□□□ -0.64
PSEN1-223ENST00000557511 PSDA5PKW4 1024 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-223ENST00000557511 ERVV-2B6SEH9 535 aa11.07□□□□□ -0.64
PSEN1-223ENST00000557511 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
PSEN1-223ENST00000557511 CCNL1Q9UK58 526 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-223ENST00000557511 STK25O00506 426 aa11.06□□□□□ -0.64
PSEN1-223ENST00000557511 FCHSD2O94868 740 aa11.06□□□□□ -0.64
PSEN1-223ENST00000557511 PRKAR2BP31323 418 aa11.06□□□□□ -0.64
PSEN1-223ENST00000557511 SBF2Q86WG5 1849 aa11.06□□□□□ -0.64
PSEN1-223ENST00000557511 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
PSEN1-223ENST00000557511 KAT6BQ8WYB5 2073 aa11.05□□□□□ -0.64
PSEN1-223ENST00000557511 ANP32CO43423 234 aa11.05□□□□□ -0.64
PSEN1-223ENST00000557511 WDR43Q15061 677 aaKnown RBP eCLIP11.05□□□□□ -0.64
PSEN1-223ENST00000557511 IER5LQ5T953 404 aa11.05□□□□□ -0.64
PSEN1-223ENST00000557511 PIGBQ92521 554 aa11.05□□□□□ -0.64
PSEN1-223ENST00000557511 RTF1Q92541 710 aaKnown RBP11.05□□□□□ -0.64
PSEN1-223ENST00000557511 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
PSEN1-223ENST00000557511 COL3A1P02461 1466 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-223ENST00000557511 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
PSEN1-223ENST00000557511 PALLDQ8WX93 1383 aa11.04□□□□□ -0.64
PSEN1-223ENST00000557511 DOT1LQ8TEK3 1739 aa11.04□□□□□ -0.64
PSEN1-223ENST00000557511 RGPD3A6NKT7 1758 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-223ENST00000557511 RGPD4Q7Z3J3 1758 aa11.04□□□□□ -0.64
PSEN1-223ENST00000557511 GNAT3A8MTJ3 354 aa11.04□□□□□ -0.64
PSEN1-223ENST00000557511 MTHFSDQ2M296 383 aaKnown RBP11.04□□□□□ -0.64
PSEN1-223ENST00000557511 TEFQ10587 303 aa11.03□□□□□ -0.64
PSEN1-223ENST00000557511 SLC15A2Q16348 729 aa11.03□□□□□ -0.64
PSEN1-223ENST00000557511 PRKRIP1Q9H875 184 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms