RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
MTHFD1-215ENST00000557370 COL3A1P02461 1466 aaPredicted RBP9.19□□□□□ -0.94
MTHFD1-215ENST00000557370 IGHDP01880 384 aa9.18□□□□□ -0.94
MTHFD1-215ENST00000557370 YBX3P16989 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
MTHFD1-215ENST00000557370 TXNRD1Q16881 649 aa9.18□□□□□ -0.94
MTHFD1-215ENST00000557370 NLGN2Q8NFZ4 835 aa9.18□□□□□ -0.94
MTHFD1-215ENST00000557370 PLEKHF1Q96S99 279 aa9.18□□□□□ -0.94
MTHFD1-215ENST00000557370 KIAA0232Q92628 1395 aa9.17□□□□□ -0.94
MTHFD1-215ENST00000557370 ATF7IPQ6VMQ6 1270 aa9.17□□□□□ -0.94
MTHFD1-215ENST00000557370 PANK1Q8TE04 598 aa9.17□□□□□ -0.94
MTHFD1-215ENST00000557370 LAS1LQ9Y4W2 734 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-215ENST00000557370 RGPD8O14715 1765 aaPredicted RBP9.17□□□□□ -0.94
MTHFD1-215ENST00000557370 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
MTHFD1-215ENST00000557370 KIF24Q5T7B8 1368 aa9.16□□□□□ -0.94
MTHFD1-215ENST00000557370 FYB1O15117 783 aa9.16□□□□□ -0.94
MTHFD1-215ENST00000557370 PTMSP20962 102 aa9.16□□□□□ -0.94
MTHFD1-215ENST00000557370 REM2Q8IYK8 340 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-215ENST00000557370 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
MTHFD1-215ENST00000557370 WDR90Q96KV7 1748 aa9.16□□□□□ -0.94
MTHFD1-215ENST00000557370 EDC4Q6P2E9 1401 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 KNDC1Q76NI1 1749 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 KIF3CO14782 793 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 TOMM70O94826 608 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 ZC3H6P61129 1189 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 NEUROD2Q15784 382 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 SMC5Q8IY18 1101 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 PROM2Q8N271 834 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 JMYQ8N9B5 988 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 TBC1D32Q96NH3 1257 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 CABP2Q9NPB3 220 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 TOPAZ1Q8N9V7 1692 aa9.15□□□□□ -0.94
MTHFD1-215ENST00000557370 ADCY9O60503 1353 aa9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 U2SURPO15042 1029 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 TNNT2P45379 298 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 GNAI1P63096 354 aa9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 HTRA3P83110 453 aa9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 L1TD1Q5T7N2 865 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 LARP1Q6PKG0 1096 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 GCC1Q96CN9 775 aa9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 PRAM1Q96QH2 718 aa9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 ZNF692Q9BU19 519 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 THRAP3Q9Y2W1 955 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 CD163L1Q9NR16 1453 aa9.14□□□□□ -0.95
MTHFD1-215ENST00000557370 SBF2Q86WG5 1849 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 HSPA1AP0DMV8 641 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 HSPA1BP0DMV9 641 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 RIPK4P57078 832 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 DDB1Q16531 1140 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 PTF1AQ7RTS3 328 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 C16orf71Q8IYS4 520 aaPredicted RBP9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 CDK19Q9BWU1 502 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 ISY1Q9ULR0 285 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 PCDHB15Q9Y5E8 787 aa9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 PARP4Q9UKK3 1724 aaKnown RBP9.13□□□□□ -0.95
MTHFD1-215ENST00000557370 USP19O94966 1318 aa9.12□□□□□ -0.95
MTHFD1-215ENST00000557370 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.95
MTHFD1-215ENST00000557370 EXOSC9Q06265 439 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-215ENST00000557370 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
MTHFD1-215ENST00000557370 IL27Q8NEV9 243 aa9.12□□□□□ -0.95
MTHFD1-215ENST00000557370 ALS2Q96Q42 1657 aa9.12□□□□□ -0.95
MTHFD1-215ENST00000557370 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
MTHFD1-215ENST00000557370 TRIM27P14373 513 aa9.11□□□□□ -0.95
MTHFD1-215ENST00000557370 SLC16A10Q8TF71 515 aa9.11□□□□□ -0.95
MTHFD1-215ENST00000557370 API5Q9BZZ5 524 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-215ENST00000557370 GGNBP2Q9H3C7 697 aa9.11□□□□□ -0.95
MTHFD1-215ENST00000557370 ZBTB40Q9NUA8 1239 aa9.11□□□□□ -0.95
MTHFD1-215ENST00000557370 CPSF1Q10570 1443 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-215ENST00000557370 MINK1Q8N4C8 1332 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 RLBP1P12271 317 aa9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 SAFB2Q14151 953 aaKnown RBP eCLIP9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 ITPRIPQ8IWB1 547 aa9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 NGDNQ8NEJ9 315 aaKnown RBP9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 SSH1Q8WYL5 1049 aa9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 CHMP5Q9NZZ3 219 aa9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 CIZ1Q9ULV3 898 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 MON2Q7Z3U7 1717 aa9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 PEAK1Q9H792 1746 aa9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 MAP2P11137 1827 aaKnown RBP9.1□□□□□ -0.95
MTHFD1-215ENST00000557370 TNS2Q63HR2 1409 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 GOLGB1Q14789 3259 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 NUCB1Q02818 461 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 BMP2KLQ5H9B9 411 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 SNX21Q969T3 373 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 C22orf23Q9BZE7 217 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 RSPH6AQ9H0K4 717 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 PLSCR2Q9NRY7 297 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 NOB1Q9ULX3 412 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-215ENST00000557370 ITSN1Q15811 1721 aa9.08□□□□□ -0.96
MTHFD1-215ENST00000557370 CRYBG1Q9Y4K1 1723 aa9.08□□□□□ -0.96
MTHFD1-215ENST00000557370 ZBTB7CA1YPR0 619 aa9.08□□□□□ -0.96
MTHFD1-215ENST00000557370 WASLO00401 505 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-215ENST00000557370 PITPNM1O00562 1244 aa9.08□□□□□ -0.96
MTHFD1-215ENST00000557370 RBM25P49756 843 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-215ENST00000557370 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
MTHFD1-215ENST00000557370 HSCBQ8IWL3 235 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms