RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 EMILIN1Q9Y6C2 1016 aa14.13□□□□□ -0.15
RDH11-210ENST00000557331 EYA1Q99502 592 aa14.12□□□□□ -0.15
RDH11-210ENST00000557331 ASAP1Q9ULH1 1129 aa14.12□□□□□ -0.15
RDH11-210ENST00000557331 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
RDH11-210ENST00000557331 KIF20BQ96Q89 1820 aa14.11□□□□□ -0.15
RDH11-210ENST00000557331 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
RDH11-210ENST00000557331 RFC4P35249 363 aa14.1□□□□□ -0.15
RDH11-210ENST00000557331 ITPK1Q13572 414 aa14.1□□□□□ -0.15
RDH11-210ENST00000557331 AMOTQ4VCS5 1084 aa14.1□□□□□ -0.15
RDH11-210ENST00000557331 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
RDH11-210ENST00000557331 CARD14Q9BXL6 1004 aa14.1□□□□□ -0.15
RDH11-210ENST00000557331 ATG3Q9NT62 314 aa14.1□□□□□ -0.15
RDH11-210ENST00000557331 PARP3Q9Y6F1 533 aa14.1□□□□□ -0.15
RDH11-210ENST00000557331 CICQ96RK0 1608 aaPredicted RBP14.1□□□□□ -0.15
RDH11-210ENST00000557331 MAP2P11137 1827 aaKnown RBP14.1□□□□□ -0.15
RDH11-210ENST00000557331 PLEKHO1Q53GL0 409 aaPredicted RBP14.09□□□□□ -0.15
RDH11-210ENST00000557331 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
RDH11-210ENST00000557331 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
RDH11-210ENST00000557331 TOGARAM1Q9Y4F4 1720 aa14.08□□□□□ -0.16
RDH11-210ENST00000557331 RPS6KA4O75676 772 aa14.08□□□□□ -0.16
RDH11-210ENST00000557331 ARHGAP27Q6ZUM4 889 aa14.08□□□□□ -0.16
RDH11-210ENST00000557331 C16orf71Q8IYS4 520 aaPredicted RBP14.08□□□□□ -0.16
RDH11-210ENST00000557331 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
RDH11-210ENST00000557331 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
RDH11-210ENST00000557331 FCHSD2O94868 740 aa14.07□□□□□ -0.16
RDH11-210ENST00000557331 FSTL1Q12841 308 aa14.07□□□□□ -0.16
RDH11-210ENST00000557331 ARHGEF1Q92888 912 aaKnown RBP14.07□□□□□ -0.16
RDH11-210ENST00000557331 PIM2Q9P1W9 311 aa14.07□□□□□ -0.16
RDH11-210ENST00000557331 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
RDH11-210ENST00000557331 PXDNLA1KZ92 1463 aa14.06□□□□□ -0.16
RDH11-210ENST00000557331 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
RDH11-210ENST00000557331 A0A0G2JLW4 131 aa14.06□□□□□ -0.16
RDH11-210ENST00000557331 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
RDH11-210ENST00000557331 KDM2BQ8NHM5 1336 aa14.06□□□□□ -0.16
RDH11-210ENST00000557331 C10orf71Q711Q0 1435 aa14.06□□□□□ -0.16
RDH11-210ENST00000557331 ANKRD26Q9UPS8 1709 aa14.05□□□□□ -0.16
RDH11-210ENST00000557331 GYS1P13807 737 aa14.05□□□□□ -0.16
RDH11-210ENST00000557331 CABP4P57796 275 aa14.05□□□□□ -0.16
RDH11-210ENST00000557331 DNAJC5GQ8N7S2 189 aa14.05□□□□□ -0.16
RDH11-210ENST00000557331 KDRP35968 1356 aa14.05□□□□□ -0.16
RDH11-210ENST00000557331 DPEP1P16444 411 aa14.04□□□□□ -0.16
RDH11-210ENST00000557331 EIF4A2Q14240 407 aaKnown RBP14.04□□□□□ -0.16
RDH11-210ENST00000557331 DALRD3Q5D0E6 543 aaKnown RBP14.04□□□□□ -0.16
RDH11-210ENST00000557331 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
RDH11-210ENST00000557331 ZC3H4Q9UPT8 1303 aaKnown RBP14.04□□□□□ -0.16
RDH11-210ENST00000557331 MTHFSP49914 203 aa14.03□□□□□ -0.16
RDH11-210ENST00000557331 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
RDH11-210ENST00000557331 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
RDH11-210ENST00000557331 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
RDH11-210ENST00000557331 ZNF530Q6P9A1 599 aaPredicted RBP14.01□□□□□ -0.17
RDH11-210ENST00000557331 SLC4A9Q96Q91 983 aa14.01□□□□□ -0.17
RDH11-210ENST00000557331 PCNTO95613 3336 aa14□□□□□ -0.17
RDH11-210ENST00000557331 NMRK2Q9NPI5 230 aa14□□□□□ -0.17
RDH11-210ENST00000557331 C4AP0C0L4 1744 aa14□□□□□ -0.17
RDH11-210ENST00000557331 ZPR1O75312 459 aa13.99□□□□□ -0.17
RDH11-210ENST00000557331 KCNA3P22001 575 aa13.99□□□□□ -0.17
RDH11-210ENST00000557331 CRKLP46109 303 aaKnown RBP13.99□□□□□ -0.17
RDH11-210ENST00000557331 JMYQ8N9B5 988 aa13.99□□□□□ -0.17
RDH11-210ENST00000557331 KLRG1Q96E93 195 aa13.99□□□□□ -0.17
RDH11-210ENST00000557331 USP42Q9H9J4 1324 aaKnown RBP13.98□□□□□ -0.17
RDH11-210ENST00000557331 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
RDH11-210ENST00000557331 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
RDH11-210ENST00000557331 ARFGEF1Q9Y6D6 1849 aa13.98□□□□□ -0.17
RDH11-210ENST00000557331 N4BP2Q86UW6 1770 aaPredicted RBP13.97□□□□□ -0.17
RDH11-210ENST00000557331 PTCD1O75127 700 aaKnown RBP13.97□□□□□ -0.17
RDH11-210ENST00000557331 TNNT2P45379 298 aaPredicted RBP13.97□□□□□ -0.17
RDH11-210ENST00000557331 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
RDH11-210ENST00000557331 RNF181Q9P0P0 153 aa13.97□□□□□ -0.17
RDH11-210ENST00000557331 COL5A3P25940 1745 aaPredicted RBP13.96□□□□□ -0.17
RDH11-210ENST00000557331 KIAA1551Q9HCM1 1747 aa13.96□□□□□ -0.17
RDH11-210ENST00000557331 BRCA1P38398 1863 aaKnown RBP13.96□□□□□ -0.17
RDH11-210ENST00000557331 TM4SF1P30408 202 aa13.96□□□□□ -0.17
RDH11-210ENST00000557331 FKBP8Q14318 412 aa13.96□□□□□ -0.17
RDH11-210ENST00000557331 PDZRN3Q9UPQ7 1066 aa13.96□□□□□ -0.17
RDH11-210ENST00000557331 MYH14Q7Z406 1995 aaKnown RBP13.95□□□□□ -0.18
RDH11-210ENST00000557331 KDM6AO15550 1401 aaPredicted RBP13.94□□□□□ -0.18
RDH11-210ENST00000557331 VEGFAP15692 232 aaPredicted RBP13.94□□□□□ -0.18
RDH11-210ENST00000557331 LMNB1P20700 586 aa13.94□□□□□ -0.18
RDH11-210ENST00000557331 AKAP4Q5JQC9 854 aa13.94□□□□□ -0.18
RDH11-210ENST00000557331 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
RDH11-210ENST00000557331 POLRMTO00411 1230 aaKnown RBP13.93□□□□□ -0.18
RDH11-210ENST00000557331 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
RDH11-210ENST00000557331 DDR1Q08345 913 aa13.93□□□□□ -0.18
RDH11-210ENST00000557331 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
RDH11-210ENST00000557331 INTS5Q6P9B9 1019 aaKnown RBP13.93□□□□□ -0.18
RDH11-210ENST00000557331 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
RDH11-210ENST00000557331 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
RDH11-210ENST00000557331 PANK3Q9H999 370 aa13.93□□□□□ -0.18
RDH11-210ENST00000557331 RRAGCQ9HB90 399 aa13.93□□□□□ -0.18
RDH11-210ENST00000557331 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
RDH11-210ENST00000557331 GLTPD2A6NH11 291 aa13.92□□□□□ -0.18
RDH11-210ENST00000557331 SULT6B1Q6IMI4 303 aa13.92□□□□□ -0.18
RDH11-210ENST00000557331 TTLL6Q8N841 843 aa13.92□□□□□ -0.18
RDH11-210ENST00000557331 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
RDH11-210ENST00000557331 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
RDH11-210ENST00000557331 WDR90Q96KV7 1748 aa13.92□□□□□ -0.18
RDH11-210ENST00000557331 A0A087WZG4 1122 aa13.91□□□□□ -0.18
RDH11-210ENST00000557331 DPY19L2Q6NUT2 758 aa13.91□□□□□ -0.18
RDH11-210ENST00000557331 KNSTRNQ9Y448 316 aa13.91□□□□□ -0.18
RDH11-210ENST00000557331 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms