RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
ATXN3-247ENST00000557311 ERBINQ96RT1 1412 aa7.54□□□□□ -1.2
ATXN3-247ENST00000557311 MOXD2PA6NHM9 499 aa7.54□□□□□ -1.2
ATXN3-247ENST00000557311 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
ATXN3-247ENST00000557311 BRINP3Q76B58 766 aa7.54□□□□□ -1.2
ATXN3-247ENST00000557311 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
ATXN3-247ENST00000557311 NOS1P29475 1434 aa7.53□□□□□ -1.2
ATXN3-247ENST00000557311 MROH1Q8NDA8 1641 aa7.53□□□□□ -1.2
ATXN3-247ENST00000557311 EIF2AK4Q9P2K8 1649 aaKnown RBP7.53□□□□□ -1.2
ATXN3-247ENST00000557311 BRICD5Q6PL45 260 aa7.53□□□□□ -1.2
ATXN3-247ENST00000557311 SYMPKQ92797 1274 aaKnown RBP7.53□□□□□ -1.2
ATXN3-247ENST00000557311 THAP11Q96EK4 314 aa7.53□□□□□ -1.2
ATXN3-247ENST00000557311 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
ATXN3-247ENST00000557311 AMOTL2Q9Y2J4 779 aa7.53□□□□□ -1.2
ATXN3-247ENST00000557311 ABCC5O15440 1437 aa7.52□□□□□ -1.2
ATXN3-247ENST00000557311 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.2
ATXN3-247ENST00000557311 PIK3R4Q99570 1358 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 RIC3Q7Z5B4 369 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 FAM160A2Q8N612 972 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-247ENST00000557311 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 RSPH6AQ9H0K4 717 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 AAASQ9NRG9 546 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 POLR3EQ9NVU0 708 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 CHIC2Q9UKJ5 165 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.21
ATXN3-247ENST00000557311 ANKRD30AQ9BXX3 1397 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 FOXC1Q12948 553 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 CCDC125Q86Z20 511 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 CCDC24Q8N4L8 307 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 TSC1Q92574 1164 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 DDRGK1Q96HY6 314 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 FAM117AQ9C073 453 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 PRDM9Q9NQV7 894 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 PIK3C2BO00750 1634 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 LMTK2Q8IWU2 1503 aa7.51□□□□□ -1.21
ATXN3-247ENST00000557311 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
ATXN3-247ENST00000557311 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
ATXN3-247ENST00000557311 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
ATXN3-247ENST00000557311 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-247ENST00000557311 IL27Q8NEV9 243 aa7.5□□□□□ -1.21
ATXN3-247ENST00000557311 DACH1Q9UI36 760 aa7.5□□□□□ -1.21
ATXN3-247ENST00000557311 SALL2Q9Y467 1007 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-247ENST00000557311 ZFYVE9O95405 1425 aa7.5□□□□□ -1.21
ATXN3-247ENST00000557311 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
ATXN3-247ENST00000557311 ATAD2Q6PL18 1390 aa7.49□□□□□ -1.21
ATXN3-247ENST00000557311 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
ATXN3-247ENST00000557311 RSBN1LQ6PCB5 846 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-247ENST00000557311 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-247ENST00000557311 PCDHGC3Q9UN70 934 aa7.49□□□□□ -1.21
ATXN3-247ENST00000557311 FCF1Q9Y324 198 aaKnown RBP7.49□□□□□ -1.21
ATXN3-247ENST00000557311 RGS12O14924 1447 aa7.48□□□□□ -1.21
ATXN3-247ENST00000557311 ZBTB24O43167 697 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-247ENST00000557311 MTMR2Q13614 643 aa7.48□□□□□ -1.21
ATXN3-247ENST00000557311 MYSM1Q5VVJ2 828 aa7.48□□□□□ -1.21
ATXN3-247ENST00000557311 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
ATXN3-247ENST00000557311 RETREG3Q86VR2 466 aa7.48□□□□□ -1.21
ATXN3-247ENST00000557311 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-247ENST00000557311 USP21Q9UK80 565 aa7.48□□□□□ -1.21
ATXN3-247ENST00000557311 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-247ENST00000557311 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
ATXN3-247ENST00000557311 ADGRB3O60242 1522 aa7.47□□□□□ -1.21
ATXN3-247ENST00000557311 CFAP65Q6ZU64 1925 aaKnown RBP7.47□□□□□ -1.21
ATXN3-247ENST00000557311 DAPK1P53355 1430 aa7.47□□□□□ -1.21
ATXN3-247ENST00000557311 CLK2P49760 499 aaKnown RBP7.47□□□□□ -1.21
ATXN3-247ENST00000557311 BRPF1P55201 1214 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-247ENST00000557311 MSS51Q4VC12 460 aa7.47□□□□□ -1.21
ATXN3-247ENST00000557311 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-247ENST00000557311 ZBTB3Q9H5J0 574 aa7.47□□□□□ -1.21
ATXN3-247ENST00000557311 TOR4AQ9NXH8 423 aa7.47□□□□□ -1.21
ATXN3-247ENST00000557311 PCDHB15Q9Y5E8 787 aa7.47□□□□□ -1.21
ATXN3-247ENST00000557311 RPRD2Q5VT52 1461 aaKnown RBP7.47□□□□□ -1.21
ATXN3-247ENST00000557311 CEP152O94986 1710 aa7.47□□□□□ -1.21
ATXN3-247ENST00000557311 DCCP43146 1447 aa7.46□□□□□ -1.21
ATXN3-247ENST00000557311 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.21
ATXN3-247ENST00000557311 SPTLC1O15269 473 aa7.46□□□□□ -1.22
ATXN3-247ENST00000557311 RPIAP49247 311 aa7.46□□□□□ -1.22
ATXN3-247ENST00000557311 PRR7Q8TB68 274 aa7.46□□□□□ -1.22
ATXN3-247ENST00000557311 CABLES1Q8TDN4 633 aa7.46□□□□□ -1.22
ATXN3-247ENST00000557311 DDX17Q92841 729 aaKnown RBP7.46□□□□□ -1.22
ATXN3-247ENST00000557311 PNPLA6Q8IY17 1366 aa7.46□□□□□ -1.22
ATXN3-247ENST00000557311 SPDYE5A6NIY4 337 aa7.45□□□□□ -1.22
ATXN3-247ENST00000557311 LIMD1Q9UGP4 676 aa7.45□□□□□ -1.22
ATXN3-247ENST00000557311 PTPRUQ92729 1446 aa7.44□□□□□ -1.22
ATXN3-247ENST00000557311 JUNDP17535 347 aa7.44□□□□□ -1.22
ATXN3-247ENST00000557311 SOS2Q07890 1332 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-247ENST00000557311 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
ATXN3-247ENST00000557311 MST1RQ04912 1400 aa7.44□□□□□ -1.22
ATXN3-247ENST00000557311 ANKRD50Q9ULJ7 1429 aa7.44□□□□□ -1.22
ATXN3-247ENST00000557311 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
ATXN3-247ENST00000557311 CD2BP2O95400 341 aaKnown RBP7.43□□□□□ -1.22
ATXN3-247ENST00000557311 AVPP01185 164 aa7.43□□□□□ -1.22
ATXN3-247ENST00000557311 HRCP23327 699 aa7.43□□□□□ -1.22
ATXN3-247ENST00000557311 GJA5P36382 358 aa7.43□□□□□ -1.22
ATXN3-247ENST00000557311 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-247ENST00000557311 ASXL1Q8IXJ9 1541 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 SRCAPQ6ZRS2 3230 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 CTHP32929 405 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
ATXN3-247ENST00000557311 SKIV2LQ15477 1246 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms