RNA–Protein interactions for RNA: ENST00000556903.2

FDPSP3-201, Transcript of farnesyl diphosphate synthase pseudogene 3, humanhuman

BASIC

Gene FDPSP3, Length 1,013 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP3-201ENST00000556903 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
FDPSP3-201ENST00000556903 MYH16Q9H6N6 1097 aa10.18□□□□□ -0.78
FDPSP3-201ENST00000556903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.18□□□□□ -0.78
FDPSP3-201ENST00000556903 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
FDPSP3-201ENST00000556903 BTAF1O14981 1849 aa10.18□□□□□ -0.78
FDPSP3-201ENST00000556903 SLFN5Q08AF3 891 aa10.17□□□□□ -0.78
FDPSP3-201ENST00000556903 TXNRD1Q16881 649 aa10.17□□□□□ -0.78
FDPSP3-201ENST00000556903 MTHFSDQ2M296 383 aaKnown RBP10.17□□□□□ -0.78
FDPSP3-201ENST00000556903 PAPPAQ13219 1627 aa10.16□□□□□ -0.78
FDPSP3-201ENST00000556903 GNAT3A8MTJ3 354 aa10.16□□□□□ -0.78
FDPSP3-201ENST00000556903 CDCA7LQ96GN5 454 aa10.16□□□□□ -0.78
FDPSP3-201ENST00000556903 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
FDPSP3-201ENST00000556903 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
FDPSP3-201ENST00000556903 RGPD2P0DJD1 1756 aa10.16□□□□□ -0.78
FDPSP3-201ENST00000556903 C1orf141Q5JVX7 400 aa10.15□□□□□ -0.78
FDPSP3-201ENST00000556903 ZNF530Q6P9A1 599 aaPredicted RBP10.15□□□□□ -0.78
FDPSP3-201ENST00000556903 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
FDPSP3-201ENST00000556903 QSER1Q2KHR3 1735 aa10.15□□□□□ -0.78
FDPSP3-201ENST00000556903 SHANK3Q9BYB0 1731 aa10.15□□□□□ -0.78
FDPSP3-201ENST00000556903 MAP3K5Q99683 1374 aa10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 GNAI1P63096 354 aa10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 SLC15A2Q16348 729 aa10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 AKAP4Q5JQC9 854 aa10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 DUSP27Q5VZP5 1158 aa10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 TRMT2AQ8IZ69 625 aaKnown RBP10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 IFT57Q9NWB7 429 aa10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
FDPSP3-201ENST00000556903 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
FDPSP3-201ENST00000556903 HSP90AB1P08238 724 aaKnown RBP10.13□□□□□ -0.79
FDPSP3-201ENST00000556903 DOT1LQ8TEK3 1739 aa10.13□□□□□ -0.79
FDPSP3-201ENST00000556903 MEGF6O75095 1541 aa10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 SLC27A3Q5K4L6 730 aa10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 IFNL2Q8IZJ0 200 aa10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 ZCRB1Q8TBF4 217 aaKnown RBP10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 ACSBG1Q96GR2 724 aa10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 CFAP44Q96MT7 982 aa10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 LY75O60449 1722 aa10.12□□□□□ -0.79
FDPSP3-201ENST00000556903 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
FDPSP3-201ENST00000556903 MCM10Q7L590 875 aa10.11□□□□□ -0.79
FDPSP3-201ENST00000556903 THUMPD2Q9BTF0 503 aaKnown RBP10.11□□□□□ -0.79
FDPSP3-201ENST00000556903 MTFR1LQ9H019 292 aa10.11□□□□□ -0.79
FDPSP3-201ENST00000556903 SPINK5Q9NQ38 1064 aaPredicted RBP10.11□□□□□ -0.79
FDPSP3-201ENST00000556903 BABAM1Q9NWV8 329 aa10.11□□□□□ -0.79
FDPSP3-201ENST00000556903 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 FANCIQ9NVI1 1328 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 HMGB2P26583 209 aaKnown RBP10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 PTGER2P43116 358 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 TEFQ10587 303 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 RCAN3Q9UKA8 241 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 LAS1LQ9Y4W2 734 aaKnown RBP10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 COL24A1Q17RW2 1714 aa10.1□□□□□ -0.79
FDPSP3-201ENST00000556903 CHL1O00533 1208 aa10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 RNMTO43148 476 aaKnown RBP10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 PHKG2P15735 406 aa10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 TAF7Q15545 349 aaPredicted RBP10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 IL17REQ8NFR9 667 aa10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 PDGFDQ9GZP0 370 aaPredicted RBP10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 PKD1L3Q7Z443 1732 aa10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 CEMIPQ8WUJ3 1361 aa10.09□□□□□ -0.79
FDPSP3-201ENST00000556903 ZBTB7AO95365 584 aa10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 NEFLP07196 543 aa10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 MPRIPQ6WCQ1 1025 aa10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 SLC16A10Q8TF71 515 aa10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 TSR2Q969E8 191 aaKnown RBP10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 SGIP1Q9BQI5 828 aa10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
FDPSP3-201ENST00000556903 TUBGCP6Q96RT7 1819 aa10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 CYP27B1O15528 508 aa10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 EXOSC9Q06265 439 aaKnown RBP10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 AKT1S1Q96B36 256 aa10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 TSPYL4Q9UJ04 414 aa10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 SUPT16HQ9Y5B9 1047 aaKnown RBP10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 DLG5Q8TDM6 1919 aa10.07□□□□□ -0.8
FDPSP3-201ENST00000556903 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 ZNF827Q17R98 1081 aa10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 SYTL4Q96C24 671 aaPredicted RBP10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 CHMP4AQ9BY43 222 aa10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 LGR6Q9HBX8 967 aa10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
FDPSP3-201ENST00000556903 UTRNP46939 3433 aa10.05□□□□□ -0.8
FDPSP3-201ENST00000556903 CHD4Q14839 1912 aa10.05□□□□□ -0.8
FDPSP3-201ENST00000556903 ITGB4P16144 1822 aa10.05□□□□□ -0.8
FDPSP3-201ENST00000556903 ERVV-2B6SEH9 535 aa10.05□□□□□ -0.8
FDPSP3-201ENST00000556903 CABP4P57796 275 aa10.05□□□□□ -0.8
FDPSP3-201ENST00000556903 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
FDPSP3-201ENST00000556903 TAF1LQ8IZX4 1826 aa10.05□□□□□ -0.8
FDPSP3-201ENST00000556903 C5P01031 1676 aa10.04□□□□□ -0.8
FDPSP3-201ENST00000556903 BTBD11A6QL63 1104 aa10.04□□□□□ -0.8
FDPSP3-201ENST00000556903 YY1P25490 414 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms