RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 HOXC9P31274 260 aa6.73□□□□□ -1.33
GPHN-213ENST00000556501 RPAP2Q8IXW5 612 aaPredicted RBP6.73□□□□□ -1.33
GPHN-213ENST00000556501 RTF1Q92541 710 aaKnown RBP6.73□□□□□ -1.33
GPHN-213ENST00000556501 SNX21Q969T3 373 aa6.73□□□□□ -1.33
GPHN-213ENST00000556501 SLKQ9H2G2 1235 aaPredicted RBP6.73□□□□□ -1.33
GPHN-213ENST00000556501 DCTPP1Q9H773 170 aa6.73□□□□□ -1.33
GPHN-213ENST00000556501 TSPYL4Q9UJ04 414 aa6.73□□□□□ -1.33
GPHN-213ENST00000556501 NCAPD2Q15021 1401 aa6.73□□□□□ -1.33
GPHN-213ENST00000556501 LMTK3Q96Q04 1460 aa6.73□□□□□ -1.33
GPHN-213ENST00000556501 RGPD2P0DJD1 1756 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 FOXO3O43524 673 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 EIF5BO60841 1220 aaKnown RBP6.72□□□□□ -1.33
GPHN-213ENST00000556501 NLRP6P59044 892 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 CEP85Q6P2H3 762 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 TBC1D9Q6ZT07 1266 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 HSCBQ8IWL3 235 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 BABAM1Q9NWV8 329 aa6.72□□□□□ -1.33
GPHN-213ENST00000556501 SIPA1L3O60292 1781 aaPredicted RBP6.72□□□□□ -1.33
GPHN-213ENST00000556501 SETD1BQ9UPS6 1966 aaKnown RBP6.71□□□□□ -1.33
GPHN-213ENST00000556501 ADAMTS7Q9UKP4 1686 aa6.71□□□□□ -1.33
GPHN-213ENST00000556501 OVOS2A0A0G2JMS6 1433 aa6.71□□□□□ -1.34
GPHN-213ENST00000556501 CCT4P50991 539 aaKnown RBP6.71□□□□□ -1.34
GPHN-213ENST00000556501 TTC22Q5TAA0 569 aa6.71□□□□□ -1.34
GPHN-213ENST00000556501 CHRDL2Q6WN34 429 aa6.71□□□□□ -1.34
GPHN-213ENST00000556501 HS6ST3Q8IZP7 471 aa6.71□□□□□ -1.34
GPHN-213ENST00000556501 MEIS3Q99687 375 aa6.71□□□□□ -1.34
GPHN-213ENST00000556501 CHMP5Q9NZZ3 219 aa6.71□□□□□ -1.34
GPHN-213ENST00000556501 PHF8Q9UPP1 1060 aa6.71□□□□□ -1.34
GPHN-213ENST00000556501 CEMIPQ8WUJ3 1361 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 NPHP4O75161 1426 aaPredicted RBP6.7□□□□□ -1.34
GPHN-213ENST00000556501 GNAT3A8MTJ3 354 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 HMMRO75330 724 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 GSPT1P15170 499 aaKnown RBP6.7□□□□□ -1.34
GPHN-213ENST00000556501 DDIT3P35638 169 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 G2E3Q7L622 706 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 ANKLE2Q86XL3 938 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 KIF2CQ99661 725 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 STK31Q9BXU1 1019 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 ALS2Q96Q42 1657 aa6.7□□□□□ -1.34
GPHN-213ENST00000556501 MST1RQ04912 1400 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 SPDYE2BA6NHP3 402 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 SPDYE6P0CI01 402 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 SPDYE2Q495Y8 402 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 CCDC30Q5VVM6 783 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 ABTB2Q8N961 1025 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 IP6K1Q92551 441 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 MIS18AQ9NYP9 233 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 SSUH2Q9Y2M2 353 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 CRYBG1Q9Y4K1 1723 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 ABCC6O95255 1503 aa6.69□□□□□ -1.34
GPHN-213ENST00000556501 PXDNQ92626 1479 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 PLEKHG5O94827 1062 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 GNAI3P08754 354 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 MCM4P33991 863 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 FLIIQ13045 1269 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 TAF7Q15545 349 aaPredicted RBP6.68□□□□□ -1.34
GPHN-213ENST00000556501 NUTM2GQ5VZR2 741 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 IL17REQ8NFR9 667 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 OTUD7AQ8TE49 926 aaPredicted RBP6.68□□□□□ -1.34
GPHN-213ENST00000556501 AK9Q5TCS8 1911 aa6.68□□□□□ -1.34
GPHN-213ENST00000556501 F6X3S4 739 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 GNAI2P04899 355 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 HSP90AB1P08238 724 aaKnown RBP6.67□□□□□ -1.34
GPHN-213ENST00000556501 HOXB7P09629 217 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 RABEP1Q15276 862 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 KCNH5Q8NCM2 988 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 OSBPL3Q9H4L5 887 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 SALL3Q9BXA9 1300 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 IBTKQ9P2D0 1353 aaPredicted RBP6.67□□□□□ -1.34
GPHN-213ENST00000556501 RGPD5Q99666 1765 aa6.67□□□□□ -1.34
GPHN-213ENST00000556501 DDX11L8A8MPP1 907 aa6.66□□□□□ -1.34
GPHN-213ENST00000556501 K7ELQ4 463 aaPredicted RBP6.66□□□□□ -1.34
GPHN-213ENST00000556501 SMARCA5O60264 1052 aaPredicted RBP6.66□□□□□ -1.34
GPHN-213ENST00000556501 SDSP20132 328 aa6.66□□□□□ -1.34
GPHN-213ENST00000556501 FKBP5Q13451 457 aaPredicted RBP6.66□□□□□ -1.34
GPHN-213ENST00000556501 SLC4A10Q6U841 1118 aa6.66□□□□□ -1.34
GPHN-213ENST00000556501 C16orf71Q8IYS4 520 aaPredicted RBP6.66□□□□□ -1.34
GPHN-213ENST00000556501 USHBP1Q8N6Y0 703 aa6.66□□□□□ -1.34
GPHN-213ENST00000556501 LTV1Q96GA3 475 aaPredicted RBP6.66□□□□□ -1.34
GPHN-213ENST00000556501 AOX1Q06278 1338 aa6.66□□□□□ -1.34
GPHN-213ENST00000556501 SCN11AQ9UI33 1791 aa6.66□□□□□ -1.34
GPHN-213ENST00000556501 C5P01031 1676 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 COL18A1P39060 1754 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
GPHN-213ENST00000556501 PDE1AP54750 535 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 ATP8B2P98198 1209 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 HDGFL1Q5TGJ6 251 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 CASC1Q6TDU7 716 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 C14orf37Q86TY3 774 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 ARXQ96QS3 562 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 USP26Q9BXU7 913 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 CHMP4AQ9BY43 222 aa6.65□□□□□ -1.34
GPHN-213ENST00000556501 C1orf167Q5SNV9 1468 aa6.65□□□□□ -1.35
GPHN-213ENST00000556501 PKD1L3Q7Z443 1732 aa6.64□□□□□ -1.35
GPHN-213ENST00000556501 PARP4Q9UKK3 1724 aaKnown RBP6.64□□□□□ -1.35
GPHN-213ENST00000556501 REC8O95072 547 aa6.64□□□□□ -1.35
GPHN-213ENST00000556501 PTMSP20962 102 aa6.64□□□□□ -1.35
GPHN-213ENST00000556501 EIF4A1P60842 406 aaKnown RBP6.64□□□□□ -1.35
GPHN-213ENST00000556501 PSME1Q06323 249 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms