RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 SSFA2P28290 1259 aa7.51□□□□□ -1.21
CDKN3-210ENST00000556305 FAM69CQ0P6D2 419 aa7.51□□□□□ -1.21
CDKN3-210ENST00000556305 NNTQ13423 1086 aa7.51□□□□□ -1.21
CDKN3-210ENST00000556305 OSBPL3Q9H4L5 887 aa7.51□□□□□ -1.21
CDKN3-210ENST00000556305 GNEQ9Y223 722 aaKnown RBP7.51□□□□□ -1.21
CDKN3-210ENST00000556305 IVNS1ABPQ9Y6Y0 642 aa7.51□□□□□ -1.21
CDKN3-210ENST00000556305 WASLO00401 505 aaPredicted RBP7.5□□□□□ -1.21
CDKN3-210ENST00000556305 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
CDKN3-210ENST00000556305 GDF10P55107 478 aa7.5□□□□□ -1.21
CDKN3-210ENST00000556305 C1orf216Q8TAB5 229 aa7.5□□□□□ -1.21
CDKN3-210ENST00000556305 FAM181BA6NEQ2 426 aa7.49□□□□□ -1.21
CDKN3-210ENST00000556305 PRMT3O60678 531 aa7.49□□□□□ -1.21
CDKN3-210ENST00000556305 DKK1O94907 266 aa7.49□□□□□ -1.21
CDKN3-210ENST00000556305 NR3C2P08235 984 aa7.49□□□□□ -1.21
CDKN3-210ENST00000556305 SNRPBP14678 240 aaKnown RBP7.49□□□□□ -1.21
CDKN3-210ENST00000556305 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDKN3-210ENST00000556305 TRIM47Q96LD4 638 aa7.49□□□□□ -1.21
CDKN3-210ENST00000556305 ZNF358Q9NW07 568 aa7.49□□□□□ -1.21
CDKN3-210ENST00000556305 INHAP05111 366 aa7.48□□□□□ -1.21
CDKN3-210ENST00000556305 ATP13A2Q9NQ11 1180 aa7.48□□□□□ -1.21
CDKN3-210ENST00000556305 CXXC1Q9P0U4 656 aaPredicted RBP7.48□□□□□ -1.21
CDKN3-210ENST00000556305 LILRA1O75019 489 aa7.47□□□□□ -1.21
CDKN3-210ENST00000556305 PTCD1O75127 700 aaKnown RBP7.47□□□□□ -1.21
CDKN3-210ENST00000556305 ADH1AP07327 375 aa7.47□□□□□ -1.21
CDKN3-210ENST00000556305 TSEN2Q8NCE0 465 aaKnown RBP7.47□□□□□ -1.21
CDKN3-210ENST00000556305 GAS2L2Q8NHY3 880 aa7.47□□□□□ -1.21
CDKN3-210ENST00000556305 VTI1AQ96AJ9 217 aa7.47□□□□□ -1.21
CDKN3-210ENST00000556305 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDKN3-210ENST00000556305 CHMP3Q9Y3E7 222 aa7.47□□□□□ -1.21
CDKN3-210ENST00000556305 TMEM229AB2RXF0 380 aa7.46□□□□□ -1.22
CDKN3-210ENST00000556305 SCNN1DP51172 638 aa7.46□□□□□ -1.22
CDKN3-210ENST00000556305 PRIMPOLQ96LW4 560 aa7.46□□□□□ -1.22
CDKN3-210ENST00000556305 FOXO3O43524 673 aa7.45□□□□□ -1.22
CDKN3-210ENST00000556305 ZIC2O95409 532 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-210ENST00000556305 IGFBP4P22692 258 aa7.45□□□□□ -1.22
CDKN3-210ENST00000556305 GTF2E1P29083 439 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-210ENST00000556305 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
CDKN3-210ENST00000556305 SUZ12Q15022 739 aaKnown RBP7.45□□□□□ -1.22
CDKN3-210ENST00000556305 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDKN3-210ENST00000556305 TXNDC2Q86VQ3 553 aa7.45□□□□□ -1.22
CDKN3-210ENST00000556305 NBPF15Q8N660 670 aa7.45□□□□□ -1.22
CDKN3-210ENST00000556305 ETNK1Q9HBU6 452 aa7.45□□□□□ -1.22
CDKN3-210ENST00000556305 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
CDKN3-210ENST00000556305 SERTAD1Q9UHV2 236 aa7.45□□□□□ -1.22
CDKN3-210ENST00000556305 OCLNQ16625 522 aa7.44□□□□□ -1.22
CDKN3-210ENST00000556305 CCDC27Q2M243 656 aa7.44□□□□□ -1.22
CDKN3-210ENST00000556305 PHLDB3Q6NSJ2 640 aa7.44□□□□□ -1.22
CDKN3-210ENST00000556305 NLRP3Q96P20 1036 aa7.44□□□□□ -1.22
CDKN3-210ENST00000556305 SLC4A9Q96Q91 983 aa7.44□□□□□ -1.22
CDKN3-210ENST00000556305 SENP2Q9HC62 589 aa7.44□□□□□ -1.22
CDKN3-210ENST00000556305 J3QL48 77 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 UPP2O95045 317 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 WEE1P30291 646 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 ADD1P35611 737 aaKnown RBP7.43□□□□□ -1.22
CDKN3-210ENST00000556305 MFAP1P55081 439 aaKnown RBP7.43□□□□□ -1.22
CDKN3-210ENST00000556305 SCG3Q8WXD2 468 aaKnown RBP7.43□□□□□ -1.22
CDKN3-210ENST00000556305 COL26A1Q96A83 441 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 ITPKCQ96DU7 683 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 ESYT1Q9BSJ8 1104 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 RAB6BQ9NRW1 208 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 SLAIN2Q9P270 581 aa7.43□□□□□ -1.22
CDKN3-210ENST00000556305 A6NJY4 79 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 SMPD1P17405 629 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 PTGIRP43119 386 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 SMTNP53814 917 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 CLN3Q13286 438 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 TLR1Q15399 786 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 Q6ZVU0 165 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 TAS1R3Q7RTX0 852 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 TNS4Q8IZW8 715 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 ZSCAN1Q8NBB4 408 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 CNKSR1Q969H4 720 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 XAGE2Q96GT9 111 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 EGFL7Q9UHF1 273 aa7.42□□□□□ -1.22
CDKN3-210ENST00000556305 PPP1R12BO60237 982 aaPredicted RBP7.41□□□□□ -1.22
CDKN3-210ENST00000556305 TIMP2P16035 220 aa7.41□□□□□ -1.22
CDKN3-210ENST00000556305 CBLBQ13191 982 aa7.41□□□□□ -1.22
CDKN3-210ENST00000556305 MKNK1Q9BUB5 465 aa7.41□□□□□ -1.22
CDKN3-210ENST00000556305 SCHIP1Q9P0W5 487 aaPredicted RBP7.41□□□□□ -1.22
CDKN3-210ENST00000556305 ATAD2Q6PL18 1390 aa7.41□□□□□ -1.22
CDKN3-210ENST00000556305 A0A1W2PRU2 124 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 MEN1O00255 615 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 ABL1P00519 1130 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 PSMA6P60900 246 aaKnown RBP7.4□□□□□ -1.22
CDKN3-210ENST00000556305 RELBQ01201 579 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 MTFR1Q15390 333 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 SLC9A9Q8IVB4 645 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
CDKN3-210ENST00000556305 KIFC2Q96AC6 838 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 TSEN34Q9BSV6 310 aaKnown RBP7.4□□□□□ -1.22
CDKN3-210ENST00000556305 TSPAN10Q9H1Z9 355 aaPredicted RBP7.4□□□□□ -1.22
CDKN3-210ENST00000556305 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.22
CDKN3-210ENST00000556305 SOWAHDA6NJG2 315 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 CDK2AP1O14519 115 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 LGR5O75473 907 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 STAU1O95793 577 aaKnown RBP7.39□□□□□ -1.23
CDKN3-210ENST00000556305 IL2RAP01589 272 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 SERPINB4P48594 390 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 EPHA4P54764 986 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms