RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 PHLPP1O60346 1717 aa23.7■■□□□ 1.38
SDR39U1-218ENST00000556262 ADAMTS7Q9UKP4 1686 aa23.7■■□□□ 1.38
SDR39U1-218ENST00000556262 KDM6AO15550 1401 aaPredicted RBP23.69■■□□□ 1.38
SDR39U1-218ENST00000556262 TOM1O60784 492 aa23.69■■□□□ 1.38
SDR39U1-218ENST00000556262 G2E3Q7L622 706 aa23.69■■□□□ 1.38
SDR39U1-218ENST00000556262 IFNL2Q8IZJ0 200 aa23.69■■□□□ 1.38
SDR39U1-218ENST00000556262 CARD10Q9BWT7 1032 aa23.69■■□□□ 1.38
SDR39U1-218ENST00000556262 PKD1L3Q7Z443 1732 aa23.69■■□□□ 1.38
SDR39U1-218ENST00000556262 COL22A1Q8NFW1 1626 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-218ENST00000556262 ZBTB40Q9NUA8 1239 aa23.68■■□□□ 1.38
SDR39U1-218ENST00000556262 MSH5O43196 834 aa23.67■■□□□ 1.38
SDR39U1-218ENST00000556262 SIPA1L3O60292 1781 aaPredicted RBP23.67■■□□□ 1.38
SDR39U1-218ENST00000556262 SCN11AQ9UI33 1791 aa23.67■■□□□ 1.38
SDR39U1-218ENST00000556262 RGS12O14924 1447 aa23.67■■□□□ 1.38
SDR39U1-218ENST00000556262 CCDC30Q5VVM6 783 aa23.67■■□□□ 1.38
SDR39U1-218ENST00000556262 STK31Q9BXU1 1019 aa23.67■■□□□ 1.38
SDR39U1-218ENST00000556262 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
SDR39U1-218ENST00000556262 COL16A1Q07092 1604 aaPredicted RBP23.66■■□□□ 1.38
SDR39U1-218ENST00000556262 PLEKHG2Q9H7P9 1386 aa23.66■■□□□ 1.38
SDR39U1-218ENST00000556262 PTPRCP08575 1304 aa23.65■■□□□ 1.38
SDR39U1-218ENST00000556262 SOS1Q07889 1333 aaPredicted RBP23.65■■□□□ 1.38
SDR39U1-218ENST00000556262 PARP4Q9UKK3 1724 aaKnown RBP23.65■■□□□ 1.38
SDR39U1-218ENST00000556262 ZBTB7BO15156 539 aaPredicted RBP23.65■■□□□ 1.38
SDR39U1-218ENST00000556262 HDGFL1Q5TGJ6 251 aa23.64■■□□□ 1.38
SDR39U1-218ENST00000556262 NFATC2IPQ8NCF5 419 aa23.64■■□□□ 1.38
SDR39U1-218ENST00000556262 UBAP1LF5GYI3 381 aa23.63■■□□□ 1.37
SDR39U1-218ENST00000556262 IL2RBP14784 551 aa23.63■■□□□ 1.37
SDR39U1-218ENST00000556262 EIF2S2P20042 333 aaKnown RBP23.63■■□□□ 1.37
SDR39U1-218ENST00000556262 ZCRB1Q8TBF4 217 aaKnown RBP23.63■■□□□ 1.37
SDR39U1-218ENST00000556262 SLC52A2Q9HAB3 445 aa23.63■■□□□ 1.37
SDR39U1-218ENST00000556262 DCAF5Q96JK2 942 aa23.63■■□□□ 1.37
SDR39U1-218ENST00000556262 COL14A1Q05707 1796 aaKnown RBP23.63■■□□□ 1.37
SDR39U1-218ENST00000556262 SLC39A6Q13433 755 aa23.61■■□□□ 1.37
SDR39U1-218ENST00000556262 ADAMTS2O95450 1211 aa23.61■■□□□ 1.37
SDR39U1-218ENST00000556262 RWDD1Q9H446 243 aaPredicted RBP23.61■■□□□ 1.37
SDR39U1-218ENST00000556262 CACNA1FO60840 1977 aa23.61■■□□□ 1.37
SDR39U1-218ENST00000556262 F6X3S4 739 aa23.6■■□□□ 1.37
SDR39U1-218ENST00000556262 FLIIQ13045 1269 aa23.6■■□□□ 1.37
SDR39U1-218ENST00000556262 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-218ENST00000556262 C1orf115Q9H7X2 142 aa23.6■■□□□ 1.37
SDR39U1-218ENST00000556262 PCDH11XQ9BZA7 1347 aa23.59■■□□□ 1.37
SDR39U1-218ENST00000556262 PCDH11YQ9BZA8 1340 aa23.59■■□□□ 1.37
SDR39U1-218ENST00000556262 HSP90AB1P08238 724 aaKnown RBP23.59■■□□□ 1.37
SDR39U1-218ENST00000556262 HOXB7P09629 217 aa23.59■■□□□ 1.37
SDR39U1-218ENST00000556262 PRAMEF22A3QJZ6 481 aa23.58■■□□□ 1.37
SDR39U1-218ENST00000556262 GIGYF1O75420 1035 aaPredicted RBP23.58■■□□□ 1.36
SDR39U1-218ENST00000556262 ZNF790Q6PG37 636 aa23.58■■□□□ 1.36
SDR39U1-218ENST00000556262 DDX54Q8TDD1 881 aaKnown RBP23.58■■□□□ 1.36
SDR39U1-218ENST00000556262 HEG1Q9ULI3 1381 aa23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 NUTM2BA6NNL0 878 aaPredicted RBP23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 NUTM2EB1AL46 878 aaPredicted RBP23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 FKBP5Q13451 457 aaPredicted RBP23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 SLC4A10Q6U841 1118 aa23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 NUTM2AQ8IVF1 878 aaPredicted RBP23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 PHAXQ9H814 394 aaKnown RBP23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 CHPF2Q9P2E5 772 aa23.57■■□□□ 1.36
SDR39U1-218ENST00000556262 ERICH6Q7L0X2 663 aa23.56■■□□□ 1.36
SDR39U1-218ENST00000556262 SHANK3Q9BYB0 1731 aa23.56■■□□□ 1.36
SDR39U1-218ENST00000556262 RGS3P49796 1198 aa23.56■■□□□ 1.36
SDR39U1-218ENST00000556262 HDAC1Q13547 482 aaPredicted RBP23.56■■□□□ 1.36
SDR39U1-218ENST00000556262 CHMP4BQ9H444 224 aaKnown RBP23.56■■□□□ 1.36
SDR39U1-218ENST00000556262 MRC1P22897 1456 aa23.55■■□□□ 1.36
SDR39U1-218ENST00000556262 CABP4P57796 275 aa23.55■■□□□ 1.36
SDR39U1-218ENST00000556262 ANXA1P04083 346 aa23.54■■□□□ 1.36
SDR39U1-218ENST00000556262 PLCH1Q4KWH8 1693 aa23.52■■□□□ 1.36
SDR39U1-218ENST00000556262 ZNF496Q96IT1 587 aaPredicted RBP23.51■■□□□ 1.35
SDR39U1-218ENST00000556262 NKX1-1Q15270 411 aaPredicted RBP23.51■■□□□ 1.35
SDR39U1-218ENST00000556262 PDZRN3Q9UPQ7 1066 aa23.51■■□□□ 1.35
SDR39U1-218ENST00000556262 MEIS3Q99687 375 aa23.5■■□□□ 1.35
SDR39U1-218ENST00000556262 CHMP4AQ9BY43 222 aa23.5■■□□□ 1.35
SDR39U1-218ENST00000556262 CCT4P50991 539 aaKnown RBP23.49■■□□□ 1.35
SDR39U1-218ENST00000556262 PROSER3Q2NL68 480 aa23.49■■□□□ 1.35
SDR39U1-218ENST00000556262 SIRT2Q8IXJ6 389 aa23.49■■□□□ 1.35
SDR39U1-218ENST00000556262 TTC5Q8N0Z6 440 aa23.49■■□□□ 1.35
SDR39U1-218ENST00000556262 ANP32AP39687 249 aaKnown RBP23.49■■□□□ 1.35
SDR39U1-218ENST00000556262 DBF4Q9UBU7 674 aaPredicted RBP23.49■■□□□ 1.35
SDR39U1-218ENST00000556262 C5P01031 1676 aa23.48■■□□□ 1.35
SDR39U1-218ENST00000556262 DISP2A7MBM2 1401 aa23.47■■□□□ 1.35
SDR39U1-218ENST00000556262 ERVV-2B6SEH9 535 aa23.47■■□□□ 1.35
SDR39U1-218ENST00000556262 SMC5Q8IY18 1101 aa23.46■■□□□ 1.35
SDR39U1-218ENST00000556262 NRAPQ86VF7 1730 aa23.45■■□□□ 1.34
SDR39U1-218ENST00000556262 PDE4AP27815 886 aa23.45■■□□□ 1.34
SDR39U1-218ENST00000556262 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
SDR39U1-218ENST00000556262 PI4KAP2A4QPH2 592 aa23.44■■□□□ 1.34
SDR39U1-218ENST00000556262 PI4KAP1Q8N8J0 262 aa23.44■■□□□ 1.34
SDR39U1-218ENST00000556262 CERKQ8TCT0 537 aa23.44■■□□□ 1.34
SDR39U1-218ENST00000556262 PDIA6Q15084 440 aa23.43■■□□□ 1.34
SDR39U1-218ENST00000556262 USP16Q9Y5T5 823 aa23.43■■□□□ 1.34
SDR39U1-218ENST00000556262 TOGARAM1Q9Y4F4 1720 aa23.43■■□□□ 1.34
SDR39U1-218ENST00000556262 SNRPA1P09661 255 aaKnown RBP23.43■■□□□ 1.34
SDR39U1-218ENST00000556262 ATP10DQ9P241 1426 aa23.42■■□□□ 1.34
SDR39U1-218ENST00000556262 SPATA31A1Q5TZJ5 1347 aa23.42■■□□□ 1.34
SDR39U1-218ENST00000556262 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
SDR39U1-218ENST00000556262 PXDNLA1KZ92 1463 aa23.41■■□□□ 1.34
SDR39U1-218ENST00000556262 BACH2Q9BYV9 841 aa23.41■■□□□ 1.34
SDR39U1-218ENST00000556262 HYPKQ9NX55 129 aa23.41■■□□□ 1.34
SDR39U1-218ENST00000556262 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-218ENST00000556262 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
SDR39U1-218ENST00000556262 ADCY9O60503 1353 aa23.41■■□□□ 1.34
SDR39U1-218ENST00000556262 N4BP2Q86UW6 1770 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms