RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SOX12O15370 315 aa13.2□□□□□ -0.3
PRKCH-218ENST00000555628 IL2RBP14784 551 aa13.2□□□□□ -0.3
PRKCH-218ENST00000555628 OCEL1Q9H607 264 aa13.2□□□□□ -0.3
PRKCH-218ENST00000555628 EVC2Q86UK5 1308 aa13.19□□□□□ -0.3
PRKCH-218ENST00000555628 PLCG2P16885 1265 aa13.18□□□□□ -0.3
PRKCH-218ENST00000555628 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
PRKCH-218ENST00000555628 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
PRKCH-218ENST00000555628 POLD1P28340 1107 aa13.17□□□□□ -0.3
PRKCH-218ENST00000555628 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
PRKCH-218ENST00000555628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRKCH-218ENST00000555628 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
PRKCH-218ENST00000555628 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
PRKCH-218ENST00000555628 KCNQ4P56696 695 aa13.16□□□□□ -0.3
PRKCH-218ENST00000555628 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
PRKCH-218ENST00000555628 C5P01031 1676 aa13.15□□□□□ -0.3
PRKCH-218ENST00000555628 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-218ENST00000555628 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
PRKCH-218ENST00000555628 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
PRKCH-218ENST00000555628 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
PRKCH-218ENST00000555628 TAF1LQ8IZX4 1826 aa13.15□□□□□ -0.3
PRKCH-218ENST00000555628 MEGF6O75095 1541 aa13.14□□□□□ -0.31
PRKCH-218ENST00000555628 PCNTO95613 3336 aa13.14□□□□□ -0.31
PRKCH-218ENST00000555628 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
PRKCH-218ENST00000555628 NME9Q86XW9 330 aa13.14□□□□□ -0.31
PRKCH-218ENST00000555628 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
PRKCH-218ENST00000555628 STK25O00506 426 aa13.13□□□□□ -0.31
PRKCH-218ENST00000555628 HSPA6P17066 643 aa13.13□□□□□ -0.31
PRKCH-218ENST00000555628 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
PRKCH-218ENST00000555628 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-218ENST00000555628 EDC4Q6P2E9 1401 aaKnown RBP13.12□□□□□ -0.31
PRKCH-218ENST00000555628 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
PRKCH-218ENST00000555628 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
PRKCH-218ENST00000555628 L3MBTL2Q969R5 705 aa13.1□□□□□ -0.31
PRKCH-218ENST00000555628 CD2APQ9Y5K6 639 aa13.1□□□□□ -0.31
PRKCH-218ENST00000555628 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
PRKCH-218ENST00000555628 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
PRKCH-218ENST00000555628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKCH-218ENST00000555628 IP6K1Q92551 441 aa13.09□□□□□ -0.31
PRKCH-218ENST00000555628 A0A1W2PP64 1363 aa13.08□□□□□ -0.31
PRKCH-218ENST00000555628 KIF3CO14782 793 aa13.08□□□□□ -0.32
PRKCH-218ENST00000555628 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
PRKCH-218ENST00000555628 DDX54Q8TDD1 881 aaKnown RBP13.08□□□□□ -0.32
PRKCH-218ENST00000555628 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
PRKCH-218ENST00000555628 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
PRKCH-218ENST00000555628 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
PRKCH-218ENST00000555628 C4BP0C0L5 1744 aa13.08□□□□□ -0.32
PRKCH-218ENST00000555628 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
PRKCH-218ENST00000555628 MAP2P11137 1827 aaKnown RBP13.07□□□□□ -0.32
PRKCH-218ENST00000555628 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
PRKCH-218ENST00000555628 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
PRKCH-218ENST00000555628 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
PRKCH-218ENST00000555628 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
PRKCH-218ENST00000555628 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-218ENST00000555628 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
PRKCH-218ENST00000555628 USP47Q96K76 1375 aa13.04□□□□□ -0.32
PRKCH-218ENST00000555628 ITGB4P16144 1822 aa13.04□□□□□ -0.32
PRKCH-218ENST00000555628 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
PRKCH-218ENST00000555628 HOXC9P31274 260 aa13.03□□□□□ -0.32
PRKCH-218ENST00000555628 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
PRKCH-218ENST00000555628 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
PRKCH-218ENST00000555628 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
PRKCH-218ENST00000555628 ZNF526Q8TF50 670 aaPredicted RBP13.02□□□□□ -0.33
PRKCH-218ENST00000555628 IGSF1Q8N6C5 1336 aa13.02□□□□□ -0.33
PRKCH-218ENST00000555628 RTL1A6NKG5 1358 aa13.02□□□□□ -0.33
PRKCH-218ENST00000555628 PALLDQ8WX93 1383 aa13.02□□□□□ -0.33
PRKCH-218ENST00000555628 WDR90Q96KV7 1748 aa13.02□□□□□ -0.33
PRKCH-218ENST00000555628 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
PRKCH-218ENST00000555628 BRCA1P38398 1863 aaKnown RBP13.01□□□□□ -0.33
PRKCH-218ENST00000555628 PXDNLA1KZ92 1463 aa13□□□□□ -0.33
PRKCH-218ENST00000555628 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
PRKCH-218ENST00000555628 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
PRKCH-218ENST00000555628 MFRPQ9BY79 579 aa13□□□□□ -0.33
PRKCH-218ENST00000555628 SCUBE2Q9NQ36 999 aa13□□□□□ -0.33
PRKCH-218ENST00000555628 FBLN1P23142 703 aa12.99□□□□□ -0.33
PRKCH-218ENST00000555628 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
PRKCH-218ENST00000555628 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
PRKCH-218ENST00000555628 HS6ST3Q8IZP7 471 aa12.99□□□□□ -0.33
PRKCH-218ENST00000555628 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
PRKCH-218ENST00000555628 FLAD1Q8NFF5 587 aa12.99□□□□□ -0.33
PRKCH-218ENST00000555628 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
PRKCH-218ENST00000555628 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
PRKCH-218ENST00000555628 APLP1P51693 650 aa12.98□□□□□ -0.33
PRKCH-218ENST00000555628 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
PRKCH-218ENST00000555628 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
PRKCH-218ENST00000555628 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
PRKCH-218ENST00000555628 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
PRKCH-218ENST00000555628 CYP27B1O15528 508 aa12.96□□□□□ -0.33
PRKCH-218ENST00000555628 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
PRKCH-218ENST00000555628 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
PRKCH-218ENST00000555628 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.34
PRKCH-218ENST00000555628 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.34
PRKCH-218ENST00000555628 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
PRKCH-218ENST00000555628 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
PRKCH-218ENST00000555628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
PRKCH-218ENST00000555628 USHBP1Q8N6Y0 703 aa12.95□□□□□ -0.34
PRKCH-218ENST00000555628 TMC1Q8TDI8 760 aa12.95□□□□□ -0.34
PRKCH-218ENST00000555628 ANKRD26Q9UPS8 1709 aa12.95□□□□□ -0.34
PRKCH-218ENST00000555628 TOMM70O94826 608 aa12.94□□□□□ -0.34
PRKCH-218ENST00000555628 SSFA2P28290 1259 aa12.94□□□□□ -0.34
PRKCH-218ENST00000555628 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms