RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TBC1D2Q9BYX2 928 aa30.3■■■□□ 2.44
TMEM260-207ENST00000555497 PXDNQ92626 1479 aa30.29■■■□□ 2.44
TMEM260-207ENST00000555497 KCNQ3O43525 872 aa30.29■■■□□ 2.44
TMEM260-207ENST00000555497 USP35Q9P2H5 1018 aa30.29■■■□□ 2.44
TMEM260-207ENST00000555497 EIF4A1P60842 406 aaKnown RBP30.28■■■□□ 2.44
TMEM260-207ENST00000555497 NFKBIBQ15653 356 aa30.28■■■□□ 2.44
TMEM260-207ENST00000555497 MPRIPQ6WCQ1 1025 aa30.28■■■□□ 2.44
TMEM260-207ENST00000555497 KDM3BQ7LBC6 1761 aa30.28■■■□□ 2.44
TMEM260-207ENST00000555497 DEKP35659 375 aaKnown RBP30.28■■■□□ 2.44
TMEM260-207ENST00000555497 ATF3P18847 181 aa30.27■■■□□ 2.44
TMEM260-207ENST00000555497 HDGFL1Q5TGJ6 251 aa30.27■■■□□ 2.44
TMEM260-207ENST00000555497 ZC3H6P61129 1189 aaKnown RBP30.27■■■□□ 2.44
TMEM260-207ENST00000555497 CAMTA1Q9Y6Y1 1673 aa30.27■■■□□ 2.44
TMEM260-207ENST00000555497 GSPT1P15170 499 aaKnown RBP30.26■■■□□ 2.43
TMEM260-207ENST00000555497 OTUD7AQ8TE49 926 aaPredicted RBP30.26■■■□□ 2.43
TMEM260-207ENST00000555497 SMARCA5O60264 1052 aaPredicted RBP30.26■■■□□ 2.43
TMEM260-207ENST00000555497 AMOTQ4VCS5 1084 aa30.25■■■□□ 2.43
TMEM260-207ENST00000555497 PHAXQ9H814 394 aaKnown RBP30.25■■■□□ 2.43
TMEM260-207ENST00000555497 TBC1D9Q6ZT07 1266 aa30.24■■■□□ 2.43
TMEM260-207ENST00000555497 APBB1O00213 710 aa30.24■■■□□ 2.43
TMEM260-207ENST00000555497 RNMTO43148 476 aaKnown RBP30.23■■■□□ 2.43
TMEM260-207ENST00000555497 HSPA2P54652 639 aa30.23■■■□□ 2.43
TMEM260-207ENST00000555497 GNAI2P04899 355 aa30.22■■■□□ 2.43
TMEM260-207ENST00000555497 EIF2S2P20042 333 aaKnown RBP30.22■■■□□ 2.43
TMEM260-207ENST00000555497 TEFQ10587 303 aa30.22■■■□□ 2.43
TMEM260-207ENST00000555497 N4BP2Q86UW6 1770 aaPredicted RBP30.21■■■□□ 2.43
TMEM260-207ENST00000555497 RBM25P49756 843 aaKnown RBP30.21■■■□□ 2.43
TMEM260-207ENST00000555497 BTBD11A6QL63 1104 aa30.2■■■□□ 2.43
TMEM260-207ENST00000555497 C1orf141Q5JVX7 400 aa30.2■■■□□ 2.42
TMEM260-207ENST00000555497 ERBB3P21860 1342 aa30.2■■■□□ 2.42
TMEM260-207ENST00000555497 DCCP43146 1447 aa30.19■■■□□ 2.42
TMEM260-207ENST00000555497 TTC22Q5TAA0 569 aa30.19■■■□□ 2.42
TMEM260-207ENST00000555497 HMMRO75330 724 aa30.19■■■□□ 2.42
TMEM260-207ENST00000555497 SLKQ9H2G2 1235 aaPredicted RBP30.19■■■□□ 2.42
TMEM260-207ENST00000555497 ANTXR1Q9H6X2 564 aa30.18■■■□□ 2.42
TMEM260-207ENST00000555497 GNAI3P08754 354 aa30.17■■■□□ 2.42
TMEM260-207ENST00000555497 CHPF2Q9P2E5 772 aa30.17■■■□□ 2.42
TMEM260-207ENST00000555497 PXDNLA1KZ92 1463 aa30.17■■■□□ 2.42
TMEM260-207ENST00000555497 HOXB7P09629 217 aa30.16■■■□□ 2.42
TMEM260-207ENST00000555497 USP44Q9H0E7 712 aa30.16■■■□□ 2.42
TMEM260-207ENST00000555497 NCOA3Q9Y6Q9 1424 aa30.16■■■□□ 2.42
TMEM260-207ENST00000555497 CDC45O75419 566 aa30.15■■■□□ 2.42
TMEM260-207ENST00000555497 CABLES1Q8TDN4 633 aa30.15■■■□□ 2.42
TMEM260-207ENST00000555497 PNMA6EA0A0J9YXQ4 647 aa30.15■■■□□ 2.42
TMEM260-207ENST00000555497 FRAT2O75474 233 aaPredicted RBP30.14■■■□□ 2.41
TMEM260-207ENST00000555497 ANXA1P04083 346 aa30.13■■■□□ 2.41
TMEM260-207ENST00000555497 ATP8B2P98198 1209 aa30.13■■■□□ 2.41
TMEM260-207ENST00000555497 LRRFIP2Q9Y608 721 aaKnown RBP30.13■■■□□ 2.41
TMEM260-207ENST00000555497 OVOS2A0A0G2JMS6 1433 aa30.13■■■□□ 2.41
TMEM260-207ENST00000555497 COL18A1P39060 1754 aa30.13■■■□□ 2.41
TMEM260-207ENST00000555497 CADPS2Q86UW7 1296 aa30.12■■■□□ 2.41
TMEM260-207ENST00000555497 EXOC6BQ9Y2D4 811 aa30.12■■■□□ 2.41
TMEM260-207ENST00000555497 KIF2CQ99661 725 aa30.12■■■□□ 2.41
TMEM260-207ENST00000555497 SIPA1L3O60292 1781 aaPredicted RBP30.11■■■□□ 2.41
TMEM260-207ENST00000555497 SPRYD3Q8NCJ5 442 aa30.1■■■□□ 2.41
TMEM260-207ENST00000555497 NPHP3Q7Z494 1330 aa30.1■■■□□ 2.41
TMEM260-207ENST00000555497 NLRP2Q9NX02 1062 aa30.1■■■□□ 2.41
TMEM260-207ENST00000555497 CRYBG1Q9Y4K1 1723 aa30.09■■■□□ 2.41
TMEM260-207ENST00000555497 ADAMTS7Q9UKP4 1686 aa30.09■■■□□ 2.41
TMEM260-207ENST00000555497 XIRP1Q702N8 1843 aaKnown RBP30.09■■■□□ 2.41
TMEM260-207ENST00000555497 HEG1Q9ULI3 1381 aa30.09■■■□□ 2.41
TMEM260-207ENST00000555497 SDSP20132 328 aa30.08■■■□□ 2.41
TMEM260-207ENST00000555497 TNS3Q68CZ2 1445 aa30.08■■■□□ 2.41
TMEM260-207ENST00000555497 PRAMEF22A3QJZ6 481 aa30.07■■■□□ 2.4
TMEM260-207ENST00000555497 GIGYF1O75420 1035 aaPredicted RBP30.07■■■□□ 2.4
TMEM260-207ENST00000555497 PI4KAP2A4QPH2 592 aa30.07■■■□□ 2.4
TMEM260-207ENST00000555497 UBTFL1P0CB47 393 aaPredicted RBP30.07■■■□□ 2.4
TMEM260-207ENST00000555497 CHRNA2Q15822 529 aa30.07■■■□□ 2.4
TMEM260-207ENST00000555497 PI4KAP1Q8N8J0 262 aa30.07■■■□□ 2.4
TMEM260-207ENST00000555497 SRCIN1Q9C0H9 1055 aa30.07■■■□□ 2.4
TMEM260-207ENST00000555497 BEND3Q5T5X7 828 aa30.05■■■□□ 2.4
TMEM260-207ENST00000555497 DNAAF4Q8WXU2 420 aa30.05■■■□□ 2.4
TMEM260-207ENST00000555497 RAPGEF4Q8WZA2 1011 aa30.05■■■□□ 2.4
TMEM260-207ENST00000555497 ADCY9O60503 1353 aa30.04■■■□□ 2.4
TMEM260-207ENST00000555497 LMTK3Q96Q04 1460 aa30.04■■■□□ 2.4
TMEM260-207ENST00000555497 SPATA31A3Q5VYP0 1347 aa30.04■■■□□ 2.4
TMEM260-207ENST00000555497 PDE1AP54750 535 aa30.04■■■□□ 2.4
TMEM260-207ENST00000555497 PROSER3Q2NL68 480 aa30.04■■■□□ 2.4
TMEM260-207ENST00000555497 OSBPL3Q9H4L5 887 aa30.03■■■□□ 2.4
TMEM260-207ENST00000555497 MEGF6O75095 1541 aa30.03■■■□□ 2.4
TMEM260-207ENST00000555497 IBTKQ9P2D0 1353 aaPredicted RBP30.03■■■□□ 2.4
TMEM260-207ENST00000555497 CHMP4AQ9BY43 222 aa30.03■■■□□ 2.4
TMEM260-207ENST00000555497 SALL3Q9BXA9 1300 aa30.02■■■□□ 2.4
TMEM260-207ENST00000555497 SNX21Q969T3 373 aa30.02■■■□□ 2.4
TMEM260-207ENST00000555497 LRRCC1Q9C099 1032 aa30.02■■■□□ 2.4
TMEM260-207ENST00000555497 DBF4Q9UBU7 674 aaPredicted RBP30.02■■■□□ 2.4
TMEM260-207ENST00000555497 HSCBQ8IWL3 235 aa30.02■■■□□ 2.4
TMEM260-207ENST00000555497 KDM6AO15550 1401 aaPredicted RBP30.01■■■□□ 2.4
TMEM260-207ENST00000555497 NBPF7P0C2Y1 421 aaPredicted RBP30.01■■■□□ 2.39
TMEM260-207ENST00000555497 SCN11AQ9UI33 1791 aa30■■■□□ 2.39
TMEM260-207ENST00000555497 TATP17735 454 aaPredicted RBP30■■■□□ 2.39
TMEM260-207ENST00000555497 TSHZ3Q63HK5 1081 aa30■■■□□ 2.39
TMEM260-207ENST00000555497 SSH3Q8TE77 659 aa30■■■□□ 2.39
TMEM260-207ENST00000555497 CSB-PGBD3P0DP91 1061 aa29.99■■■□□ 2.39
TMEM260-207ENST00000555497 RBM42Q9BTD8 480 aaKnown RBP29.99■■■□□ 2.39
TMEM260-207ENST00000555497 PHKG2P15735 406 aa29.99■■■□□ 2.39
TMEM260-207ENST00000555497 BRINP3Q76B58 766 aa29.98■■■□□ 2.39
TMEM260-207ENST00000555497 CD2BP2O95400 341 aaKnown RBP29.98■■■□□ 2.39
TMEM260-207ENST00000555497 SLC39A6Q13433 755 aa29.98■■■□□ 2.39
TMEM260-207ENST00000555497 PPP1R42Q7Z4L9 355 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms